Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g090070.3.1
CDS Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G66560.1)
Sequence	ATGGCGCACACGGAGCACCCCACCACCAAAGGCCAAGCATGGTTTTGTACTACAGGATTA CCCAGTGATATCATCATTGAAGTTGAAGATATGACCTTCCATCTTCACAAGTTTCCCCTG ATGTCAAAAAGTAGAAAGCTTCATGAAATGATAACAGAGCAAGAGACAAATGCAAGTAGC AGTAAAATCCAAAAATCTGCTGAACGAGACAACGATTGTGATGGTGATGAGGAGATTGAA GAAGAAGAGGATAATGAGGAGGACCAGCAATACTGTATTTCGTTCCCTGATTTCCCGGGA GGTTCAGAGACATTTGAGACGGCTGCCAAGTTCTGTTATGGTGTGAAAATCGAGTTGTCT GCATTGAACGTTGCTCCACTCCGCTGTGCGGGTGAGTACTTGGAGATGACTGAAGAGTAC TCTGAGGATAACCTCATTTCCAAGACGGAGAGGTTTCTTTCACAGACAGTGCTAAAGAGT ATTAAGGACTCCATTAGAACCCTAAACTCGTGCAAAAACATCTTGCCGTTAGCAGAAACA CTCGGCATTGTTCAGAGATGCATTGATGCCGTTGCTGTTAGAGCTTCAGCTGCCGATCCG TCTCTCTTTGGCTGGCCGGTGAATGATCACGGCCCTGGAAATGGAGTTGAAGCAAGTACT CGCCGTAAAGGTGCCAACAGAGGAGGTGGTATGGATTCATGGTTCGAAGAGCTAGGGCAC TTGAGCTTGCCTTTGTTCAAGCGTTTGATTTCTGCAATGAAAAGTAGAGATTTGTGTTCA GAAGTTATCGAGAGCTGTCTAATGTATTATGCGAAGAAGTACATTCCAGGAATTTCACGC TCAAGTAGGAAGACATCGTCGTCTTCGATACCATCGGAGAATGAACAGAGAGAGCTTTTG GAGACTGTAATTACCAACCTTCCTACAGAGATTAGCTCAAGAACTTCAACAACCACAAGG ATTCTCTTCGGCTTATTGAGAACAGCAAACATACTAAATGCTTCGGAAGCTGCTCGAGCT GCACTAGAGCGGAAAATCGGATCTCAACTGGAGCACGCCACATTAGACGATCTTCTCATT CCAAGCTACTCTTATCTGAATGAAACGTTATACGATGTCGCTTGTGTGGAGAGAATATTA GGATATTTTTTAACCGGATTGGAAGAGAGGTCTACCGCTAGAATTCAAGGCGAAGAAGAA AACATCAGTGTCAGATCCACGGCGCTAATGTTAGTCGGCAAGTTAATTGACGGTTACTTA TCAGAAATAGCCTCTGATAATAATTTACTACCGGAAAAATTCTGTGAATTAGCTGTTGCA TTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTC AAGGCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGAGTTATGGATTGC CAAAAGTTAACACTAGAGGCGTGTACACACGCAGCTCAGAATGAACGGCTTCCACTTAGA GCCGTAGTTCAGGTACTATTCTTCGAACAACTCCAACTCCGGCAGGCAATCGCCGGAACT CTTATGGTCGCCGATGTGAATCCAGAAGAAATCCCGCGGCTGTCAATTATGGACGTGAGG GAAGAGGAGGGTGAAGGTGGGGAGCAAGAGGAAATGACAGGAGTAGTTGGAATGGGACGT GCACAGGAAGGTCGTAGCACGTGGAGGAAAACAGTGAGGGAGAATCAAGTGCTACGGTTG GATATGGATAGCATGAGGACGCGAGTACAAGAACTTGAGCGCGAATGCTCCTCAATGAAG AAAGTAATCCAGAAGATAGATAAGGTAGGCAGCAGAGAAGGAGGAGGTGGGTGGAGAAAG AAGTTGGGATGTAAATTCAAGACACAAGTATGTGACTCGCATGAGCCAACGGTTGTGGAG GCCAAGAAAGGACGGGGACAGCGTCATCAACAATAA

