Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093360.3.1
CDS Infomation

Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU)
Sequence

ATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCGAACGTTCACAATTCATTCGCTGCG
GTTGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCC
GAAAACAAAGAGGCATCTATCTCATATCCAATAGCGATGGACCTTGGTTCCACCGTAGCT
CATACTCAAACTGGATCAGTGACTGGTTCAAAGCATTTTAAAGCAAATGAAGATACTGTA
AATCAATCAGCAGAAGGTTGTTCAGGAGAACAGGTTTTGGCTTTGGAAACTGAATCATCT
ATCAAGGATTTACATCATGTTTCGAAAAATGGTACTTCAAACGATGATTTGAATGCGACT
GCCAAAGACTCAGGAATCACCTACTGTCCTAGTCCTCAAAACAGTTTTTATTCTGCTACA
CAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGTGAATGCGCTAGCAGC
ACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGCAACTCTTGTGATCTTGTTGAGAGC
AGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGACGTTAGTGATGAAAGCAGCTCT
AGTAGTTTCAATAGCACAGTATATAAACCACATAAGGCAAATGATACAAGGTGGGATGCA
ATACAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAACCACTTTAGACTGTTGAAG
AGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAGTTGATTGGCACAAGATGT
TTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGTCGCAAGAAACTCGTGAGA
GCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCCTTTCTACCAACACTGTAT
TCGCACTTTGAAACAGATAAATTTTCGTGCTTGGTGATGGAATTCTGCCCTGGTGGAGAT
TTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTCTTCCCGGAGCATGCTGCCAGGTTT
TACGTGGCTGAAGTCCTTCTTGCTCTAGAGTACTTGCACATGCTTGGAATCATTTACAGA
GACCTTAAACCAGAGAATGTTTTGGTTCGAGAAGATGGCCATATAATGCTTTCTGATTTT
GACCTCTCCTTGAGGTGTGCCGTGAGCCCAACTCTAGTTAGATCTTCAAATTCAAGCTTA
GAGTGCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATTGAGCCATCTTGTGTCGTA
CAGCCTGCATGTATACAACCTTCATGTTTTACACCACGTTTTCTAAGCAAGAACAAGAAA
GAAAAGAAGTCCAAACAAAAGACAGAAACATATAACCAAGTGAACCGGCCTCTTCCAGAA
CTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTGGGAACACATGAGTACCTA
GCTCCAGAAATTATAAAGGGTGAAGGACACGGCAGTGCTGTAGATTGGTGGACATTTGGG
ATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAAGGTGCAGGCAACAGGGCA
ACATTGTTTAACGTTGTTGGACAGCCCTTGAAATTTCCTGAAACACCTAGTGTTAGTTTT
GCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCACAACATCGCCTTGCATAT
AGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTCCAGAATGTGAACTGGGCACTT
ATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCCATGACATATGATATGCCC
CGAACACCACCAGCAGGAAAGGCCCCCGGACTTGATGTGAAGCCTTCAGGTAATTATTTT
GAGATTGATTTCTTCTGA

Peptide Sequence

PEP ID

Solyc02g093360.3.1
PEP Infomation

Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU)
Sequence

MESLVDGISSLPNVHNSFAAVECNTSLASKISHPPLMKQSENKEASISYPIAMDLGSTVA
HTQTGSVTGSKHFKANEDTVNQSAEGCSGEQVLALETESSIKDLHHVSKNGTSNDDLNAT
AKDSGITYCPSPQNSFYSATQYTEAKQSFSNTEVSECASSTVDKSGESGDVSNSCDLVES
RKTSFYRGSTGSDVSDESSSSSFNSTVYKPHKANDTRWDAIQVIRAREGTLGFNHFRLLK
RLGCGDIGSVFLAELIGTRCFFAMKVMDKAALESRKKLVRAQTEREILQSLDHPFLPTLY
SHFETDKFSCLVMEFCPGGDLHALRQKQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYR
DLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVRSSNSSLECKSSSYCVQPACIEPSCVV
QPACIQPSCFTPRFLSKNKKEKKSKQKTETYNQVNRPLPELLAEPTSARSMSFVGTHEYL
APEIIKGEGHGSAVDWWTFGIFLYELLFGQTPFKGAGNRATLFNVVGQPLKFPETPSVSF
AARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCTSPPDVPKPSSMTYDMP
RTPPAGKAPGLDVKPSGNYFEIDFF*

