Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g089630.3.1
CDS Infomation

Proline dehydrogenase (AHRD V3.3 *** A0A0H4CNX3_BETPL)
Sequence

ATGGCAAACAAAGTCGTATGTCCAAAGGTTTTTCGTGACCTCCGACGATTCGCTCGATGT
CTAAACACAGCTCCGACTGTCCCACCTATGAATTTCACCGGCAACTATGGTTCTACGAAC
GTAACAATACCGACGTTACAACCTACGGACCAAATATTAGTCAATCCTGAGAAAAAAGTA
CTCAATTTTGATGATGTTAAAGAGTTGTTTACGGGTGTATCCACCTCGAAGTTGATTAGA
TCATCGTTAACACTTCAAATGGCATCGATTGAGTCTATGGTTGACCTAGGTATTTGGGTA
ATGAATTCGAAATTCATGCGTATGCCAGTATTTAAGGAGGTGATACTAGGGTTTGTTAAA
AGGACATTTTATGAACATTTTTGTGCTGGAAAAGACTTAATTGAAGTAGGAAAGACGGTT
AGTAAGTTGTCGAGCCTTGATTTAAAAGGCATGCTTGATTATGGTGTGGAACATGCAATG
GATAATGAGTCTTGTGATCGAAGTATGAATGTTTTTCTTCAGACAGCCGAATTAACCAAG
TCTCTTCCATCCTCATCTGTCAGTTTTGTGGTAGTAAAAATAACTGCAATTTGTACACCA
AAGTTGCTCAAAAGAATGAGTGATTTACTGAGATGGGAACAGAAGGATCCTTCATTCAAT
CTTCCATGGAAGCAAAAGACGCTTCCACTTTTCGCCGAATCGAGTCCTTTTTATCACACG
TTGAAAAGACCAGAACCTCTAACAATTGAAGAAGAGCGTGATCTACAATTAGGTCGTGAT
AGACTTGAGAAAATTTGCAAGAAATGCCTGGAACTTGATGTTGAGTTACTCATTGATGCT
GAAGATACAGCTATTCAACCAGCGATTGATTACTTAGCATATTCAGCGGCAATTAAGTAT
CACAAAGAGGATCATCCTTTGTTATTTGGAACAATTCAAGCTTACTTAAAAGACTCAAAA
GAACGTATGATAATCGCTAAAAAGGCAGCAGAGAAAATGGGAGTTCCAATGGGGTTTAAG
CTTGTAAGAGGTGCTTATATGTCAAGTGAAAATCAATTGGCTTCAAGTTTAGGTTTTCAA
TCTCCAATTCACGATAGCATTGAATATACACATAATTGCTACAATTCTTGTGCTGAATTT
ATGTTTGATGAAATTGCTAATGGTTCAGGAGCTGTTGTTCTTGCTACTCATAATATTGAG
TCAGGAAAACTTGCTGCATCCAGGGCGATAGATTTAGGGATTAGAAAGGATAGTAAAAAG
CTCCAATTTGCTCAGCTATATGGTATGGCAGAAGGGCTTTCATTTGGGCTGAGAAATGCA
GGATTTCAAGTGAGTAAATATTTACCATTTGGACCTGTAGAGCAAGTTATGCCTTACCTT
ATTAGAAGAGCTGAAGAAAATAGAGGTCTTTTGTCTACATCTGCCTTCGATAGACAACTC
ATGAGGAAGGAGTTAATCAGAAGATTTGATGTGGCAACTGCATAA

Peptide Sequence

PEP ID

Solyc02g089630.3.1
PEP Infomation

Proline dehydrogenase (AHRD V3.3 *** A0A0H4CNX3_BETPL)
Sequence

MANKVVCPKVFRDLRRFARCLNTAPTVPPMNFTGNYGSTNVTIPTLQPTDQILVNPEKKV
LNFDDVKELFTGVSTSKLIRSSLTLQMASIESMVDLGIWVMNSKFMRMPVFKEVILGFVK
RTFYEHFCAGKDLIEVGKTVSKLSSLDLKGMLDYGVEHAMDNESCDRSMNVFLQTAELTK
SLPSSSVSFVVVKITAICTPKLLKRMSDLLRWEQKDPSFNLPWKQKTLPLFAESSPFYHT
LKRPEPLTIEEERDLQLGRDRLEKICKKCLELDVELLIDAEDTAIQPAIDYLAYSAAIKY
HKEDHPLLFGTIQAYLKDSKERMIIAKKAAEKMGVPMGFKLVRGAYMSSENQLASSLGFQ
SPIHDSIEYTHNCYNSCAEFMFDEIANGSGAVVLATHNIESGKLAASRAIDLGIRKDSKK
LQFAQLYGMAEGLSFGLRNAGFQVSKYLPFGPVEQVMPYLIRRAEENRGLLSTSAFDRQL
MRKELIRRFDVATA*

