Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g089940.3.1
CDS Infomation

BIPINNATA (AHRD V3.3 *** B2Y2H0_SOLLC)
Sequence

ATGGGAATAGCAACACAACCAATTACACTTCGTCCTTGTCACAAATATCCAGTAATTCAA
CAAGTTGTAGAAAATCTCAATTCTATGTCCCAAGATTATCATCACCACAGTCTCTTCAGT
TTCCCTAATGGGTTCGAGAGATCACAAGCCGAACAGCAGCAGCACCAGCACCAGCAAGCT
CAACAGATCCGTCGAGATAAATTGCGAGTGCAAGGATTCGAACCGTTTGAAGATGAAACA
AGTGGCCTACCAACAGTTTATGAGACTGCTGGAATGTTATCTGAGATGTTTAATTTCCCT
CCTGGAAACGCCGCAACCAACGCAGCGGAATTATTAGAAACTCAATTCAATCCGAATTTT
AGACAGCCGAATCCACGGATTCATGCTGCTGCTGCCATGGGGAACGAGTGGTTCGGCAAC
CACCGACAAGGTATGGTAGTGGGTGGAGGTGCAAGTAGTCAACCATTGGGATATGCAAAA
AATCATACGGACTCCATGCAACTTTTTCTAATGAATCCACAACCAAGGTCACCTTCTCCA
TCTCCTCCTAATTCAACTTCTTCTACGCTTCATATGTTGTTACCAAACCCATCATCTACT
CCAACACTTCAAGGGTTTCCTAATCCGGCCGAAGGATCTTTCGGTCAGTTCATGACATGG
GGGAATGGAGGAGCAAGTGCTGCTACAGCCACCCATCATCTCAATGCCCAGAATGAAATC
GGAGGGGTAAACGTCGTAGAAAGTCAAGGCCTATCTCTATCCTTGTCTTCTTCGTTACAG
CACAAGGCGGAGGAATTACAAATGAGCGGAGAAGCTGGAGGAATGTTGTTCTTCAATCAA
GGAGGGTCTAGTACTTCCGGTCAATATCGATACAAGAATATGAATATGGGTGGATCAGGA
ATAAGCCCAAACATTCATCAAGTCCATGTTGGGTATGGGTCATCCTTAGGAGTGGTCAAT
GTGTTGAGGAATTCCAAATACGCAAAAGCTGCCCAAGAACTACTGGAAGAATTCTGCAGT
GTTGGAAGAGGTAAATTGAAGAAGAATAACAACAAAGCAGCAGCCAATAACCCTAGTGGT
GGCGCTAACAATGAAGCTTCTTCAAAAGATGTTCCTACTTTGTCCGCTGCTGATAGAATT
GAACATCAGAGAAGGAAGGTAGATAGGAGGTACAATCATTACTGTGAACAAATGCAGATG
GTTGTGAATTCGTTTGATTTAGTGATGGGTTTCGGGGCAGCAGTTCCTTATACAGCACTA
GCACAGAAGGCAATGTCGAGACATTTCAGGTGTTTAAAGGATGCAATAGGAGCACAGTTG
AAGCAGAGTTGTGAGTTATTAGGAGAGAAAGATGCAGGAACTTCGGGATTGACTAAAGGA
GAAACTCCGAGGCTTAAGATGCTTGAACAAAGTTTGAGGCAACAAAGGGCGTTTCACCAA
ATGGGAATGATGGAACAAGAGGCTTGGAGACCACAAAGAGGCTTACCGGAACGTTCTGTC
AATATTTTAAGAGCTTGGCTTTTTGAGCATTTTCTACACCCGTACCCAAGTGATGCTGAT
AAACATCTGTTGGCAAGACAGACTGGTCTCTCCAGAAATCAGGTATCAAATTGGTTCATT
AATGCGAGGGTTCGGTTGTGGAAACCCATGGTAGAAGATATGTATCAACAAGAAGCCAAA
GATGAAGATGAGAATAGCCAAAGCCAAAACACAATCAATTCCTTCTCGGAAAACCAAGCT
ACTTTTACGACCAACATTCATGATCCCGACGCTTGCCGTCGCGGTAACTTTTCCGGTGAC
GATGGGACCACCACACATGATCATATGGGCTCCACCATGATAAGGTTTGGGACCACAGCT
GGTGATGTGTCACTCACCTTAGGGTTACGACATGCAGGAAATTTACCAGAGAATACTCAT
TTCTTTGGTTAA

Peptide Sequence

PEP ID

Solyc02g089940.3.1
PEP Infomation

BIPINNATA (AHRD V3.3 *** B2Y2H0_SOLLC)
Sequence

MGIATQPITLRPCHKYPVIQQVVENLNSMSQDYHHHSLFSFPNGFERSQAEQQQHQHQQA
QQIRRDKLRVQGFEPFEDETSGLPTVYETAGMLSEMFNFPPGNAATNAAELLETQFNPNF
RQPNPRIHAAAAMGNEWFGNHRQGMVVGGGASSQPLGYAKNHTDSMQLFLMNPQPRSPSP
SPPNSTSSTLHMLLPNPSSTPTLQGFPNPAEGSFGQFMTWGNGGASAATATHHLNAQNEI
GGVNVVESQGLSLSLSSSLQHKAEELQMSGEAGGMLFFNQGGSSTSGQYRYKNMNMGGSG
ISPNIHQVHVGYGSSLGVVNVLRNSKYAKAAQELLEEFCSVGRGKLKKNNNKAAANNPSG
GANNEASSKDVPTLSAADRIEHQRRKVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTAL
AQKAMSRHFRCLKDAIGAQLKQSCELLGEKDAGTSGLTKGETPRLKMLEQSLRQQRAFHQ
MGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFI
NARVRLWKPMVEDMYQQEAKDEDENSQSQNTINSFSENQATFTTNIHDPDACRRGNFSGD
DGTTTHDHMGSTMIRFGTTAGDVSLTLGLRHAGNLPENTHFFG*

