Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093150.3.1
CDS Infomation

APETALA2c
Sequence

ATGTGGGATCTAAATGAATCAGAAGAAGGTTGTTCTTCACCGATAGAGTTTGAAGGCGAT
GATGAGAAAGGTAAACGGGTCGGATCCGTTTCGAATTCAAGTTCATCAGCTGTAGCTGTT
GATGATATATCTGAAGAGGAATTAGATGGAGAAAGAGGGAAGAAAAAGAGAGGTAAAATT
TTCGGCTTCTCTATGGTGGGTCTGGGTAACGGCGATGAAGAACAGCCGGTGACCCGACAG
TTTTTTCCGGTTGATGAGTCGGAAATGGGTGGTGTTGCTGCTGAAAATGGATGCCCGAAT
TTTCCCAGAGCTCACTGGGTTGGAGTTAAATTTTACCAAACGGAGACACTTGGCAACACG
GGATTGGCCAGGCCTGTAGATATGGTTCAGCAGCAACAGCAGCCTATTAAGAAGAGCCGC
CGTGGACCAAGGTCTAGAAGCTCACAGTACCGTGGGGTTACCTTCTACCGGAGAACTGGC
CGGTGGGAATCTCATATATGGGATTGTGGAAAACAAGTTTATCTAGGTGGATTTGATACT
GCTCATGCAGCAGCTCGGGCATACGATAGGGCAGCCATAAAATTCCGGGGAGTAGAAGCC
GACATAAACTTTAGCTTAGAAGATTATGAGTCCGATTTAAAACAGATGACAAGTTTAACA
AAGGAAGAATTTGTGCATGTGCTTCGAAGACAAAGTACTGGTTTTCCGAGGGGAAGCTCC
AAGTATAGAGGGGTGACTTTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGACAGTTC
TTAGGCAAAAAGTACGTTTATTTGGGACTCTTTGATACTGAGATTGAAGCTGCCAGAGCG
TATGATAAAGCTGCCATCAAGTGTAACGGGAAGGATGCAGTTACAAATTTTGATCCAAGC
ATTTATGAGAATGAACTAAACTCAATTGAATCTACCGATAACGTGGCTGATCATAATCTG
GATTTAAGTTTGGGTGGTTCAAGCTCAAAGCAAGGAAGTCAAGAATTGGGGGATAATAGA
GGTCAAAATTCTTCATCAATAATGCAATTGGATATTGATTGGCAGCGCCATGGTTTAAGG
CCTGAGAAGCAATCTGCCTTAATTGATGCTCGAAGAAGAGAAAACAGGTACAATGAAACA
GAAACGTTGCAACTTTTAAGCCAGACGCACTTGCATTCTCCAGCCTCCTTGAAGCATAAC
AATAATAATAATAGTCAAGTGCAACGGTTTGGCCAATTTATGAGACCTGGTGATCAATCC
CATATGATTCAAATGTTTCCACAGCAATTTGGCTCATCAAATTATCAAATTCAATTTCCA
AGTGGCAGCAATGGTGGAAGAATTGGAGCTACAAATGTAAGAGATCTATCGCTTGCGGCG
ACGAGTAATGGTTCTTCACAATGGCAATCCAATTTTCCTCCTCAGATATTTGTAGCTGCT
GCAGCATCATCAGGATTCCCTCAGCAGATAGTAAGACCTCAGAATTGGTCCTCAGAAAAT
GGTTTCCATCATTCACTCATGAGACCTTCTTGA

Peptide Sequence

PEP ID

Solyc02g093150.3.1
PEP Infomation

APETALA2c
Sequence

MWDLNESEEGCSSPIEFEGDDEKGKRVGSVSNSSSSAVAVDDISEEELDGERGKKKRGKI
FGFSMVGLGNGDEEQPVTRQFFPVDESEMGGVAAENGCPNFPRAHWVGVKFYQTETLGNT
GLARPVDMVQQQQQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDT
AHAAARAYDRAAIKFRGVEADINFSLEDYESDLKQMTSLTKEEFVHVLRRQSTGFPRGSS
KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPS
IYENELNSIESTDNVADHNLDLSLGGSSSKQGSQELGDNRGQNSSSIMQLDIDWQRHGLR
PEKQSALIDARRRENRYNETETLQLLSQTHLHSPASLKHNNNNNSQVQRFGQFMRPGDQS
HMIQMFPQQFGSSNYQIQFPSGSNGGRIGATNVRDLSLAATSNGSSQWQSNFPPQIFVAA
AASSGFPQQIVRPQNWSSENGFHHSLMRPS*

