Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g092820.3.1
CDS Infomation

IAA-amido synthetase 3-4
Sequence

ATGGCAGGGGCATCCTGGTTCAACATTAATGGTGCTATTGACCGTGAAACTTTCAAGTCT
AAGGTCCCCGTTGTTACATACGAGGATCTTAAACCTGATATTGATCGTATTGCTAATGGT
GATCGTTCTCCCATTTTCTCATCACACCCTATCTCCGAATTCCTTACCAGTTCGGGGACG
TCTGCTGGAGAGAGAAAACTGATGCCCACAATTGCGGATGAGCTAGAACGCAGACAAAAA
CTGTACAACCTTCTACAGCCCGTGATGAATCTGTATGTGCCTGGTTTAGATAAGGGGAAG
GGATTGTACTTTCTATTTATCAAGGCAGAAACGAAGACGCCTAGTGGCCTTGTTGCACGT
CCAGTCCTAACAAGTTACTACAAAAGTGAACAATTCAAGACAAGGCCATACGATCCATAC
AATGTGTATACAAGCCCCAACGAGACCATTCTCTGTGTCGATTCATTCCAAAGCATGTAT
TCCCAAATGCTTTGTGGCCTTCTCATGAGAGAAGAAGTCCTCCGAGTTGGTGCTGTTTTT
GCCTCTGGCTTACTCCGTGCCATCCGTTTTCTTCAACTCAATTGGAAGCAATTGTCTCAG
GATATCGCGTCTGGAACTCTAAACCCTAGAGTTTCAGACCCGTCTATCCGAAATTGCATT
TCCCAAATACTCAAACCAAATCCCCAACTTGCTGAGTTTGTTGCTAAGGAATGTGAAGGC
GAAAATTGGGAAGGAATCATTACTAGAATTTGGCCAAACACAAAGCACCTTGATGTGATA
GTCACAGGTGCAATGGCTCAATATATACCTACTTTGGATTATTATAGTGGGGGTCTACCA
AAGGTGTGTACAATGTACGCATCATCCGAATGTTATTTTGGACTCAATTTAAATCCATTG
TGTAAGCCTTGTGAAGTTTGTTACACCATTATGCCAAATATGGGTTACTTTGAATTCATC
CCTCATGACCCGGTCAACCCGGTTCAAATCTCTCGTGACTCACCCCCACATCTAGTAGAC
CTTGCTGACGTGGAAATTGGAAAAGAATACGAGCTCGTGATCACAACTTACGCCGGACTA
TGCCGTTACCGAGTTGGTGACATACTCCAGGTCACCGGGTTCCACAACTCGGCCCCTCAG
TTCAAATTCGTCAGGCGAAAAAACGTGCTGTTGAGTATTGATTCTGATAAAACCGATGAG
TCCGAATTACACACCGCGATTGAAAATGCGACCGCACTTTTGCGCCCGTATGATACTACT
TTAGTTGAGTACACCAGTTTTGCCGATACTAAGACAATTCCGGGGCATTACGTTATTTAC
TGGGAGTTACTTGTTAAGGACCCGGCTAACCCACCCAGTGATGACGTGTTGAACCAGTGC
TGCCTTGCGATGGAACAATCATTGAACTCGGTGTACAGGCAGTGTCGCGTCGCAGACAAT
TCAATCGGGCCACTGGAGATAAGAGTGGTGAAAAACGGGACATTTGAAGAACTTATGGAT
TATGCAATTTCGAGAGGTGCATCAATTAATCAGTATAAGGCACCAAGGTGTGTTAATTTT
ACTCCTATTGTTGAACTTTTGGACTCCAGGGTGATTTCTGTGAATTTCAGTCCAAAAGCT
CCTCACTGGACTCCAGAACGACGACGTTGA

Peptide Sequence

PEP ID

Solyc02g092820.3.1
PEP Infomation

IAA-amido synthetase 3-4
Sequence

MAGASWFNINGAIDRETFKSKVPVVTYEDLKPDIDRIANGDRSPIFSSHPISEFLTSSGT
SAGERKLMPTIADELERRQKLYNLLQPVMNLYVPGLDKGKGLYFLFIKAETKTPSGLVAR
PVLTSYYKSEQFKTRPYDPYNVYTSPNETILCVDSFQSMYSQMLCGLLMREEVLRVGAVF
ASGLLRAIRFLQLNWKQLSQDIASGTLNPRVSDPSIRNCISQILKPNPQLAEFVAKECEG
ENWEGIITRIWPNTKHLDVIVTGAMAQYIPTLDYYSGGLPKVCTMYASSECYFGLNLNPL
CKPCEVCYTIMPNMGYFEFIPHDPVNPVQISRDSPPHLVDLADVEIGKEYELVITTYAGL
CRYRVGDILQVTGFHNSAPQFKFVRRKNVLLSIDSDKTDESELHTAIENATALLRPYDTT
LVEYTSFADTKTIPGHYVIYWELLVKDPANPPSDDVLNQCCLAMEQSLNSVYRQCRVADN
SIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVNFTPIVELLDSRVISVNFSPKA
PHWTPERRR*