Peptide Sequence

PEP ID	Solyc02g090070.3.1
PEP Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G66560.1)
Sequence	MAHTEHPTTKGQAWFCTTGLPSDIIIEVEDMTFHLHKFPLMSKSRKLHEMITEQETNASS SKIQKSAERDNDCDGDEEIEEEEDNEEDQQYCISFPDFPGGSETFETAAKFCYGVKIELS ALNVAPLRCAGEYLEMTEEYSEDNLISKTERFLSQTVLKSIKDSIRTLNSCKNILPLAET LGIVQRCIDAVAVRASAADPSLFGWPVNDHGPGNGVEASTRRKGANRGGGMDSWFEELGH LSLPLFKRLISAMKSRDLCSEVIESCLMYYAKKYIPGISRSSRKTSSSSIPSENEQRELL ETVITNLPTEISSRTSTTTRILFGLLRTANILNASEAARAALERKIGSQLEHATLDDLLI PSYSYLNETLYDVACVERILGYFLTGLEERSTARIQGEEENISVRSTALMLVGKLIDGYL SEIASDNNLLPEKFCELAVALPDQARLFDDGLYRAVDVYLKAHPWISEAEREQICGVMDC QKLTLEACTHAAQNERLPLRAVVQVLFFEQLQLRQAIAGTLMVADVNPEEIPRLSIMDVR EEEGEGGEQEEMTGVVGMGRAQEGRSTWRKTVRENQVLRLDMDSMRTRVQELERECSSMK KVIQKIDKVGSREGGGGWRKKLGCKFKTQVCDSHEPTVVEAKKGRGQRHQQ*

Transcript Sequence

Transcript ID	Solyc02g090070.3.1
Transcript Infomation	Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G66560.1)
Sequence	AGTGTTGATGCAGAAAAGCAATAACGATAGTTGGCAAGCAAAGTGTGTTTTTGTTGCTTA TAAACAGAGAAAAAAGGGAACAATTTAATGATGACAGTAATAATTTTTCCTGCTTGTGTG TATTCTTACAAAGTGGATTTTCAAAGTGCTTTTTGAATCCTCCACCAAGCTTTCCTCTTC TTCCTTCAAACCCTAGAGAGAGAAAAAAGAAGATTCTGATCTGATTCATCATCAAAAGGA AAGTGGGTACAAGTTTGAAGACAGAGATTTTTGGAAAAGAAAACACATCAATTTCATCAT CATCAGTATATCTTTTTGCTGTTTTTCAACCTACATAATCATTTCACCTAGACTTTCTTA CAAACACCTTATCTTCATGGATCTATCATAGTCCGACTTCCTTGGTGAAAGATAAACTGA AGTTTCAACTTTCTTTGTTACATTGAAGAAAAATGGCGCACACGGAGCACCCCACCACCA AAGGCCAAGCATGGTTTTGTACTACAGGATTACCCAGTGATATCATCATTGAAGTTGAAG ATATGACCTTCCATCTTCACAAGTTTCCCCTGATGTCAAAAAGTAGAAAGCTTCATGAAA TGATAACAGAGCAAGAGACAAATGCAAGTAGCAGTAAAATCCAAAAATCTGCTGAACGAG ACAACGATTGTGATGGTGATGAGGAGATTGAAGAAGAAGAGGATAATGAGGAGGACCAGC AATACTGTATTTCGTTCCCTGATTTCCCGGGAGGTTCAGAGACATTTGAGACGGCTGCCA