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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g091680.3.1
CDS Infomation

Beta-D-xylosidase (AHRD V3.3 *** A9YWR3_MEDTR)
Sequence

ATGACCAAAAATATCCATTTCTTGATTCTATTCATCTTACTAAACATTCTTGAATTCAAT
GTAAATTTAACCAAATCAAATCCACAACCACAATACCCATGTCAACCCCCTCATCACAAA
TACAAATTCTGCAACAAAAAATTGTCAATTTCCAATAGAGTTCACTCTCTAATCTCTTTA
CTCACCATTGATGAGAAAATTTTACATCTCTCTGATAATACAACTTCAATTCCAAGACTT
GGTTTACCAGCATATGAATGGTGGTCAGAATCTCTTCATGGTATTGGGATTAATGGACCT
GGGATCAATTTCAATGGTTCTATTAAAAGTGCCACAAGTTTTCCCCAAGTTATTCTTACT
GCAGCTGCTTTCAATAGAACTCTGTGGCATTCGATTGCATCGGCTATTGCAGTGGAGGCA
AGGGCTATGTACAATACGGGTCAATCTGGGCTTACGTTTTGGGCGCCTAATATTAATGTT
TTTAGGGACCCTAGATGGGGAAGGGGTCAAGAAACGCCAGGGGAAGATCCAATGGTGGTT
TCTTCTTATGCTATTGAGTATGTTACGGGATTTCAACAACTGAATTCGAAGGCGGACAAA
GAAAGTAGTAATGGCCATGTGTTTGGGAATACGAGGAGGGTTCTTAAAGAAGATGACGAT
GCTGGTGATAAGCTTATGTTATCTGCTTGTTGTAAGCATTTCACTGCGTATGACTTGGAG
AAATGGGGTGATGCTACCAGATACAGCTTCAATGCTGTGGTGACCAGGCAGGATATGGAG
GACACGTTTCAGGCACCTTTTCGTAGTTGTATCCAACAAGCTAAGGCCAGTTGCTTAATG
TGTAGCTACAATAGTGTGAATGGAGTACCAGCATGTGCAGATAAGGTGCTCTTAGATAAA
GTCCGAACTGACTGGGGGTTCGATGGATACATCACCTCTGATTGTGATGCTGTGGCTACT
ATATATGAAAACCAAAATTACACTCAAACTCCAGAAGATGCTGTTGCTCTTGCTCTTAAA
GCAGGTTTTCTAGCAGTCTCATCAAATTTGTTATTCTATGTTACTCTATCCTCTTTATCC
AATTCTTATTCAACAATTTTGGCAGGAACAAATATAAACTGTGGAACATACATGCTGCGA
TACGTGAAATCTGCATTCCAGCAGGGGAGTGTGCTTGAAGAAGACCTAGACAGAGCACTG
CAATACTTGTTTTCTGTTCAATTCCGGCTTGGTCTTTTTGATGGAAACCCTGCAAAGGGA
CAGTTTGCAAAATTTGGTCCTCAAGATGTCTGTACTTCTAATAACTTGGAGTTGGCGCTT
GATGCTGTGAGGCAGGGCATTGTGCTTCTTAAAAATGATCAGAAGTTCTTGCCATTGGAC
AAGAGAAGAATTTCTACATTAGCTATTGTCGGTCCTATGGCAAATGTGAGCAGTCCTGGT
GGTACTTACACAGGCGTGCCGTGCAAATTAAAGAGCATACGTGATGGGTTTCACCGTCAT
ATAAATAGAACACTTTATGCAGCTGGTTGCCTGGACGTAGGATGCAATTCCACTGCTGGT
TTCCCGGATGCTATTTCTATTGCTAAAGAAGCTGATTATGTAATTGTTGTGGCTGGGTTG
GATTTATCCCAGGAAACTGAGGATCTTGACCGGTATAGTCTTCTCTTACCAGGTCATCAG
ACAAACTTAGTTAGCGCTCTTGCAGCTGTAAGTAAGAAACCAATCATTTTGGTTCTTACT
GGTGGTGGACCTATTGATGTATCCTTTGCTGAGAAAGACCCAAGAATTGCTAGTATCTTA
TGGGTTGCTTACCCTGGAGAGACTGGTGGCAAAGCACTATCCGAGATAATTTTCGGATAT
CAAAATCCAGGTGGAAAATTGCCTATGACTTGGTACCTCGAGTCATACTCCAAAGTGCCA
ATGACTAACATGAGTATGAGAGCTGATCCTGCGAGTGGTTATCCAGGAAGAACCTATCGG
TTTTACACGGGAGATCTGCTATATGGATTTGGACATGGATTAAGCTATACAAGCTTCTCT
TCGCGACTCTTATCTGCACCAAATAGATTGAGTTTATCACTTGGTAAATCTAATTGGAAA
AGGAGTATACTTGCCCAAGAACACAGTAGGCTTGGTTACATTCATGTCGACGAAGTTCCA
AGTTGTAGTTTGTCTAAATTCTTCATTCATATCTCTGTCACAAATGATGGGGACATGGAT
GGAAGCCATGTTCTGCTGTTATTCTCACGTGTCCCACAGAATATTCAAGGTTCTCCACAG
AAACAACTAGTGGGATTTGATCGCGTGCATGTCCCTGCACGTAAATCTGTTGAAACAAGT
CTCTCGATAAATCCTTGCGAGTTTCTCAGCTTTTCAAATGACCAAGGCAACAGAATACTG
GCACTTGGTGAACACACTCTCGTTTTAGATGATATTGAACATGTTGTATCCATTGAAATG
TGA

