Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093040.3.1
CDS Infomation

Cysteine protease, putative (AHRD V3.3 *** B9SFZ3_RICCO)
Sequence

ATGGCTAAAACCTTAATAACTACTCTTCTCTTAGCCCTGTTTTCGTCTTTATCCTATGCA
ATTGACATGTCCATCATAGATCACAAAAATAAAGAGGGTATTTTATACGAAAAGTGGCTG
GCAGAGCATGGAAAAATATATAATGCCTTGGGTGAGAAGGAAAAAAGATTCGAGATTTTT
AAAGATAATTTGAGGTTCATCGAGGAATATAATGCCTCCGAAAATCGCACGTTTAAAGTT
GGATTGAACCAATTTGCTGATCTCACGAACGACGAGTACCGGGCTGTGTATTTGGGCACG
AAAAGTGACGCTAGGCGTCGCCTTGTCAAGTCCAAAAACACAAGCCAGCGTTATGCTTCG
CCGCCCAATGAGTTGCTCCCTCATTCCGTTGATTGGAGGAAGAAAGGCGCTGTTGCTCCT
ATCAAAAATCAAGGGAGCTGTGGAAGTTGCTGGGCTTTTTCAACAGTGGCAGCAGTAGAA
GGCATAAACCAAATCGTAACAGGGGAGATGATCACACTATCCGAGCAAGAACTTGTAGAT
TGTGACAGATCTCAAAACGGTGGTTGTAATGGTGGCCTAATGGACTATGCCTTCGAGTTC
ATCATCTCCAATGGTGGCATGGACACTGAAAATCACTATCCTTATCGCGGCGTTGATGGT
AGATGCGATCCTATTCGGAAAAATTCAAAAGTTGTTAGTATTGATGATTATGAAGACGTG
CCTAGAAATGAAAAAGCACTTCAAAAAGCTGTAGCTCATCAACCTGTTAGCGTAGCCATC
GAAGCTTCTGGGAAGGCTTTCCAACTCTACACCTCGGGCGTGTTTACGGGGGATTGTGGA
GAGAAAGTAGACCATGGTGTTGTGGTGGTTGGGTACGGAAGTGAAGATGGAAATGACTAT
TGGTTAGTGAGGAACTCATGGGGCACAAAGTGGGGAGAAAGTGGTTATGTTAAAATGGAG
CGTAATGTGAAGAATGGTCATTTGGGCAAGTGTGGAATTATGACGGAGGCTTCATATCCT
ATTAAGGAGGCTATAAATAAACTTAGATGGTGGAAGCTAATGGTTGGTTATGTAAAGACT
ACACCCATGTATGTTGAGTCGATGAATGAGATGCTTAGAAGGATTTGTCGGCGCAACTTC
TGCACTTGCTCTCCTCGGCCGTGGCTCTTTGTTGGGTTGGGAAATCCTGGGGATAAATAC
AGGGGAACGAGACATAATGTTGGTTTTGAAATGCTTGATGCATTCGCAAATTCACAAGGG
ATTCATATGGAGACAATACATTGTAAAGCTATGTTTGGAAAAGGTTTTGTCAATGGTATG
CCAGTTCTCCTTGCAAAGCCACTGACTTACATGAATTTGAGTGGTGAATCCATTGGCCCA
CTTGCAGCATATTACAAGCTCCCTCTCAATCGTGTGGTCGTGTTTCATGATGACATGGAT
TTACCATGTGGAGTTCTTCGTCTTCACCCCAAGGGAGGTCATAACAGACATAACGGGTTA
AAGAGTGTGATGTATCATTTTCGTGGAAATGGAGAGTTTCCTCGGTTAAGGATAGGTATT
GGAAGACCTCCTGGTCAGATGGATCCCAAAGCATTCATGCTTCAAAAGTTCAATTTAACT
GCAAGAGAACGAGGGCACTGTGCCGACATGGCTGATTGTATATATCATTTTCTGCTCTTA
TCTTTCTTTGTCTCTGAGATTGATGCTGCATTACTGGAGGGAGCACATGCATTGGAGCAA
GTCTTATCCAAAGGCTTCTCCGAAAGTTCTAATTGTTTCAATACAACGCAGAAGTACAAG
CACATACGATTGCAGACATTGCCAACGTGA

Peptide Sequence

PEP ID

Solyc02g093040.3.1
PEP Infomation

Cysteine protease, putative (AHRD V3.3 *** B9SFZ3_RICCO)
Sequence

MAKTLITTLLLALFSSLSYAIDMSIIDHKNKEGILYEKWLAEHGKIYNALGEKEKRFEIF
KDNLRFIEEYNASENRTFKVGLNQFADLTNDEYRAVYLGTKSDARRRLVKSKNTSQRYAS
PPNELLPHSVDWRKKGAVAPIKNQGSCGSCWAFSTVAAVEGINQIVTGEMITLSEQELVD
CDRSQNGGCNGGLMDYAFEFIISNGGMDTENHYPYRGVDGRCDPIRKNSKVVSIDDYEDV
PRNEKALQKAVAHQPVSVAIEASGKAFQLYTSGVFTGDCGEKVDHGVVVVGYGSEDGNDY
WLVRNSWGTKWGESGYVKMERNVKNGHLGKCGIMTEASYPIKEAINKLRWWKLMVGYVKT
TPMYVESMNEMLRRICRRNFCTCSPRPWLFVGLGNPGDKYRGTRHNVGFEMLDAFANSQG
IHMETIHCKAMFGKGFVNGMPVLLAKPLTYMNLSGESIGPLAAYYKLPLNRVVVFHDDMD
LPCGVLRLHPKGGHNRHNGLKSVMYHFRGNGEFPRLRIGIGRPPGQMDPKAFMLQKFNLT
ARERGHCADMADCIYHFLLLSFFVSEIDAALLEGAHALEQVLSKGFSESSNCFNTTQKYK
HIRLQTLPT*