Transcript Sequence

Transcript ID

Solyc02g093150.3.1
Transcript Infomation

APETALA2c
Sequence

ATAGAGGAGAATATTTAAAAGTCTAGGAAACTCAAAACAAGTCCTTTTGTAGCAATAGCC
AAAAAATTAAATTGTTTTCTGTTTTTATAATTTGGATTGGGTATTTTTTGTAGAGAGAAA
AATGTGGGATCTAAATGAATCAGAAGAAGGTTGTTCTTCACCGATAGAGTTTGAAGGCGA
TGATGAGAAAGGTAAACGGGTCGGATCCGTTTCGAATTCAAGTTCATCAGCTGTAGCTGT
TGATGATATATCTGAAGAGGAATTAGATGGAGAAAGAGGGAAGAAAAAGAGAGGTAAAAT
TTTCGGCTTCTCTATGGTGGGTCTGGGTAACGGCGATGAAGAACAGCCGGTGACCCGACA
GTTTTTTCCGGTTGATGAGTCGGAAATGGGTGGTGTTGCTGCTGAAAATGGATGCCCGAA
TTTTCCCAGAGCTCACTGGGTTGGAGTTAAATTTTACCAAACGGAGACACTTGGCAACAC
GGGATTGGCCAGGCCTGTAGATATGGTTCAGCAGCAACAGCAGCCTATTAAGAAGAGCCG
CCGTGGACCAAGGTCTAGAAGCTCACAGTACCGTGGGGTTACCTTCTACCGGAGAACTGG
CCGGTGGGAATCTCATATATGGGATTGTGGAAAACAAGTTTATCTAGGTGGATTTGATAC
TGCTCATGCAGCAGCTCGGGCATACGATAGGGCAGCCATAAAATTCCGGGGAGTAGAAGC
CGACATAAACTTTAGCTTAGAAGATTATGAGTCCGATTTAAAACAGATGACAAGTTTAAC
AAAGGAAGAATTTGTGCATGTGCTTCGAAGACAAAGTACTGGTTTTCCGAGGGGAAGCTC
CAAGTATAGAGGGGTGACTTTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGACAGTT
CTTAGGCAAAAAGTACGTTTATTTGGGACTCTTTGATACTGAGATTGAAGCTGCCAGAGC
GTATGATAAAGCTGCCATCAAGTGTAACGGGAAGGATGCAGTTACAAATTTTGATCCAAG
CATTTATGAGAATGAACTAAACTCAATTGAATCTACCGATAACGTGGCTGATCATAATCT
GGATTTAAGTTTGGGTGGTTCAAGCTCAAAGCAAGGAAGTCAAGAATTGGGGGATAATAG
AGGTCAAAATTCTTCATCAATAATGCAATTGGATATTGATTGGCAGCGCCATGGTTTAAG
GCCTGAGAAGCAATCTGCCTTAATTGATGCTCGAAGAAGAGAAAACAGGTACAATGAAAC
AGAAACGTTGCAACTTTTAAGCCAGACGCACTTGCATTCTCCAGCCTCCTTGAAGCATAA
CAATAATAATAATAGTCAAGTGCAACGGTTTGGCCAATTTATGAGACCTGGTGATCAATC
CCATATGATTCAAATGTTTCCACAGCAATTTGGCTCATCAAATTATCAAATTCAATTTCC
AAGTGGCAGCAATGGTGGAAGAATTGGAGCTACAAATGTAAGAGATCTATCGCTTGCGGC
GACGAGTAATGGTTCTTCACAATGGCAATCCAATTTTCCTCCTCAGATATTTGTAGCTGC
TGCAGCATCATCAGGATTCCCTCAGCAGATAGTAAGACCTCAGAATTGGTCCTCAGAAAA
TGGTTTCCATCATTCACTCATGAGACCTTCTTGACTCATTTAATAACTTGCCATATTTCT
ATTTGTGTTTTTTTTAAGATAATGTGTAGATTAAAGGGTTGATATTCTTAATACTCCATA
TATATTACCTAAGGCTCTTGGTTTGAAATTAGAAAAGAAAAAAAAAGGTAGACAAAATGT
TTTGGAAAATATGTCTCCTCGTTAATTTGTCCAATACTAACTGATCGGCAAGCTTTTCAA
CTAGACTTGTATTAGTTTATTCTGACTATGAACTGCCAATTTGGCCCATTCTCTCTCATT
GTAACTTGTATACATTTGGGCTCTAGCTTCTCATGTAGTATTTGAAATACTATAATTTAT
TATTCCTTTGTTTTTGTTTTTCTTGTAACAAAAGTCCAACTACTATGTCTACTAATATAT
GAAAAATTTTAACTTTTTAAA