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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g092240.3.1
CDS Infomation

DUF4228 domain protein (AHRD V3.3 *** G7JF67_MEDTR)
Sequence

ATGGGGAATTGCCAAGCGGCAGAGGCAGCAACTGTAGTGATTCAACATCCAGGCAATAAA
ATTGAGAGGATTTACTGGTCTATAAGTGCACATGAAGTCATGAGTTCGAATCCTGGCCAC
TACGTCGCCCTTGTTATCACTTCTCCAACGGGGAGAACACACAACGGTTCGCCCGTCAGG
CAGCTTAAGCTTCTCCGCCCCGGAGATACTTTGCTTCTTGGACAAGTTTATCGACTCATC
TGCTTCGAAGATGTACTAAAAGAGTTTGCTGCAAAGAAGTGCGTGAAACTTGGCAAGTTG
CTCAGGGAAAGTGGAGGCCTTGTTCTCGATTCAAAGAAAATCTCCGTCGATTCTTCAGCA
GTGAAAAACAAGCCCAAAATGGTGAATGGAATCCCAGCTAAGATGGAACATGAAACTTAT
CAAAATGGAAGCAGTAGCAGCAGTGGGCAAAGAAGTGTGGGAAGGCATCATGGTGGTGTG
GGGCAATGGAAACCAGCCTTACAGAGTATTGCAGAGATTGGAACTTGA

Peptide Sequence

PEP ID

Solyc02g092240.3.1
PEP Infomation

DUF4228 domain protein (AHRD V3.3 *** G7JF67_MEDTR)
Sequence

MGNCQAAEAATVVIQHPGNKIERIYWSISAHEVMSSNPGHYVALVITSPTGRTHNGSPVR
QLKLLRPGDTLLLGQVYRLICFEDVLKEFAAKKCVKLGKLLRESGGLVLDSKKISVDSSA
VKNKPKMVNGIPAKMEHETYQNGSSSSSGQRSVGRHHGGVGQWKPALQSIAEIGT*

Transcript Sequence

Transcript ID

Solyc02g092240.3.1
Transcript Infomation

DUF4228 domain protein (AHRD V3.3 *** G7JF67_MEDTR)
Sequence

AAGCTAATCCCTCTTTCATGCTTTCTTCACACGCTCCCTTTAGTTTCATTTACCACCAAA
TTTACTTCATTTTCTGCCACGCTTCCTTACATCATTATTTTCCCCCTGTTACTACTTCTT
CTTCTTCCTTCTCTTTAGCTCATATAAACTCCAAAAAATTTACACAACTGAAAACCGTGC
GTAGTTTTTCTTCCTTTATTGGTGATTGAATTTTTTGTGTGGATTCTTCTGCATCGTTTG
CGCTCTGCATTATTAATCGATCGACCGGCCGGTGTTTGAGTTTAAGATGGGGAATTGCCA
AGCGGCAGAGGCAGCAACTGTAGTGATTCAACATCCAGGCAATAAAATTGAGAGGATTTA
CTGGTCTATAAGTGCACATGAAGTCATGAGTTCGAATCCTGGCCACTACGTCGCCCTTGT
TATCACTTCTCCAACGGGGAGAACACACAACGGTTCGCCCGTCAGGCAGCTTAAGCTTCT
CCGCCCCGGAGATACTTTGCTTCTTGGACAAGTTTATCGACTCATCTGCTTCGAAGATGT
ACTAAAAGAGTTTGCTGCAAAGAAGTGCGTGAAACTTGGCAAGTTGCTCAGGGAAAGTGG
AGGCCTTGTTCTCGATTCAAAGAAAATCTCCGTCGATTCTTCAGCAGTGAAAAACAAGCC
CAAAATGGTGAATGGAATCCCAGCTAAGATGGAACATGAAACTTATCAAAATGGAAGCAG
TAGCAGCAGTGGGCAAAGAAGTGTGGGAAGGCATCATGGTGGTGTGGGGCAATGGAAACC
AGCCTTACAGAGTATTGCAGAGATTGGAACTTGAACTATACCCACCATTAAGCATTACAC
TTTCCCTACCATGGCTAAACCTTTTCCAAAATAAGAAAGGATAGCAACTCAATTGTCCCT
AGCTAATAGTAATTAGTTTAGAAAAGTACCACTTAATTACTACAATGTTTGACGAATTCC
CTCTGAAGAATGCATCTACTTAGTAGCTGCTTATTTTCAAGTTCCACGTAATTAAAATAT
TACCTGTTATATACTTACTGCTCTTTACCTTACTTATAATTATCATTTCGCAAAATCCTT
GCAAATTAAGTTGTTAACTTGAAGAGTAAATTCCTGATGGTCATTCAACTTATAGTAATC
AAAATCAAATGAAAATTAACTAAATTAGCGGCAAATAATAGCGACTATAAACTTTATATT
ACATAATTTTAGGGG