Transcript Sequence

Transcript ID

Solyc02g089940.3.1
Transcript Infomation

BIPINNATA (AHRD V3.3 *** B2Y2H0_SOLLC)
Sequence

ATGGGAATAGCAACACAACCAATTACACTTCGTCCTTGTCACAAATATCCAGTAATTCAA
CAAGTTGTAGAAAATCTCAATTCTATGTCCCAAGATTATCATCACCACAGTCTCTTCAGT
TTCCCTAATGGGTTCGAGAGATCACAAGCCGAACAGCAGCAGCACCAGCACCAGCAAGCT
CAACAGATCCGTCGAGATAAATTGCGAGTGCAAGGATTCGAACCGTTTGAAGATGAAACA
AGTGGCCTACCAACAGTTTATGAGACTGCTGGAATGTTATCTGAGATGTTTAATTTCCCT
CCTGGAAACGCCGCAACCAACGCAGCGGAATTATTAGAAACTCAATTCAATCCGAATTTT
AGACAGCCGAATCCACGGATTCATGCTGCTGCTGCCATGGGGAACGAGTGGTTCGGCAAC
CACCGACAAGGTATGGTAGTGGGTGGAGGTGCAAGTAGTCAACCATTGGGATATGCAAAA
AATCATACGGACTCCATGCAACTTTTTCTAATGAATCCACAACCAAGGTCACCTTCTCCA
TCTCCTCCTAATTCAACTTCTTCTACGCTTCATATGTTGTTACCAAACCCATCATCTACT
CCAACACTTCAAGGGTTTCCTAATCCGGCCGAAGGATCTTTCGGTCAGTTCATGACATGG
GGGAATGGAGGAGCAAGTGCTGCTACAGCCACCCATCATCTCAATGCCCAGAATGAAATC
GGAGGGGTAAACGTCGTAGAAAGTCAAGGCCTATCTCTATCCTTGTCTTCTTCGTTACAG
CACAAGGCGGAGGAATTACAAATGAGCGGAGAAGCTGGAGGAATGTTGTTCTTCAATCAA
GGAGGGTCTAGTACTTCCGGTCAATATCGATACAAGAATATGAATATGGGTGGATCAGGA
ATAAGCCCAAACATTCATCAAGTCCATGTTGGGTATGGGTCATCCTTAGGAGTGGTCAAT
GTGTTGAGGAATTCCAAATACGCAAAAGCTGCCCAAGAACTACTGGAAGAATTCTGCAGT
GTTGGAAGAGGTAAATTGAAGAAGAATAACAACAAAGCAGCAGCCAATAACCCTAGTGGT
GGCGCTAACAATGAAGCTTCTTCAAAAGATGTTCCTACTTTGTCCGCTGCTGATAGAATT
GAACATCAGAGAAGGAAGGTAGATAGGAGGTACAATCATTACTGTGAACAAATGCAGATG
GTTGTGAATTCGTTTGATTTAGTGATGGGTTTCGGGGCAGCAGTTCCTTATACAGCACTA
GCACAGAAGGCAATGTCGAGACATTTCAGGTGTTTAAAGGATGCAATAGGAGCACAGTTG
AAGCAGAGTTGTGAGTTATTAGGAGAGAAAGATGCAGGAACTTCGGGATTGACTAAAGGA
GAAACTCCGAGGCTTAAGATGCTTGAACAAAGTTTGAGGCAACAAAGGGCGTTTCACCAA
ATGGGAATGATGGAACAAGAGGCTTGGAGACCACAAAGAGGCTTACCGGAACGTTCTGTC
AATATTTTAAGAGCTTGGCTTTTTGAGCATTTTCTACACCCGTACCCAAGTGATGCTGAT
AAACATCTGTTGGCAAGACAGACTGGTCTCTCCAGAAATCAGGTATCAAATTGGTTCATT
AATGCGAGGGTTCGGTTGTGGAAACCCATGGTAGAAGATATGTATCAACAAGAAGCCAAA
GATGAAGATGAGAATAGCCAAAGCCAAAACACAATCAATTCCTTCTCGGAAAACCAAGCT
ACTTTTACGACCAACATTCATGATCCCGACGCTTGCCGTCGCGGTAACTTTTCCGGTGAC
GATGGGACCACCACACATGATCATATGGGCTCCACCATGATAAGGTTTGGGACCACAGCT
GGTGATGTGTCACTCACCTTAGGGTTACGACATGCAGGAAATTTACCAGAGAATACTCAT
TTCTTTGGTTAA