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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g090490.3.1
CDS Infomation

Patatin (AHRD V3.3 *** K4BCJ8_SOLLC)
Sequence

ATGGGGAGGATGGTTCTTATAGCTGCAGCAATGACTCTTTTTGTAACCCTTCAAGTTTTA
CAACCTCCATTAGTAGTTTCTGCCGCCACCAAAGGAAAGACGGTAACCGTTTTGAGTATC
GATGGAGGTGGTATTAGAGGCATTATTCCTGGAACCCTACTTGCCTTCCTTGAATCTAAA
CTTCAGGAACTTGATGGACCAAATGCAAGAATTGCAGATTACTTCGATGTAGTAGCAGGA
ACAAGCACAGGTGGATTAGTAACAACTATGCTTACTGCTCCTAACAAGGATAATCGTCCT
TTATATCAAGCAAAAGATATTTCCAATTTCTACATGCAACATGGCCCTCAAATTTTTCCT
CAAAGCAGGCGTAACAGCTTTGTGAGAAGGATCACAAATTTGTTTGGAGGACCAAAGTAT
GATGGCATATACTTGAGAACAATTATTAATTCAATATTAGGCAATCTTACAATGAAGCAA
ACGTTGACTAATACAGTCATACCTACTTTTGATATCAAACGTCTTCAACCAATAATCTTC
AGTACTGCTGATGCAAAAGCAAATATCTCAAAGAATGCTCAATTATCAGACGTTTGCCTT
AGTACCTCAGCCGCACCCACTTATTTCCCAGTGCACAGTTTTGAGACTAAGGATGCTCAA
GGCAAAACGCGTACATTTGATCTTGTCGATGGAGGTGTAGCTGCAAATAATCCAACCTTA
ATGGCAATAACATACGTTTCAAAACAAATCATGACGGGCAACTTTCAATACGAGGGTATG
AAGAATATGGACTGCAACAAAATGTTGGTTCTGTCGTTGGGCACGGGTATAGGCAAGCAA
GAAGAGAAGTATAATGCTACAGTGGCTTCCAGATGGGGGATGGTAGGTTGGGTGTACAAC
AATGGTGCCACCCCTTTGATAGATATTTATGGTGATGCTAGTGCTGATATGGTAGACATA
CATACTTCCACCATGTTTCAGACCCTTGGTAGTGAGAAGAACTACATCAGGATTCAGGAT
GACAATTTGACAGGGGAGGCTGCATCTATGGATATTGCAACGACACAAAACATGGAGACA
CTGGTACAAATTGGTAATGATCTATTGAAGAAGCCAATTTCAAGGGTCAACTTAGAAACA
GGCCGATACGAACCAGTTGTTGGGGAAGGCACCAACGAAGCTGCTATAGTCCGCTTCGCT
CAGTTGCTTTCAGAGGAAAGGAAGCTCCGAATAAACTAA

Peptide Sequence

PEP ID

Solyc02g090490.3.1
PEP Infomation

Patatin (AHRD V3.3 *** K4BCJ8_SOLLC)
Sequence

MGRMVLIAAAMTLFVTLQVLQPPLVVSAATKGKTVTVLSIDGGGIRGIIPGTLLAFLESK
LQELDGPNARIADYFDVVAGTSTGGLVTTMLTAPNKDNRPLYQAKDISNFYMQHGPQIFP
QSRRNSFVRRITNLFGGPKYDGIYLRTIINSILGNLTMKQTLTNTVIPTFDIKRLQPIIF
STADAKANISKNAQLSDVCLSTSAAPTYFPVHSFETKDAQGKTRTFDLVDGGVAANNPTL
MAITYVSKQIMTGNFQYEGMKNMDCNKMLVLSLGTGIGKQEEKYNATVASRWGMVGWVYN
NGATPLIDIYGDASADMVDIHTSTMFQTLGSEKNYIRIQDDNLTGEAASMDIATTQNMET
LVQIGNDLLKKPISRVNLETGRYEPVVGEGTNEAAIVRFAQLLSEERKLRIN*

Transcript Sequence

Transcript ID

Solyc02g090490.3.1
Transcript Infomation

Patatin (AHRD V3.3 *** K4BCJ8_SOLLC)
Sequence

ACTAGGTTTTAACTTTCTTTTAACATAACAATACACACTTTTCTCCCCTTCTCTTTCAAA
TATCAAAAACACAAAACTCTTTTTTGTTAGGTAATAACTCAACATGGGGAGGATGGTTCT
TATAGCTGCAGCAATGACTCTTTTTGTAACCCTTCAAGTTTTACAACCTCCATTAGTAGT
TTCTGCCGCCACCAAAGGAAAGACGGTAACCGTTTTGAGTATCGATGGAGGTGGTATTAG
AGGCATTATTCCTGGAACCCTACTTGCCTTCCTTGAATCTAAACTTCAGGAACTTGATGG
ACCAAATGCAAGAATTGCAGATTACTTCGATGTAGTAGCAGGAACAAGCACAGGTGGATT
AGTAACAACTATGCTTACTGCTCCTAACAAGGATAATCGTCCTTTATATCAAGCAAAAGA
TATTTCCAATTTCTACATGCAACATGGCCCTCAAATTTTTCCTCAAAGCAGGCGTAACAG
CTTTGTGAGAAGGATCACAAATTTGTTTGGAGGACCAAAGTATGATGGCATATACTTGAG
AACAATTATTAATTCAATATTAGGCAATCTTACAATGAAGCAAACGTTGACTAATACAGT
CATACCTACTTTTGATATCAAACGTCTTCAACCAATAATCTTCAGTACTGCTGATGCAAA
AGCAAATATCTCAAAGAATGCTCAATTATCAGACGTTTGCCTTAGTACCTCAGCCGCACC
CACTTATTTCCCAGTGCACAGTTTTGAGACTAAGGATGCTCAAGGCAAAACGCGTACATT
TGATCTTGTCGATGGAGGTGTAGCTGCAAATAATCCAACCTTAATGGCAATAACATACGT
TTCAAAACAAATCATGACGGGCAACTTTCAATACGAGGGTATGAAGAATATGGACTGCAA
CAAAATGTTGGTTCTGTCGTTGGGCACGGGTATAGGCAAGCAAGAAGAGAAGTATAATGC
TACAGTGGCTTCCAGATGGGGGATGGTAGGTTGGGTGTACAACAATGGTGCCACCCCTTT
GATAGATATTTATGGTGATGCTAGTGCTGATATGGTAGACATACATACTTCCACCATGTT
TCAGACCCTTGGTAGTGAGAAGAACTACATCAGGATTCAGGATGACAATTTGACAGGGGA
GGCTGCATCTATGGATATTGCAACGACACAAAACATGGAGACACTGGTACAAATTGGTAA
TGATCTATTGAAGAAGCCAATTTCAAGGGTCAACTTAGAAACAGGCCGATACGAACCAGT
TGTTGGGGAAGGCACCAACGAAGCTGCTATAGTCCGCTTCGCTCAGTTGCTTTCAGAGGA
AAGGAAGCTCCGAATAAACTAACGAAATACTTGCAGAAATTTTACACACAATTTGTTGGA
CGATTAGAAGATTAATTTGTATTCTTTTACCCTTCAATAGTTAAGCGCCTAACTAGTAAA
CCATGTTGTAATATGAGAATAAACATCCCAAGAAGAAAATAAAATTTATGTAATACTTCT
GTTTTTT