Peptide Sequence

PEP ID

Solyc02g091680.3.1
PEP Infomation

Beta-D-xylosidase (AHRD V3.3 *** A9YWR3_MEDTR)
Sequence

MTKNIHFLILFILLNILEFNVNLTKSNPQPQYPCQPPHHKYKFCNKKLSISNRVHSLISL
LTIDEKILHLSDNTTSIPRLGLPAYEWWSESLHGIGINGPGINFNGSIKSATSFPQVILT
AAAFNRTLWHSIASAIAVEARAMYNTGQSGLTFWAPNINVFRDPRWGRGQETPGEDPMVV
SSYAIEYVTGFQQLNSKADKESSNGHVFGNTRRVLKEDDDAGDKLMLSACCKHFTAYDLE
KWGDATRYSFNAVVTRQDMEDTFQAPFRSCIQQAKASCLMCSYNSVNGVPACADKVLLDK
VRTDWGFDGYITSDCDAVATIYENQNYTQTPEDAVALALKAGFLAVSSNLLFYVTLSSLS
NSYSTILAGTNINCGTYMLRYVKSAFQQGSVLEEDLDRALQYLFSVQFRLGLFDGNPAKG
QFAKFGPQDVCTSNNLELALDAVRQGIVLLKNDQKFLPLDKRRISTLAIVGPMANVSSPG
GTYTGVPCKLKSIRDGFHRHINRTLYAAGCLDVGCNSTAGFPDAISIAKEADYVIVVAGL
DLSQETEDLDRYSLLLPGHQTNLVSALAAVSKKPIILVLTGGGPIDVSFAEKDPRIASIL
WVAYPGETGGKALSEIIFGYQNPGGKLPMTWYLESYSKVPMTNMSMRADPASGYPGRTYR
FYTGDLLYGFGHGLSYTSFSSRLLSAPNRLSLSLGKSNWKRSILAQEHSRLGYIHVDEVP
SCSLSKFFIHISVTNDGDMDGSHVLLLFSRVPQNIQGSPQKQLVGFDRVHVPARKSVETS
LSINPCEFLSFSNDQGNRILALGEHTLVLDDIEHVVSIEM*