Transcript Sequence

Transcript ID

Solyc02g093360.3.1
Transcript Infomation

Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU)
Sequence

TCTTATGTATCAATTTCTTGACTAAGCTCTATTCTATTTCATTTGTTTGTTGTGAGTTTT
GTTTGATTGATTCATTTACTCTGTTTGTATCCAAATATAATAATTAGTCACTCACTCTTT
TTATTGTTACGATCGGATCTGAAAAAGGGAGAGGACCCAGAAAGAAAAAGGTGCAAAGCT
GTTACCCTTTTTAAGTGGAAAGGGTCTCAATAATCATGGCACATCATTCATTTTTCTCCA
TTTGATAATCAGTGTTTATACCAAAAAATTACAATGGAGTCTCTTGTTGATGGAATCAGT
TCCTTGCCGAACGTTCACAATTCATTCGCTGCGGTTGAGTGCAATACATCTTTGGCCTCC
AAGATAAGTCATCCTCCTTTGATGAAACAATCCGAAAACAAAGAGGCATCTATCTCATAT
CCAATAGCGATGGACCTTGGTTCCACCGTAGCTCATACTCAAACTGGATCAGTGACTGGT
TCAAAGCATTTTAAAGCAAATGAAGATACTGTAAATCAATCAGCAGAAGGTTGTTCAGGA
GAACAGGTTTTGGCTTTGGAAACTGAATCATCTATCAAGGATTTACATCATGTTTCGAAA
AATGGTACTTCAAACGATGATTTGAATGCGACTGCCAAAGACTCAGGAATCACCTACTGT
CCTAGTCCTCAAAACAGTTTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTT
TCCAACACAGAAGTCAGTGAATGCGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGT
GATGTTAGCAACTCTTGTGATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGC
ACAGGTAGTGACGTTAGTGATGAAAGCAGCTCTAGTAGTTTCAATAGCACAGTATATAAA
CCACATAAGGCAAATGATACAAGGTGGGATGCAATACAAGTTATTAGAGCCCGTGAGGGA
ACATTGGGTTTTAACCACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGT
GTTTTTCTAGCAGAGTTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAG
GCAGCTCTAGAAAGTCGCAAGAAACTCGTGAGAGCTCAAACGGAAAGAGAGATACTGCAG
TCTCTGGATCATCCCTTTCTACCAACACTGTATTCGCACTTTGAAACAGATAAATTTTCG
TGCTTGGTGATGGAATTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCA
GGAAAATTCTTCCCGGAGCATGCTGCCAGGTTTTACGTGGCTGAAGTCCTTCTTGCTCTA
GAGTACTTGCACATGCTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTTTGGTT
CGAGAAGATGGCCATATAATGCTTTCTGATTTTGACCTCTCCTTGAGGTGTGCCGTGAGC
CCAACTCTAGTTAGATCTTCAAATTCAAGCTTAGAGTGCAAGAGCTCATCATACTGTGTC
CAGCCTGCTTGTATTGAGCCATCTTGTGTCGTACAGCCTGCATGTATACAACCTTCATGT
TTTACACCACGTTTTCTAAGCAAGAACAAGAAAGAAAAGAAGTCCAAACAAAAGACAGAA
ACATATAACCAAGTGAACCGGCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGA
TCAATGTCTTTTGTGGGAACACATGAGTACCTAGCTCCAGAAATTATAAAGGGTGAAGGA
CACGGCAGTGCTGTAGATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGA
CAAACTCCTTTCAAAGGTGCAGGCAACAGGGCAACATTGTTTAACGTTGTTGGACAGCCC
TTGAAATTTCCTGAAACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTA
CTTGTGAAGGAGCCACAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAA
CATCCTTTCTTCCAGAATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTA
CCAAAGCCGTCCTCCATGACATATGATATGCCCCGAACACCACCAGCAGGAAAGGCCCCC
GGACTTGATGTGAAGCCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGAAGAATTCTT
TTCCTTGGCAGCAATGCCCCCATTGCCGTTCTACGAAGAGCTCAACGTTGAGGAAGACAC
AGTTTTTGTGTTCCTTTATGCTAATGTAAAGTGCATACTCTGTTGAAATGCAAGATGCAT
AGGAATTAGATGGTGAAGGCCATTTTTCTTTGTATAAGTATGTTGTTGATATTAATGAAG
AAGGCCTTGATGTGGCTATAAAGCTAGGCATTGCTGGATGTGATGTTTTAAAATTTTCAA
TTGAAGAATCAAAAGTTGATGTGCCATAATCCAGTCATTTAAAAAGTTGATGGCAATTAG
GAGTATTGGATGGAACTGCAAATGCGTAACAACAATAATGTTTTATTCTTAAACAAGTTA
GGGTCGACTCTATAATTCTTTTGGATGAATTAAAGAAAAATGTTTACTTTGATTTGGTAA
ACATAACTCAAAGAAAGTTTATTAAAACAGATGAATTTGGCACCTATGGTCCCCAAAGTA
TACAGTTGGACCATTTTCATAAACAATTCATTACTAAAAAGTGATTTCCATGGGGAAACA
TTTTGATGGATTTTCAAATTGGAAATTTCTTAACGATAACTCAGTTTTCATTACTTGCGA
CTCACATACTTTGTATTTATAAATGAGTCATTCTTCACCAATCCCATTAATTTTCTAGAC
CAAAAGTATCAAAGTTTGTACATCTAAAGGATTATGTTTCTTCAAATGTCACATAAGAAA
GATGAAAATAAATTGATTATCAGGGATCAATGATCATAGTGTATTTTTTTTATACCATTA
ACAATCAAGTAAATTTAATTGATTTTCATATTTAAATTTGAAAATATATACTGTATTATT
TAATTGATGGGAGTAAATATATAGTATTTTTTATTCTGTTATTTTGCTGGAGAATTGGTC
GTTGTCAAAATTATCATTTCTTCGAAGTCAGTGGCGGGTGTGCCTTGTTAGGCTTCCCAT
GCCTTTAAATCATTCTCTCTCCTCTTCAATCACATTTTGCTTGCACTTCTCTCCAAAACC
TTTCACTCGCTTTTCTGCACGAGCCCTAGTTAACGCCATGGCCGGAACACCGGAGAACTT
CTCCACCGACGCTACTGCCGACGCTGCCAACGCCGACGAGGACGTCAAGTTTGGGTTTCA
GCGTTCGGAGATGTACCAGAGTAAACTTGCAGGTACTACGACCTCCTATGATCGTCATCT
GTTCCTCTGTTACAAGTCTCACGAGACTTGGCCTGCTCGCCTTGAAGCTTCTGACTCCGA
TCTGCTTCCAAAGTCACTCTCTGCTGCTCTTAAAGCTCGCAAGGATGACATCAAAATCAA
GACTCTTTTGACAATATGCGAAGTACGTGATGACATGGAAGTATCAGAAGGAGATATTCT
