Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g093460.3.1
CDS Infomation	tRNA-pseudouridine synthase, putative (AHRD V3.3 *** B9S669_RICCO)
Sequence	ATGGCGAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATC TCTCAGCCACGCACCGTCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTCAAATCCCAT TCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAAATGATAATC TCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGCTTCCTTCCC AAGTCAAAACCTAATGATTCAGAACCCCTACCCGGTTCAGAACTTGGGTTCGACGATTGG GTCGACAGAAAATTGAATTTGAAATCTTCTTCTCCACAAGCCGAACCGCAGCCTGAAGAA CCCAATTCGGAGGATGAGAATAACAGGGACAAGGATAATGAGCTTGTTGAGTTGAAGCAG GAAGTTGTGGAGCTACCTACATTACACAAGAAGGAAGAAGAGTTGTACTTTTATGACAAT TTTGCTTATCCTTGGGAGAAGGATAAGCATTATAAGATGGTTTATCAATTGGAGAAGAAG TTTTTTCCTGATCAGGGTTTTGATAAGGCTTTTCTTGATCCTGGGCAGTCAAATGAGAAT GTAAACAGGAGTAAAAAGAAATTGGGGAAGAAGGAAAATTTAATAGAAAAAGATATTGAT GGTGGGGATGGTAAAAGTTTGATCTTTTTCGAAGAGGAAGAAAAAAGCGTCAGCTCTGAA ACTAAGAAGGAAGCTAAAGTTGATGTAGCGGAAAAGAAAGTGGAAGATTTCTTCAAGTGT TTGAAGAAAGTTCCAAATAAGGAAAATGGTGTTGTTAGTGCTGAGCCATTTCTAGCGACA AGGAGTACAGGGCTTCCTCCTAAATGGGATAGTCCGGGTGGGACAGTTGTATTAGTAAAC AAACCAAAAGGTTGGACTTCTTTTACTGTTTGTGGAAAGTTGCGTCGCTTAACAAAAGTG AAAAAGGTTGGCCATGCTGGAACACTTGATCCTATGGCAACTGGATTATTGATTGTATGT GTTGGTAAATCTACAAAGATCGTTGACAGCTATCAGGGTATGACTAAGGGCTACAGTGGG ATCTTCCGTTTGGGAGAAGCCACCTCTACCTGGGATGCAGATTCCCCGATAAATCTGGAA TGTGTGGCTTATTTCACCCACACGAAAGTCTCATTTAATCATCAGCAACACAAATTAAGA TGGAAAGATGAGAAATTTCGTGATAAAGCCATCATGAATAAAGTCTACACACTCACACTA GTTATTCAACGAGAGCCATGGGAGCATATCAAGGATGAGGACATAAAGAAAACGGCAGCA TCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCAATCAAACGTCATCAG AATTTCTCTTGGGTGACCAAGGTTGGTGGTGAAAAGATGTATGATAAAGCAAGAAGAGGA GAAAGCATCGAACTTGCACCAAGAAGGATTTCAATTTTCGAATTTGACGTGAAGCGGAGT TTAGATGACAGACAGAATGTGATTTTCCGAGTAAGATGCTCAAAAGGTACCTATGTCCGA TCACTTTGTGCAGACTTCGGGAAAGCTCTTGGCAGTTGTGCTCACTTGACAGCTCTGCGA CGAGATTCAATTGTTAGTCCTGAAAGTCTAGCTTGTCATGTTTACATACGAGAGGTCTGC ATTGCTGCCTGTGAGCAGATCGTAGTCAGGGTTTACAACAATATCAGTTCTGTTAACTCA AAGCAAGCATAG

Peptide Sequence

PEP ID	Solyc02g093460.3.1
PEP Infomation	tRNA-pseudouridine synthase, putative (AHRD V3.3 *** B9S669_RICCO)
Sequence	MAKSVVIPRMSLIFLRSKSISQPRTVFFPSMLNSLLLKSHSLHFFSTTSTPYPLQYEMII SRPANPPSPTLKSRQQRFLPKSKPNDSEPLPGSELGFDDWVDRKLNLKSSSPQAEPQPEE PNSEDENNRDKDNELVELKQEVVELPTLHKKEEELYFYDNFAYPWEKDKHYKMVYQLEKK FFPDQGFDKAFLDPGQSNENVNRSKKKLGKKENLIEKDIDGGDGKSLIFFEEEEKSVSSE TKKEAKVDVAEKKVEDFFKCLKKVPNKENGVVSAEPFLATRSTGLPPKWDSPGGTVVLVN KPKGWTSFTVCGKLRRLTKVKKVGHAGTLDPMATGLLIVCVGKSTKIVDSYQGMTKGYSG IFRLGEATSTWDADSPINLECVAYFTHTKVSFNHQQHKLRWKDEKFRDKAIMNKVYTLTL VIQREPWEHIKDEDIKKTAASFFGEIWQVPPMFSAIKRHQNFSWVTKVGGEKMYDKARRG ESIELAPRRISIFEFDVKRSLDDRQNVIFRVRCSKGTYVRSLCADFGKALGSCAHLTALR RDSIVSPESLACHVYIREVCIAACEQIVVRVYNNISSVNSKQA*