Transcript Sequence

Transcript ID

Solyc02g089630.3.1
Transcript Infomation

Proline dehydrogenase (AHRD V3.3 *** A0A0H4CNX3_BETPL)
Sequence

TCACAAACCAAACTTGACTTTGACCAAGTGAATCTCTATAAATATCATGCAACTTTTCAA
ATGTTACACATATTTTAGAATTTAGGCAGAAACAAAAAGAATTCATATTTTGTTAATTTT
CATTTCAATTTCATGGCAAACAAAGTCGTATGTCCAAAGGTTTTTCGTGACCTCCGACGA
TTCGCTCGATGTCTAAACACAGCTCCGACTGTCCCACCTATGAATTTCACCGGCAACTAT
GGTTCTACGAACGTAACAATACCGACGTTACAACCTACGGACCAAATATTAGTCAATCCT
GAGAAAAAAGTACTCAATTTTGATGATGTTAAAGAGTTGTTTACGGGTGTATCCACCTCG
AAGTTGATTAGATCATCGTTAACACTTCAAATGGCATCGATTGAGTCTATGGTTGACCTA
GGTATTTGGGTAATGAATTCGAAATTCATGCGTATGCCAGTATTTAAGGAGGTGATACTA
GGGTTTGTTAAAAGGACATTTTATGAACATTTTTGTGCTGGAAAAGACTTAATTGAAGTA
GGAAAGACGGTTAGTAAGTTGTCGAGCCTTGATTTAAAAGGCATGCTTGATTATGGTGTG
GAACATGCAATGGATAATGAGTCTTGTGATCGAAGTATGAATGTTTTTCTTCAGACAGCC
GAATTAACCAAGTCTCTTCCATCCTCATCTGTCAGTTTTGTGGTAGTAAAAATAACTGCA
ATTTGTACACCAAAGTTGCTCAAAAGAATGAGTGATTTACTGAGATGGGAACAGAAGGAT
CCTTCATTCAATCTTCCATGGAAGCAAAAGACGCTTCCACTTTTCGCCGAATCGAGTCCT
TTTTATCACACGTTGAAAAGACCAGAACCTCTAACAATTGAAGAAGAGCGTGATCTACAA
TTAGGTCGTGATAGACTTGAGAAAATTTGCAAGAAATGCCTGGAACTTGATGTTGAGTTA
CTCATTGATGCTGAAGATACAGCTATTCAACCAGCGATTGATTACTTAGCATATTCAGCG
GCAATTAAGTATCACAAAGAGGATCATCCTTTGTTATTTGGAACAATTCAAGCTTACTTA
AAAGACTCAAAAGAACGTATGATAATCGCTAAAAAGGCAGCAGAGAAAATGGGAGTTCCA
ATGGGGTTTAAGCTTGTAAGAGGTGCTTATATGTCAAGTGAAAATCAATTGGCTTCAAGT
TTAGGTTTTCAATCTCCAATTCACGATAGCATTGAATATACACATAATTGCTACAATTCT
TGTGCTGAATTTATGTTTGATGAAATTGCTAATGGTTCAGGAGCTGTTGTTCTTGCTACT
CATAATATTGAGTCAGGAAAACTTGCTGCATCCAGGGCGATAGATTTAGGGATTAGAAAG
GATAGTAAAAAGCTCCAATTTGCTCAGCTATATGGTATGGCAGAAGGGCTTTCATTTGGG
CTGAGAAATGCAGGATTTCAAGTGAGTAAATATTTACCATTTGGACCTGTAGAGCAAGTT
ATGCCTTACCTTATTAGAAGAGCTGAAGAAAATAGAGGTCTTTTGTCTACATCTGCCTTC
GATAGACAACTCATGAGGAAGGAGTTAATCAGAAGATTTGATGTGGCAACTGCATAA