GATTTTTCCTGAAATGATCAAATACAGGGATTTGAAGGAGTCAGATGTGGATGCATTTGT
TGATGATGTGCTTGTCAATGGCAATACTTGGAGCTCTGGATTGCAGGAGTCGCTGAGTGG
TTCTTATGTGTTTGTCTGTGCCCACAATCTTCGTGATCGAAGATGTGGTGTTTGTGGACC
TATTCTAATTGAGGAATTTAGCAAGCTCATTGAGTCCAAGAGCTTGAAAGACAAAGTTCG
TGTGACAGCTTGTTCTCATATTGGTGGCCACAAGTATGCTGGTAATGTTATAATCTTCAG
CTCAGGAAAGGACGGGAATATTGTTGGCCACTGGTATGGCTATGTTACGCCAAGTGATGT
ACCTGCTTTGCTTGATGAGCATATTGGAGAGGGAAAAGTCATTGAACGACTTTGGAGGGG
CCAAATGGGACAATATGAGAAGGTAACTGATAAAGTGGATGAACAGAAGGTTCCTGAAGT
AACCAATGAAGAAAAGAAGTCTCTTGAAAATGGAAAAAGCCAGGAGAGTAGTGTAACTAG
TTTCAGCTGTTGCCAAGGTGCTGCGGGAGTTTCTTGTTGTAGAGATGCAAGTGCTGAGCA
GAAAGAGAACAAGAAAGGGCAGGGAACAGTTTCAAACTGGTTCGGCAAATGGGAGCAGCG
TGAAATACTCGCAGCTGTAGGTGTGGTTGGAGCAGTGGCTGTTGTCGCTGTGGCTTATGG
CTTTTACAAGAAGTCACGGTGAAGCATGTTAACTTGGGACAAACTTTGTGCTCAAGAGTT
TTCGGGTATCTAGGTTTTGTAGAAAGGTAATAATGTTCGAGATAATCTCGGACACTGAAA
ATGCATACATATTTGGTATATTTAGAGAAAATTAAATGCAATGTGTAATTCGACTATGGA
GAGCAGCTCCTTTGCTCGTTCCCAGTAAGAACTAGAAGGGGTGATAAATATAAAGTGCCA
ACTAAGTGCTACATGTAGAATGATAGTTTTTACTTCTCTTGCTTGGGATTGAGGGTGATT
TTATGTGATGTGTTATGGGCAGATTTGCTTTTTTCTTCTTGTGAAACTGGTTGATATGAT
TGTCTTTTCAGCCCTTTGACCACCATGGAAAATAGACAGCTAGCAAACAGTAGCGTATTT
GGTGTCTTTACTTCATCGATGCAACCTAAGAAATGTTTGACATAGTTTTCGTCCTCTTAA
CTGTTGAGGTTGAGTTAAAATCACAGATGTCTACTCTTATGTATCAAACTTCAGAACTAT
ACAACTTTTTTCTGCACGATGCAGCAGAATGTTTGATTTAGGACCATAGATATGCTCATA
CGTCCCTGTGATATCCACTGTTGTGTAAAACAACGTGAGCCTCATTCCTAAAGTCTAACA
ACACTTTGGCCAGTTATCTTTTTCAATTCTCTCTCTTTAATTGGACCTCTAAGTTCAGCT
GCATCATCCCACTTCCCATCAACAGCATACACATTTGATAACAGGATGTAATATCCAGCA
TGATCTGGATCTAACTGGAGAAGATTCCTGGCAGCGACTTCTCCAATTTCTGCATTCTGA
TGAATTCTGCAAGCACCAAGCAAGGCCCCCCATACGTGTGCTCCAACCCGTGACTGCATT
TGGTTAATGAGGCACATAGCCTTGTCCAGCTCTCCGATTCGTCCAAGCAGGTCAACAATG
ATTGCATAATGCTTTGATTCTGGCATCAGTTCGTATTCATTTAACATCATATTGAAGAAT
TCAATTCCTTCCTCAACAAAACCTGCATGACTACAAGCTGCTAATATTGAAAGGAAGGTA
ACTTTGTTAGGACACACCGTGGTATCTGCAACCATACGATGAAATAACTTAATTGATTCC
CTAGCTTGCCCATGAATTCCGTAGCCAGCAAACATGGAGCTCCAGATAACAACATCTTTA