Transcript Sequence

Transcript ID

Solyc02g093040.3.1
Transcript Infomation

Cysteine protease, putative (AHRD V3.3 *** B9SFZ3_RICCO)
Sequence

CTTCTCCCTACTACAAGTGTTAAAGTTTTGTTTTGCACTTTGTCAGCCATGGCTAAAACC
TTAATAACTACTCTTCTCTTAGCCCTGTTTTCGTCTTTATCCTATGCAATTGACATGTCC
ATCATAGATCACAAAAATAAAGAGGGTATTTTATACGAAAAGTGGCTGGCAGAGCATGGA
AAAATATATAATGCCTTGGGTGAGAAGGAAAAAAGATTCGAGATTTTTAAAGATAATTTG
AGGTTCATCGAGGAATATAATGCCTCCGAAAATCGCACGTTTAAAGTTGGATTGAACCAA
TTTGCTGATCTCACGAACGACGAGTACCGGGCTGTGTATTTGGGCACGAAAAGTGACGCT
AGGCGTCGCCTTGTCAAGTCCAAAAACACAAGCCAGCGTTATGCTTCGCCGCCCAATGAG
TTGCTCCCTCATTCCGTTGATTGGAGGAAGAAAGGCGCTGTTGCTCCTATCAAAAATCAA
GGGAGCTGTGGAAGTTGCTGGGCTTTTTCAACAGTGGCAGCAGTAGAAGGCATAAACCAA
ATCGTAACAGGGGAGATGATCACACTATCCGAGCAAGAACTTGTAGATTGTGACAGATCT
CAAAACGGTGGTTGTAATGGTGGCCTAATGGACTATGCCTTCGAGTTCATCATCTCCAAT
GGTGGCATGGACACTGAAAATCACTATCCTTATCGCGGCGTTGATGGTAGATGCGATCCT
ATTCGGAAAAATTCAAAAGTTGTTAGTATTGATGATTATGAAGACGTGCCTAGAAATGAA
AAAGCACTTCAAAAAGCTGTAGCTCATCAACCTGTTAGCGTAGCCATCGAAGCTTCTGGG
AAGGCTTTCCAACTCTACACCTCGGGCGTGTTTACGGGGGATTGTGGAGAGAAAGTAGAC
CATGGTGTTGTGGTGGTTGGGTACGGAAGTGAAGATGGAAATGACTATTGGTTAGTGAGG
AACTCATGGGGCACAAAGTGGGGAGAAAGTGGTTATGTTAAAATGGAGCGTAATGTGAAG
AATGGTCATTTGGGCAAGTGTGGAATTATGACGGAGGCTTCATATCCTATTAAGGAGGCT
ATAAATAAACTTAGATGGTGGAAGCTAATGGTTGGTTATGTAAAGACTACACCCATGTAT
GTTGAGTCGATGAATGAGATGCTTAGAAGGATTTGTCGGCGCAACTTCTGCACTTGCTCT
CCTCGGCCGTGGCTCTTTGTTGGGTTGGGAAATCCTGGGGATAAATACAGGGGAACGAGA
CATAATGTTGGTTTTGAAATGCTTGATGCATTCGCAAATTCACAAGGGATTCATATGGAG
ACAATACATTGTAAAGCTATGTTTGGAAAAGGTTTTGTCAATGGTATGCCAGTTCTCCTT
GCAAAGCCACTGACTTACATGAATTTGAGTGGTGAATCCATTGGCCCACTTGCAGCATAT
TACAAGCTCCCTCTCAATCGTGTGGTCGTGTTTCATGATGACATGGATTTACCATGTGGA
GTTCTTCGTCTTCACCCCAAGGGAGGTCATAACAGACATAACGGGTTAAAGAGTGTGATG
TATCATTTTCGTGGAAATGGAGAGTTTCCTCGGTTAAGGATAGGTATTGGAAGACCTCCT
GGTCAGATGGATCCCAAAGCATTCATGCTTCAAAAGTTCAATTTAACTGCAAGAGAACGA
GGGCACTGTGCCGACATGGCTGATTGTATATATCATTTTCTGCTCTTATCTTTCTTTGTC
TCTGAGATTGATGCTGCATTACTGGAGGGAGCACATGCATTGGAGCAAGTCTTATCCAAA
GGCTTCTCCGAAAGTTCTAATTGTTTCAATACAACGCAGAAGTACAAGCACATACGATTG
CAGACATTGCCAACGTGA