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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093070.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G50210.4)
Sequence

ATGGTTATGGATTTCAAGTCTATCCCTCTAATAGATATAAGTGCTCTTTTGGAGAAGTGG
GATCATCCAAATGTGGCCCAAGATGAAGGTGTAGCTCAAGTTGTTAGACAATTAGATCAT
GCTTGTAGACATGCTGGATTCTTTTATGTGAAAGGGCATGGCATCCCTATTTCCCTTATG
GAGGAGATCAGAAGTGTTTCGCGCGAATATTTTTATCAACCCTATGAAGAGAAAATCAAG
ATCAAACTTTCTGCAGCAACTGGATACAGAGGATATCAAAGATTTCGAGAAAATATAACT
AAAGGCATACCTGATATGCAAGAAGCTATTGATTTCTATAGAGAAGTAAAACATGGGATG
TATGGAGATCTTGGAGAAGTTATGCAAGGATCCAACATATGGCCAAGTAACCCTTCAAAG
TTCAAAAAGTTGATGGAGCTTTATATTGATCTTTGCACAGATGTATCGCGTAAGATAATG
AGGGGAATTGGTCTAGCGTTGGGTGGATCAGCAGATGAAATGGAAGGGAAAATAGCTGGT
GATCCATTTTGGGTCTTGCGAACAATTGGTTACCCTGCTTCATCCATCTTAGATGAACAT
GATAAGGCTAATGATGTTGTTGGATGTGGAGAGCATACAGACTATGGACTATTGACATTA
CTCAACCAAGATGATGACATAGTTGCACTTCAGGTGAAAAACAAATCTGGTGAGTGGATA
TCAGCACCACCAGTTCCTGGAACATTTGTCTGCAATATAGGAGATATGTTGAAGATCTTA
TCAAATGGAATTTATGAATCAACGTTGCACCGTGTCATCAATAACACTCCCAGATATCGT
GTGTGTGTAGCCTACTTTTATGAGCCCAACTTCGATGCTGCAGTAGAGCCATTGGATGTG
TGTTCACAGAAGACGGGTGGCACCAAGAGTTTTGAAGGAGCTGTTTATGGGAAGCATTTG
GTCAGCAAAGTCCTCAACAATTTTGTGATGTAG

Peptide Sequence

PEP ID

Solyc02g093070.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G50210.4)
Sequence

MVMDFKSIPLIDISALLEKWDHPNVAQDEGVAQVVRQLDHACRHAGFFYVKGHGIPISLM
EEIRSVSREYFYQPYEEKIKIKLSAATGYRGYQRFRENITKGIPDMQEAIDFYREVKHGM
YGDLGEVMQGSNIWPSNPSKFKKLMELYIDLCTDVSRKIMRGIGLALGGSADEMEGKIAG
DPFWVLRTIGYPASSILDEHDKANDVVGCGEHTDYGLLTLLNQDDDIVALQVKNKSGEWI
SAPPVPGTFVCNIGDMLKILSNGIYESTLHRVINNTPRYRVCVAYFYEPNFDAAVEPLDV
CSQKTGGTKSFEGAVYGKHLVSKVLNNFVM*

Transcript Sequence

Transcript ID

Solyc02g093070.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G50210.4)
Sequence

GTAGTAATGTTGAATGAAACATAATAATATACTCAGAAATCAGAAGCATCATGGTTATGG
ATTTCAAGTCTATCCCTCTAATAGATATAAGTGCTCTTTTGGAGAAGTGGGATCATCCAA
ATGTGGCCCAAGATGAAGGTGTAGCTCAAGTTGTTAGACAATTAGATCATGCTTGTAGAC
ATGCTGGATTCTTTTATGTGAAAGGGCATGGCATCCCTATTTCCCTTATGGAGGAGATCA
GAAGTGTTTCGCGCGAATATTTTTATCAACCCTATGAAGAGAAAATCAAGATCAAACTTT
CTGCAGCAACTGGATACAGAGGATATCAAAGATTTCGAGAAAATATAACTAAAGGCATAC
CTGATATGCAAGAAGCTATTGATTTCTATAGAGAAGTAAAACATGGGATGTATGGAGATC
TTGGAGAAGTTATGCAAGGATCCAACATATGGCCAAGTAACCCTTCAAAGTTCAAAAAGT
TGATGGAGCTTTATATTGATCTTTGCACAGATGTATCGCGTAAGATAATGAGGGGAATTG
GTCTAGCGTTGGGTGGATCAGCAGATGAAATGGAAGGGAAAATAGCTGGTGATCCATTTT
GGGTCTTGCGAACAATTGGTTACCCTGCTTCATCCATCTTAGATGAACATGATAAGGCTA
ATGATGTTGTTGGATGTGGAGAGCATACAGACTATGGACTATTGACATTACTCAACCAAG
ATGATGACATAGTTGCACTTCAGGTGAAAAACAAATCTGGTGAGTGGATATCAGCACCAC
CAGTTCCTGGAACATTTGTCTGCAATATAGGAGATATGTTGAAGATCTTATCAAATGGAA
TTTATGAATCAACGTTGCACCGTGTCATCAATAACACTCCCAGATATCGTGTGTGTGTAG
CCTACTTTTATGAGCCCAACTTCGATGCTGCAGTAGAGCCATTGGATGTGTGTTCACAGA
AGACGGGTGGCACCAAGAGTTTTGAAGGAGCTGTTTATGGGAAGCATTTGGTCAGCAAAG
TCCTCAACAATTTTGTGATGTAGACACTGAGCAAGTCTGAATGTGTCTCCTCTTTTCTTT
ACCATAAAAATAA