TCTGTTAAACTCTCAAAAACATTGATAGCCTCCTCCAAGCTACCACATTTTGCATAACAA
TCAATAACTGAAGATCCGATGAACGAATTGCTGATGAACCCACCTCTAATTACATAACTA
TGAAGACAAGAAGTCAATTGAAGAACCCCCAAATCAGAACAAGCTCCAAGAAGTTTAATA
ATCACAGTAGCATCAGGTTGGATATCGCTGGCCATCATATCACAAAATATTTGCATAGAC
TTGTTGGCCATTCCATTTTGAACACAACCACATAACAGAGCAAACCAAGAAACAGGATCT
TTGCTGGGCATCCTGTCAAATAAGAAAATCGCTTCCTGAGGTGAACAACAGCCCATGTAC
ATATCAATCAAAGTGGTGGAGACCAATATATCAAGTTCAAAACCTTTCTGCAAAGCTAAT
TTATGTATTTCCCTGCCTTTGTCTAAGTTACAACAAGCTTCACATGCTTGCAAAGCACTG
ATAACACATGCGACGTTGGGTTCAATTCCTTTATATATCATCTCATCAAAAAGACTTGTA
GCTCTATCAGTAGCATCATTATGAGCACAACATGAGATCATACAACTCCATGAGATAACA
TCTTTCTCCTCCATCACCCTAAACCAATTTCCTGCATAAAACATGGACCCAGATTTCGCA
TATAAGTTCAGCAGAGCGTTTGATAAAGAAAGGGAACTTTCATAACCCATTCGAAACACG
TGTGCATGAACACTTTTTCCAGCTTTTAAATTCAACAACTGAGTACAAGCAGAGACAACA
GTGACAAGAGTTATTGGGTCTGGACTAATGCAATGCGCCATCACCATTCCAGTAAAAACA
GCTAGTGCTTTATCAGGCTTAAAGTTCTTCTCATATCCAGTAACCAGAGTAGTCCATAAA
ACAATATCCGGTTTTAAATATTCCTCAAAGGCGCGAAAAGCATCGTCCATATCTCCACAT
CTCGAGTACATGTCAATGAGGCCTGATCCAAGAAACATGTTTGAATGAATTTTACCATAT
TTCTTCCCCAACCCATGAATTATTTTGCCAAAATTTGTAGCTTTTAATGCAGAACACGCC
TTCAATGCAAAGAGTAGAGTAAAATGATCAACCTTTTCGAATGAAAACATGGACGAAAAC
AGAGATAATACTTCCTCATATCGGTTCTTTCCACAGAAGCGTTGCAGAATGCGATTACAG
GTGTATATATTTGGGTGAGGAATTTCATCAAACAGCTTACGCGCAGTTTGAGCTGGCAAC
AACTCGAAATATAAGTCTGTTATTTTTGCAGCCAAGTGAGTGTCGTAAGTTCTGATAGTT
AAAGAATGCAATTGAGTGAGAAAATTGGTTGTTCTACATACTCCGACGACCTTCAAAACA
TGTTCCGGTGATCTCATAAGTGCCGTTCAATCAAACTGCATTTCGCCTGGTAAGTTTTTT
TTTATTTTCAAGTTCAAGTCCCAACAAAGAAAAGGTAGTTTTTTTAAATACTGAGTTTCG
ACAGGAACTCAAATTTAATCGAGTTTTGCTTTGCTACACAGTAGTAGATTAATAACCAGT
CATTATTTTTTAGATTTAAGAAAAAAGACTTAGCAAATCATAATTTTTTTGATTTAAGGA
AACAAAAAGAATACTTTACAAGTCATTCTTTTTTAGATTAAAGAAAAAAGACTTAGCAAA
TCATAATTTTTTTGATTTAAGGAAAAAAAAGAAGAAGACTTCCTTTTTAGATTAAAGAAA
AAAGACTTTCTAAATGAGATCAAGAAATTGAATCAGGATTCCTTCTGAATGAGAAATATT
TAAATAAGAATAAGTTGTAATAATCATGGTCAATTGCTCTCTAAATTCAAGAAATGAGAA
CAATTAAAAGTGTAATCATGATTACTTATCAATTATGGGGAATACGTTAAAAAGAATGAC
TTCTAAGTCACACTCAAATTGTTGGCAAAAAGTCAAGAAATGAAATTATTG