AGTTCTGTTATGGTGTGAAAATCGAGTTGTCTGCATTGAACGTTGCTCCACTCCGCTGTG CGGGTGAGTACTTGGAGATGACTGAAGAGTACTCTGAGGATAACCTCATTTCCAAGACGG AGAGGTTTCTTTCACAGACAGTGCTAAAGAGTATTAAGGACTCCATTAGAACCCTAAACT CGTGCAAAAACATCTTGCCGTTAGCAGAAACACTCGGCATTGTTCAGAGATGCATTGATG CCGTTGCTGTTAGAGCTTCAGCTGCCGATCCGTCTCTCTTTGGCTGGCCGGTGAATGATC ACGGCCCTGGAAATGGAGTTGAAGCAAGTACTCGCCGTAAAGGTGCCAACAGAGGAGGTG GTATGGATTCATGGTTCGAAGAGCTAGGGCACTTGAGCTTGCCTTTGTTCAAGCGTTTGA TTTCTGCAATGAAAAGTAGAGATTTGTGTTCAGAAGTTATCGAGAGCTGTCTAATGTATT ATGCGAAGAAGTACATTCCAGGAATTTCACGCTCAAGTAGGAAGACATCGTCGTCTTCGA TACCATCGGAGAATGAACAGAGAGAGCTTTTGGAGACTGTAATTACCAACCTTCCTACAG AGATTAGCTCAAGAACTTCAACAACCACAAGGATTCTCTTCGGCTTATTGAGAACAGCAA ACATACTAAATGCTTCGGAAGCTGCTCGAGCTGCACTAGAGCGGAAAATCGGATCTCAAC TGGAGCACGCCACATTAGACGATCTTCTCATTCCAAGCTACTCTTATCTGAATGAAACGT TATACGATGTCGCTTGTGTGGAGAGAATATTAGGATATTTTTTAACCGGATTGGAAGAGA GGTCTACCGCTAGAATTCAAGGCGAAGAAGAAAACATCAGTGTCAGATCCACGGCGCTAA TGTTAGTCGGCAAGTTAATTGACGGTTACTTATCAGAAATAGCCTCTGATAATAATTTAC TACCGGAAAAATTCTGTGAATTAGCTGTTGCATTGCCGGACCAAGCAAGACTCTTTGATG ATGGCCTTTACAGAGCTGTCGATGTGTATCTCAAGGCGCATCCATGGATATCGGAAGCGG AGAGGGAGCAAATATGCGGAGTTATGGATTGCCAAAAGTTAACACTAGAGGCGTGTACAC ACGCAGCTCAGAATGAACGGCTTCCACTTAGAGCCGTAGTTCAGGTACTATTCTTCGAAC AACTCCAACTCCGGCAGGCAATCGCCGGAACTCTTATGGTCGCCGATGTGAATCCAGAAG AAATCCCGCGGCTGTCAATTATGGACGTGAGGGAAGAGGAGGGTGAAGGTGGGGAGCAAG AGGAAATGACAGGAGTAGTTGGAATGGGACGTGCACAGGAAGGTCGTAGCACGTGGAGGA AAACAGTGAGGGAGAATCAAGTGCTACGGTTGGATATGGATAGCATGAGGACGCGAGTAC AAGAACTTGAGCGCGAATGCTCCTCAATGAAGAAAGTAATCCAGAAGATAGATAAGGTAG GCAGCAGAGAAGGAGGAGGTGGGTGGAGAAAGAAGTTGGGATGTAAATTCAAGACACAAG TATGTGACTCGCATGAGCCAACGGTTGTGGAGGCCAAGAAAGGACGGGGACAGCGTCATC AACAATAAGAAACAAATCAATTTCTTTCTACTACCTAATGGTCTCTACTTTTAGTTTTAA ATTATAACACATCTGTTGTGCCGTAATTGAGAAATTTGTTCCCAACTTACTACTCCATTC TTTAGTGAACAGATTCTTTTTTGTTTGTAAGTTGTTGCGGTTTTCTATATTTAGCTCTCA ATGATGACAAAGGAAAAACACGGTAGTTGGAGAATTAAATTCAGTAATGTAACGTGTTTG AAAATTTGAATTTCACCACTTCCTTAAAAATT