Transcript Sequence

Transcript ID	Solyc02g093460.3.1
Transcript Infomation	tRNA-pseudouridine synthase, putative (AHRD V3.3 *** B9S669_RICCO)
Sequence	ATGGCGAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATC TCTCAGCCACGCACCGTCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTCAAATCCCAT TCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAAATGATAATC TCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGCTTCCTTCCC AAGTCAAAACCTAATGATTCAGAACCCCTACCCGGTTCAGAACTTGGGTTCGACGATTGG GTCGACAGAAAATTGAATTTGAAATCTTCTTCTCCACAAGCCGAACCGCAGCCTGAAGAA CCCAATTCGGAGGATGAGAATAACAGGGACAAGGATAATGAGCTTGTTGAGTTGAAGCAG GAAGTTGTGGAGCTACCTACATTACACAAGAAGGAAGAAGAGTTGTACTTTTATGACAAT TTTGCTTATCCTTGGGAGAAGGATAAGCATTATAAGATGGTTTATCAATTGGAGAAGAAG TTTTTTCCTGATCAGGGTTTTGATAAGGCTTTTCTTGATCCTGGGCAGTCAAATGAGAAT GTAAACAGGAGTAAAAAGAAATTGGGGAAGAAGGAAAATTTAATAGAAAAAGATATTGAT GGTGGGGATGGTAAAAGTTTGATCTTTTTCGAAGAGGAAGAAAAAAGCGTCAGCTCTGAA ACTAAGAAGGAAGCTAAAGTTGATGTAGCGGAAAAGAAAGTGGAAGATTTCTTCAAGTGT TTGAAGAAAGTTCCAAATAAGGAAAATGGTGTTGTTAGTGCTGAGCCATTTCTAGCGACA AGGAGTACAGGGCTTCCTCCTAAATGGGATAGTCCGGGTGGGACAGTTGTATTAGTAAAC AAACCAAAAGGTTGGACTTCTTTTACTGTTTGTGGAAAGTTGCGTCGCTTAACAAAAGTG AAAAAGGTTGGCCATGCTGGAACACTTGATCCTATGGCAACTGGATTATTGATTGTATGT GTTGGTAAATCTACAAAGATCGTTGACAGCTATCAGGGTATGACTAAGGGCTACAGTGGG ATCTTCCGTTTGGGAGAAGCCACCTCTACCTGGGATGCAGATTCCCCGATAAATCTGGAA TGTGTGGCTTATTTCACCCACACGAAAGTCTCATTTAATCATCAGCAACACAAATTAAGA TGGAAAGATGAGAAATTTCGTGATAAAGCCATCATGAATAAAGTCTACACACTCACACTA GTTATTCAACGAGAGCCATGGGAGCATATCAAGGATGAGGACATAAAGAAAACGGCAGCA TCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCAATCAAACGTCATCAG AATTTCTCTTGGGTGACCAAGGTTGGTGGTGAAAAGATGTATGATAAAGCAAGAAGAGGA GAAAGCATCGAACTTGCACCAAGAAGGATTTCAATTTTCGAATTTGACGTGAAGCGGAGT TTAGATGACAGACAGAATGTGATTTTCCGAGTAAGATGCTCAAAAGGTACCTATGTCCGA TCACTTTGTGCAGACTTCGGGAAAGCTCTTGGCAGTTGTGCTCACTTGACAGCTCTGCGA CGAGATTCAATTGTTAGTCCTGAAAGTCTAGCTTGTCATGTTTACATACGAGAGGTCTGC ATTGCTGCCTGTGAGCAGATCGTAGTCAGGGTTTACAACAATATCAGTTCTGTTAACTCA AAGCAAGCATAG