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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g091280.3.1
CDS Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BCS6_SOLLC)
Sequence

ATGGAGGGAAGTTGTCTAACATTTAGCACAGCTTTGGCACCAGCCAGACCTTCAACATGC
CTTCATTACAATTCTACTTTTGTTAAACAGTTTCAGACAAATACAATCACACCAAGAAGA
GGATTATCAGTAAAAGCGTCCACCCACAAGCCGACTTTATCGACGAACTGGGATGTTTCC
AGTTACTCAAAAGCCCCTGCTTGGATGCCCAGATTTGAAGAACTTGATACCACCAATATG
CTTCTTCGTCAAAGGATTATCTTCTTGGGTTCTCAGGTAGATGATATTACTGCGGATTTT
ATTATAAGCCAGCTATTAATTCTTGATGCAGAAGATGATAAAAAGGACATCAGATTGATC
ATTAATTCACCTGGTGGTTCAGTAACTGCTGGAATGGGAATATATGATGCCATGAAAATG
TGTAAGGCTGATGTTTCTACTATCTGCATGGGATTGGCTGCATCCATGGGTGCGTTTCTC
CTGGCTTCTGGCAGCAAGGGAAAGAGGTACTGCATGCCAAACGCAAAAGTGATGATCCAT
CAACCACTTGGAACTTCTGGTGGTAAAGCAACAGAGATGGGTATACGGATCAGAGAAATG
GGATACCACAAGATGAAGCTTAATAAAATACTATCAAGAGTTACAGGCCAGCCTTTAGAA
AAGATTGAAGTGGATACTGATCGTGATAATTTTATGAATGCTTGGGAGTCTAAGGAATAC
GGGTTGGTTGATGCTGTTATAGATGACGGCAAACCAGGATTGGTAGCACCCATTACCGAG
GATGCACCTCCACCAAAAACACGAGTTTGGTATAAGTGGAAGGCCGAAGGCACCAGGAAG
AGAAAGAACAATTGGCCTTCTGAAGAAAAGTTATTCCAAAATGATGAGCAGAGCAATGAA
CAGAAAGATGAAGCTCTAAGTCCTCTATAA

Peptide Sequence

PEP ID

Solyc02g091280.3.1
PEP Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BCS6_SOLLC)
Sequence

MEGSCLTFSTALAPARPSTCLHYNSTFVKQFQTNTITPRRGLSVKASTHKPTLSTNWDVS
SYSKAPAWMPRFEELDTTNMLLRQRIIFLGSQVDDITADFIISQLLILDAEDDKKDIRLI
INSPGGSVTAGMGIYDAMKMCKADVSTICMGLAASMGAFLLASGSKGKRYCMPNAKVMIH
QPLGTSGGKATEMGIRIREMGYHKMKLNKILSRVTGQPLEKIEVDTDRDNFMNAWESKEY
GLVDAVIDDGKPGLVAPITEDAPPPKTRVWYKWKAEGTRKRKNNWPSEEKLFQNDEQSNE
QKDEALSPL*

Transcript Sequence

Transcript ID

Solyc02g091280.3.1
Transcript Infomation

ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4BCS6_SOLLC)
Sequence

CCGAAATATATGAGAGAGTAATATCTCTCTGTTAAAAGAAGTGGAAAAAAAAAATCAATC
TTTGGAGTCTCTTAGCCAAAAACCCCTAATAGCAGAAAAAGAGTGGAAGACGAATGGAGG
GAAGTTGTCTAACATTTAGCACAGCTTTGGCACCAGCCAGACCTTCAACATGCCTTCATT
ACAATTCTACTTTTGTTAAACAGTTTCAGACAAATACAATCACACCAAGAAGAGGATTAT
CAGTAAAAGCGTCCACCCACAAGCCGACTTTATCGACGAACTGGGATGTTTCCAGTTACT
CAAAAGCCCCTGCTTGGATGCCCAGATTTGAAGAACTTGATACCACCAATATGCTTCTTC
GTCAAAGGATTATCTTCTTGGGTTCTCAGGTAGATGATATTACTGCGGATTTTATTATAA
GCCAGCTATTAATTCTTGATGCAGAAGATGATAAAAAGGACATCAGATTGATCATTAATT
CACCTGGTGGTTCAGTAACTGCTGGAATGGGAATATATGATGCCATGAAAATGTGTAAGG
CTGATGTTTCTACTATCTGCATGGGATTGGCTGCATCCATGGGTGCGTTTCTCCTGGCTT
CTGGCAGCAAGGGAAAGAGGTACTGCATGCCAAACGCAAAAGTGATGATCCATCAACCAC
TTGGAACTTCTGGTGGTAAAGCAACAGAGATGGGTATACGGATCAGAGAAATGGGATACC
ACAAGATGAAGCTTAATAAAATACTATCAAGAGTTACAGGCCAGCCTTTAGAAAAGATTG
AAGTGGATACTGATCGTGATAATTTTATGAATGCTTGGGAGTCTAAGGAATACGGGTTGG
TTGATGCTGTTATAGATGACGGCAAACCAGGATTGGTAGCACCCATTACCGAGGATGCAC
CTCCACCAAAAACACGAGTTTGGTATAAGTGGAAGGCCGAAGGCACCAGGAAGAGAAAGA
ACAATTGGCCTTCTGAAGAAAAGTTATTCCAAAATGATGAGCAGAGCAATGAACAGAAAG
ATGAAGCTCTAAGTCCTCTATAATGTATTGGGATACATGTGGCCTTGAACAGATAGTCCC
TACTGAATATGAGATGTCGTCTTGAGGGTTCATTGTAAGATTATTAACAGGAATTTTTAT
ATTATGGTCGACGTCAGTTGAGCCTTCTGTTGTATCAATGTCTCCTCTTAGTATTTGAAC
TGGTCCTTTATCAACAAAGAGAACATTTGAAATGGTATTTTTGTTGGGGATTTATATAGC
ATATCACATCCT