Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g090850.3.1
CDS Infomation

CLK4-associating serine/arginine-rich protein (AHRD V3.3 *** AT4G36980.4)
Sequence

ATGTGGCATGAAGCTCGGAGGTCGGAGAAGAAAGTTCACGATATGATGGACGCTGCTCGT
AAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGTGATCCACAGCAATCC
ATTCAAGCCATCGGCTCTCGTTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACC
GAGGATCAGCAGGGAATGATACCTTGGAATGGGAAACAAGACATTTTGATTGACAGATTT
GATGGCCGTGCTCTTCTTGATTTCATTCGTGATCCTAGTTCTCGACATCGTCGGGCCCCA
GAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGAT
TTAATTAAGCATCGGCGTAGAGGATTTAAAGATGAAGAGGGTATGCAACATGTTAATCAG
GAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAGACCTCAGCTTTCTCAGCCT
CCAGTGAGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGAT
GAAGCTCACTTTTCGGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAA
GAAGATTTTAACAGCGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAGGATTAT
GGTGTGAAACGGTATGGATGGCTTGTCTACACGGACAAAAAGGCCAAGGAGGAAGAAAGG
AGGCAAAGAGAAGTTATTAAGGGAGATCCTGCAATAAGGAAGCTAAGTCGCAAAGAGAGA
AGAAAAGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGTAGT
AGAGTTCTTCATCATGATCCCTATCGTGAATCTCGTCGAAGTCCGACATATGAAGCTTAT
TCACGTTCCAGAAGATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGC
TACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATA
GAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATAT
TCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGCCATCAACTGGTCGT
ATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGT
GGCCAAATGTTGAAAACACCAACAAGTGCGTCTTCAGCACTATCTAAGTTGAACAAGACA
ACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGA
CTTAAGCGGATTATGAGCAAACAATTGAACAAACAAATCAAGAAAGATACAGCTATTGAA
ACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCGG
GTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAGGCAT
CGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGG
TCTGGCTCACGGTCGCGCACTCACTCTTGCTCACATTCGCCTTCGCATTCTCACTCCAGT
TCACGCTCTCTTTCTCGTTCCATTTCCCGGTCTCGTTCACCTCGTAGGAGACGATCAAGA
TACTGA

Peptide Sequence

PEP ID

Solyc02g090850.3.1
PEP Infomation

CLK4-associating serine/arginine-rich protein (AHRD V3.3 *** AT4G36980.4)
Sequence

MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPQQSIQAIGSRCRIYRDDALYQAT
EDQQGMIPWNGKQDILIDRFDGRALLDFIRDPSSRHRRAPERTEEEEELEEFVNFQRYRD
LIKHRRRGFKDEEGMQHVNQEMEAKTTALLGSDRPQLSQPPVSKGSYSQVGFSYDGEGKD
EAHFSDGEEEDEDDDDDEEEEDFNSDDSNDEVMESIAKDYGVKRYGWLVYTDKKAKEEER
RQREVIKGDPAIRKLSRKERRKASQLEREREREAARITGSRVLHHDPYRESRRSPTYEAY
SRSRRSRSRSLSYSPPHSRRYERGGKSDDIYQGKERTPKIEYITEFGGADDENKPKVEGY
SPPPSPPPRTDPLSRPSTGRILEALHVDPASGVSIDKDKSGQMLKTPTSASSALSKLNKT
TSSSSLSKQQGEKKETPQERLKRIMSKQLNKQIKKDTAIETAKKREQEKQRLEKLAETSR
VSRYRRRSRSRSYSRSPRRHRRSRSPSRERSSRRYRSRSRSGSRSRTHSCSHSPSHSHSS
SRSLSRSISRSRSPRRRRSRY*

Transcript Sequence

Transcript ID

Solyc02g090850.3.1
Transcript Infomation

CLK4-associating serine/arginine-rich protein (AHRD V3.3 *** AT4G36980.4)
Sequence

TAATAGAAGGACAAATAAGCTATTGTATCGCTATTAACTTTTGGGTGGCCTTTTGCGTAA
TTTCACCGCGACAAACAAAAATAAGAACGCGATAATCACCCAAATACACAAGTATCCTAA
AATTGAGAGTGAGGGAGGGTGTTAGGGTTTCCAATTCCGATTCTTCACCTGCAAATTAGG
ACCGAAGAAGAAAGAGAAAGATGTGGCATGAAGCTCGGAGGTCGGAGAAGAAAGTTCACG
ATATGATGGACGCTGCTCGTAAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCC
GTGGTGATCCACAGCAATCCATTCAAGCCATCGGCTCTCGTTGTCGTATCTACCGCGACG
ACGCTCTTTATCAAGCCACCGAGGATCAGCAGGGAATGATACCTTGGAATGGGAAACAAG
ACATTTTGATTGACAGATTTGATGGCCGTGCTCTTCTTGATTTCATTCGTGATCCTAGTT
CTCGACATCGTCGGGCCCCAGAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTA
ATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGATTTAAAGATGAAGAGG
GTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACA
GACCTCAGCTTTCTCAGCCTCCAGTGAGCAAGGGGTCGTATTCACAAGTGGGTTTCTCAT
ATGATGGAGAGGGGAAAGATGAAGCTCACTTTTCGGATGGTGAAGAAGAAGATGAAGATG
ACGATGATGATGAGGAAGAAGAAGATTTTAACAGCGATGATAGCAACGATGAAGTGATGG
AGTCAATTGCCAAGGATTATGGTGTGAAACGGTATGGATGGCTTGTCTACACGGACAAAA
AGGCCAAGGAGGAAGAAAGGAGGCAAAGAGAAGTTATTAAGGGAGATCCTGCAATAAGGA
AGCTAAGTCGCAAAGAGAGAAGAAAAGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAG
CTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCGTGAATCTCGTCGAA
GTCCGACATATGAAGCTTATTCACGTTCCAGAAGATCCAGGTCAAGGTCTCTCTCATACT
CCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCA
AAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACA
AGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAA
GCCGGCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTAT
CTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAGTGCGTCTTCAGCAC
TATCTAAGTTGAACAAGACAACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGA
AGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAGCAAACAATTGAACAAACAAATCA
AGAAAGATACAGCTATTGAAACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAA
AGCTGGCAGAGACAAGCCGGGTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACA
GCCGTTCCCCTCGAAGGCATCGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTA
GATATCGCTCACGTTCAAGGTCTGGCTCACGGTCGCGCACTCACTCTTGCTCACATTCGC
CTTCGCATTCTCACTCCAGTTCACGCTCTCTTTCTCGTTCCATTTCCCGGTCTCGTTCAC
CTCGTAGGAGACGATCAAGATACTGATACTACAGGCATGAACGAGTGTTAGCTGTGGGCG
ATATATATTACTGATGTATTGTTGTACTGGTAAACTTATAGCTGAAGCTGAATTTGGGTT
GATGATGTGAAGTTTTATTCATGAGTTGTGTTTATTGTTTTTGGTTGCTTTTTGAACTTG
CTGAAGAATATTTAGCGTGACAATTATATTATTTCAGCTCCTTTAGTAGGATGATGCATC
ATTCCAGTACTTGTGCCCTATGTCCATAACCCCCTTAGATACTCCATCCGCAAGTGTTCA
CTTGGAAGCAAACCAGTGTACATTATGAGTATCTTTCATACATCTTATAGCTGGTAGCAG
GTGTTATATATGAACCATTAACTTAAATTATTGCGTCAAAGCAAGCAGACTCT