Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093290.3.1
CDS Infomation

Nicotinate phosphoribosyltransferase family protein (AHRD V3.3 *** B9H6H6_POPTR)
Sequence

ATGGCTGAAACTATACCTAATGGCGGGCCTGAGAGTGCCAATATTGATGGACCGACCAAT
CCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGG
AAAGCTGGAAAACACAATGAACGAGCTGTGTTTGACTTGTATTTTCGGAGGAATCCGTTT
GGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCTAATTTT
AAATTTACTGAGGATGAGATAGCTTTCATCAGGTCATCGTTGCCATCGTCATGTGAGGAT
GGCTTCTTTGAATACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCT
GAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCTGTG
GTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACT
AATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTT
AGGAGAGCACAGGGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGA
TTTGATGCGACAAGCAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACA
CATTCCCATGCCTTTGTTAGCTCATTTCTGAGCCCAGATGAGATCATAGAGAAATCACTT
CAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTT
GATAAATTAAAGTGGTCACACTTATTGGGTGGAATTTTCAGCGAGACAAATCAAAGTGAG
TTAGCCGCTTTCGCCTCGTATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGAC
ACTTATGATGTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAAT
GATTTGGGGTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCA
TGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGGTTTTGCA
AAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAA
CAAGGTCACGAGGTTGATGCATTTGGTATTGGTACTCATTTAGTTACCTGTTATGCTCAA
GCTGCTCTTGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTC
TCTGAAGACGTATCAAAGGTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGG
AAGGAAGGGTACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAGGTA
GGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCC
CAGCGTGTTGAGGAACTTTTAAAGTGTTTTTGGCCCGGAAAGTCAGCTAAAACAAGAGAA
GACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGCACAACTGGACCAAATGCGA
CCAGATCACATGAGAAGGCTGAACCCAACACCATACAAGGTCAGTGTGAGTGCAAAGTTG
TATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGAGAGTTGCAGTGA

Peptide Sequence

PEP ID

Solyc02g093290.3.1
PEP Infomation

Nicotinate phosphoribosyltransferase family protein (AHRD V3.3 *** B9H6H6_POPTR)
Sequence

MAETIPNGGPESANIDGPTNPMVTPILTDLYQFTMAYAYWKAGKHNERAVFDLYFRRNPF
GGEYTIFAGLEECIKFIANFKFTEDEIAFIRSSLPSSCEDGFFEYLRRLDCSDIEIYSIS
EGSVVFPKVPLMRIEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGRSKILLEFGL
RRAQGPDGGISASKYCYMGGFDATSNVAAGKLFGIPLRGTHSHAFVSSFLSPDEIIEKSL
QHHNGSSVCEDFVSLVQTWLDKLKWSHLLGGIFSETNQSELAAFASYALAFPGSFLALVD
TYDVMRSGLPNFCAVALALNDLGYKAVGIRLDSGDLAYQSCEARKFFCAIEKEFGLPGFA
KTSITASNDLNEETLDALNKQGHEVDAFGIGTHLVTCYAQAALGVVFKLVEINNQPRIKL
SEDVSKVSIPCKKRCYRLYGKEGYPLVDIMTGENEPHPKVGERILCRHPFSESKRAYVVP
QRVEELLKCFWPGKSAKTREDLPPLKEIRERCIAQLDQMRPDHMRRLNPTPYKVSVSAKL
YDFIHFLWLNEAPVGELQ*

Transcript Sequence

Transcript ID

Solyc02g093290.3.1
Transcript Infomation

Nicotinate phosphoribosyltransferase family protein (AHRD V3.3 *** B9H6H6_POPTR)
Sequence

AGGACCAAGTTGTTGTGTGGACTAGACTAGACAAGACAAGACAGTCCAATTCTTTGACAA
AAGTGTTGAATACTTTGGAGTCCAAAGTAACCCAAACATCAATCCAAGCCGCCAGGCGTT
AAGTGGAGTGCGCCTTTTCAGTATTCTCTAAAGTTAAAAAGAAGCAATGAATGAAGCTTT
ATTAAGTCCGATCTAATCCTTGGCGCTCTATATATTCTTAACAACTTCGTTTGTAACGGT
CTCAACATATTCTCTCTGTTCTGTAAAACCGAATTGCTGCTAACCCTAGGATTTATGGCT
GAAACTATACCTAATGGCGGGCCTGAGAGTGCCAATATTGATGGACCGACCAATCCTATG
GTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGGAAAGCT
GGAAAACACAATGAACGAGCTGTGTTTGACTTGTATTTTCGGAGGAATCCGTTTGGTGGT
GAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCTAATTTTAAATTT
ACTGAGGATGAGATAGCTTTCATCAGGTCATCGTTGCCATCGTCATGTGAGGATGGCTTC
TTTGAATACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCTGAAGGA
TCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCTGTGGTTCAA
CTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACTAATGCT
GCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTTAGGAGA
GCACAGGGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGATTTGAT
GCGACAAGCAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACACATTCC
CATGCCTTTGTTAGCTCATTTCTGAGCCCAGATGAGATCATAGAGAAATCACTTCAACAT
CATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTTGATAAA
TTAAAGTGGTCACACTTATTGGGTGGAATTTTCAGCGAGACAAATCAAAGTGAGTTAGCC
GCTTTCGCCTCGTATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGACACTTAT
GATGTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAATGATTTG
GGGTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCATGTGAA
GCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGGTTTTGCAAAGACG
AGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAACAAGGT
CACGAGGTTGATGCATTTGGTATTGGTACTCATTTAGTTACCTGTTATGCTCAAGCTGCT
CTTGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTCTCTGAA
GACGTATCAAAGGTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGGAAGGAA
GGGTACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAGGTAGGTGAA
CGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCCCAGCGT
GTTGAGGAACTTTTAAAGTGTTTTTGGCCCGGAAAGTCAGCTAAAACAAGAGAAGACCTT
CCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGCACAACTGGACCAAATGCGACCAGAT
CACATGAGAAGGCTGAACCCAACACCATACAAGGTCAGTGTGAGTGCAAAGTTGTATGAT
TTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGAGAGTTGCAGTGAACCATGAAT
GAGAAGTTTGGGAGTCTTCTAGGTTTCTTGTGCATCTTTTTCATCATGTAAACTGAAATT
TTACATAAAGTTATTAACCAAAGAGAAGTCCGTTCTTTACTTTTTCCCCCCAGTGATGTT
CCGAGGCAATTGTATAAGCTTCCTTGGAAGTTTGTAAAGGTCAATAAAAGTGCATTTGTA
TTTTCCTCTCAATTGAGTCCTCAGAAATGCGTGGATAAAACTGGGTGAAACCCATGTGCA
CCTTATAGTTGTGATTAATGTAACTGAGCCAAATTATTGTGACTAGAAAAGGTTTCAGTA
ATGATTATGGAATTTCATTCTTCTGAAATTGCTCTGCTAGTTGGTTCTCCTTGCCAACTA
CACATTTTTCAAACAATTTACACTGGACATTACAAAAAGTTACGGTATTAGCCTTGCTAG
AATG