Transcript Sequence

Transcript ID

Solyc02g091680.3.1
Transcript Infomation

Beta-D-xylosidase (AHRD V3.3 *** A9YWR3_MEDTR)
Sequence

TGAAAATCAGTCAACAAATCAATCATACAGTCTTGTTCCAACAATGACCAAAAATATCCA
TTTCTTGATTCTATTCATCTTACTAAACATTCTTGAATTCAATGTAAATTTAACCAAATC
AAATCCACAACCACAATACCCATGTCAACCCCCTCATCACAAATACAAATTCTGCAACAA
AAAATTGTCAATTTCCAATAGAGTTCACTCTCTAATCTCTTTACTCACCATTGATGAGAA
AATTTTACATCTCTCTGATAATACAACTTCAATTCCAAGACTTGGTTTACCAGCATATGA
ATGGTGGTCAGAATCTCTTCATGGTATTGGGATTAATGGACCTGGGATCAATTTCAATGG
TTCTATTAAAAGTGCCACAAGTTTTCCCCAAGTTATTCTTACTGCAGCTGCTTTCAATAG
AACTCTGTGGCATTCGATTGCATCGGCTATTGCAGTGGAGGCAAGGGCTATGTACAATAC
GGGTCAATCTGGGCTTACGTTTTGGGCGCCTAATATTAATGTTTTTAGGGACCCTAGATG
GGGAAGGGGTCAAGAAACGCCAGGGGAAGATCCAATGGTGGTTTCTTCTTATGCTATTGA
GTATGTTACGGGATTTCAACAACTGAATTCGAAGGCGGACAAAGAAAGTAGTAATGGCCA
TGTGTTTGGGAATACGAGGAGGGTTCTTAAAGAAGATGACGATGCTGGTGATAAGCTTAT
GTTATCTGCTTGTTGTAAGCATTTCACTGCGTATGACTTGGAGAAATGGGGTGATGCTAC
CAGATACAGCTTCAATGCTGTGGTGACCAGGCAGGATATGGAGGACACGTTTCAGGCACC
TTTTCGTAGTTGTATCCAACAAGCTAAGGCCAGTTGCTTAATGTGTAGCTACAATAGTGT
GAATGGAGTACCAGCATGTGCAGATAAGGTGCTCTTAGATAAAGTCCGAACTGACTGGGG
GTTCGATGGATACATCACCTCTGATTGTGATGCTGTGGCTACTATATATGAAAACCAAAA
TTACACTCAAACTCCAGAAGATGCTGTTGCTCTTGCTCTTAAAGCAGGTTTTCTAGCAGT
CTCATCAAATTTGTTATTCTATGTTACTCTATCCTCTTTATCCAATTCTTATTCAACAAT
TTTGGCAGGAACAAATATAAACTGTGGAACATACATGCTGCGATACGTGAAATCTGCATT
CCAGCAGGGGAGTGTGCTTGAAGAAGACCTAGACAGAGCACTGCAATACTTGTTTTCTGT
TCAATTCCGGCTTGGTCTTTTTGATGGAAACCCTGCAAAGGGACAGTTTGCAAAATTTGG
TCCTCAAGATGTCTGTACTTCTAATAACTTGGAGTTGGCGCTTGATGCTGTGAGGCAGGG
CATTGTGCTTCTTAAAAATGATCAGAAGTTCTTGCCATTGGACAAGAGAAGAATTTCTAC
ATTAGCTATTGTCGGTCCTATGGCAAATGTGAGCAGTCCTGGTGGTACTTACACAGGCGT
GCCGTGCAAATTAAAGAGCATACGTGATGGGTTTCACCGTCATATAAATAGAACACTTTA
TGCAGCTGGTTGCCTGGACGTAGGATGCAATTCCACTGCTGGTTTCCCGGATGCTATTTC
TATTGCTAAAGAAGCTGATTATGTAATTGTTGTGGCTGGGTTGGATTTATCCCAGGAAAC
TGAGGATCTTGACCGGTATAGTCTTCTCTTACCAGGTCATCAGACAAACTTAGTTAGCGC
TCTTGCAGCTGTAAGTAAGAAACCAATCATTTTGGTTCTTACTGGTGGTGGACCTATTGA
TGTATCCTTTGCTGAGAAAGACCCAAGAATTGCTAGTATCTTATGGGTTGCTTACCCTGG
AGAGACTGGTGGCAAAGCACTATCCGAGATAATTTTCGGATATCAAAATCCAGGTGGAAA
ATTGCCTATGACTTGGTACCTCGAGTCATACTCCAAAGTGCCAATGACTAACATGAGTAT
GAGAGCTGATCCTGCGAGTGGTTATCCAGGAAGAACCTATCGGTTTTACACGGGAGATCT
GCTATATGGATTTGGACATGGATTAAGCTATACAAGCTTCTCTTCGCGACTCTTATCTGC
ACCAAATAGATTGAGTTTATCACTTGGTAAATCTAATTGGAAAAGGAGTATACTTGCCCA
AGAACACAGTAGGCTTGGTTACATTCATGTCGACGAAGTTCCAAGTTGTAGTTTGTCTAA
ATTCTTCATTCATATCTCTGTCACAAATGATGGGGACATGGATGGAAGCCATGTTCTGCT
GTTATTCTCACGTGTCCCACAGAATATTCAAGGTTCTCCACAGAAACAACTAGTGGGATT
TGATCGCGTGCATGTCCCTGCACGTAAATCTGTTGAAACAAGTCTCTCGATAAATCCTTG
CGAGTTTCTCAGCTTTTCAAATGACCAAGGCAACAGAATACTGGCACTTGGTGAACACAC
TCTCGTTTTAGATGATATTGAACATGTTGTATCCATTGAAATGTGACAAGCAAGAGCCAT
CGTGGTTATGAGGAAATCAATTGCCTCTGCATCGGAGGGTTTTCTTGCCTGAAATGTTCA
TAGAATAAGAATATTGTTGTGACCCGATTCTCAGATTTTTCTCCATTTAGCACCAGAGCA
TGAAGTTGAGGAATTATAGGATTTTTGTATGCTCATTTGTATAATCACAGATTCAATAAG
ATATTGTGAAAGATTTGTAATTGCCTCTTTTATTCTCTGTTACTATTAAAGCGTGAAATT
TGTTCCTATAGAGATCTGTTTCCAGAATTGTTTGATCATTTGACATGGATTCTACAAAAA
GTTGACT