Transcript Sequence

Transcript ID

Solyc02g092820.3.1
Transcript Infomation

IAA-amido synthetase 3-4
Sequence

ATGGCAGGGGCATCCTGGTTCAACATTAATGGTGCTATTGACCGTGAAACTTTCAAGTCT
AAGGTCCCCGTTGTTACATACGAGGATCTTAAACCTGATATTGATCGTATTGCTAATGGT
GATCGTTCTCCCATTTTCTCATCACACCCTATCTCCGAATTCCTTACCAGTTCGGGGACG
TCTGCTGGAGAGAGAAAACTGATGCCCACAATTGCGGATGAGCTAGAACGCAGACAAAAA
CTGTACAACCTTCTACAGCCCGTGATGAATCTGTATGTGCCTGGTTTAGATAAGGGGAAG
GGATTGTACTTTCTATTTATCAAGGCAGAAACGAAGACGCCTAGTGGCCTTGTTGCACGT
CCAGTCCTAACAAGTTACTACAAAAGTGAACAATTCAAGACAAGGCCATACGATCCATAC
AATGTGTATACAAGCCCCAACGAGACCATTCTCTGTGTCGATTCATTCCAAAGCATGTAT
TCCCAAATGCTTTGTGGCCTTCTCATGAGAGAAGAAGTCCTCCGAGTTGGTGCTGTTTTT
GCCTCTGGCTTACTCCGTGCCATCCGTTTTCTTCAACTCAATTGGAAGCAATTGTCTCAG
GATATCGCGTCTGGAACTCTAAACCCTAGAGTTTCAGACCCGTCTATCCGAAATTGCATT
TCCCAAATACTCAAACCAAATCCCCAACTTGCTGAGTTTGTTGCTAAGGAATGTGAAGGC
GAAAATTGGGAAGGAATCATTACTAGAATTTGGCCAAACACAAAGCACCTTGATGTGATA
GTCACAGGTGCAATGGCTCAATATATACCTACTTTGGATTATTATAGTGGGGGTCTACCA
AAGGTGTGTACAATGTACGCATCATCCGAATGTTATTTTGGACTCAATTTAAATCCATTG
TGTAAGCCTTGTGAAGTTTGTTACACCATTATGCCAAATATGGGTTACTTTGAATTCATC
CCTCATGACCCGGTCAACCCGGTTCAAATCTCTCGTGACTCACCCCCACATCTAGTAGAC
CTTGCTGACGTGGAAATTGGAAAAGAATACGAGCTCGTGATCACAACTTACGCCGGACTA
TGCCGTTACCGAGTTGGTGACATACTCCAGGTCACCGGGTTCCACAACTCGGCCCCTCAG
TTCAAATTCGTCAGGCGAAAAAACGTGCTGTTGAGTATTGATTCTGATAAAACCGATGAG
TCCGAATTACACACCGCGATTGAAAATGCGACCGCACTTTTGCGCCCGTATGATACTACT
TTAGTTGAGTACACCAGTTTTGCCGATACTAAGACAATTCCGGGGCATTACGTTATTTAC
TGGGAGTTACTTGTTAAGGACCCGGCTAACCCACCCAGTGATGACGTGTTGAACCAGTGC
TGCCTTGCGATGGAACAATCATTGAACTCGGTGTACAGGCAGTGTCGCGTCGCAGACAAT
TCAATCGGGCCACTGGAGATAAGAGTGGTGAAAAACGGGACATTTGAAGAACTTATGGAT
TATGCAATTTCGAGAGGTGCATCAATTAATCAGTATAAGGCACCAAGGTGTGTTAATTTT
ACTCCTATTGTTGAACTTTTGGACTCCAGGGTGATTTCTGTGAATTTCAGTCCAAAAGCT
CCTCACTGGACTCCAGAACGACGACGTTGAACACTAGGCATGCTATTTTATCAAGTCAAG
TAGTGTTGTTAGTGTGTGAAAAAAAAAATGTTTAGACAGTGGACCAAAGAAAGAAAAAAA
AAGAATCAGTACTATAATTCTTCGTCTCTGTCTGATCACTTTAATTTGCTTTCTTTTTGT
GAATCTGATATCTGTTGTTGGATGTTGAATATTGTTCAAAGTTGATTATGGTCTTTGCTG
ATGTAAAGAGTCGTTAATTAGTACTATTTGTAATTAATTATGTTATATATATATGGATGT
TTTGCTTGTTTTGAT