Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g089620.3.1
CDS Infomation

proline dehydrogenase
Sequence

ATGGCCAATAAAGTTTTTTGTCCGAAACTCCTTAAGAACCTCGGATTTCATGTCCGCCGT
TTAAACTCAGCTCCGTCACCTCTTTCCGCCGTCCCACCGCTAAATTTTACTGGCGATTTT
AACGCCGTGGAACCCGCACAACAAATTAACACAACCCTTCACCACCACCACGACCATCAC
AACATTATCAATTTCGATGATGTTAAGGAGCTTTTCTACGGTGTTCCCACCACGAAACTG
ATTCGATCTTCGATGACGTTACAAATGGCTGCTATTGATCCCATGGTTGATTTGGGCATG
TGGGTAATGAATTCTAAACTTATGGAAATGCCTATTTTTAGGGAGGTTATTCTTGGGTTT
GTTAAAAATACATTTTATGAACATTTTTGCGCCGGCAAAGACTTAACGGAAGCTAGACGG
ACCGTTACTAATCTATCGGATTCTGGGTTAAAAGCCATGCTTGATTATGGGGTGGAACAT
GCCACCGATAATGAATCTTGTGAACAGAGTACTGCGGCGTTTATTCAAACGATTGAATCA
ACCAAATCACTTCCCGAATCTTCTGCAAGTTTTGTGGTAGCAAAGATAACTGCTATTTGT
ACCCCAAGGCTTCTCAAAAGAATGAGTGATTTGTTAAGATGGGAACAGAAAGATCCATCA
TTTAATCTTCCATGGAAGCGAGAGTCGCTTCCCCTTTTCGCCGAATCGAGCCCTGTTTAT
CACACTTGTAGCAAACCAGAGCCTCTATCGGTAGAGGAAGAGCGTGATCTTCAATTAGCT
CATGAAAGACTTAGAAAAATTTGCGAGAAATGTTTGGAACATGAAGTTCCATTACTAATT
GATGCGGAAGACACAACCATTCAACCTGCAATTGATTATTTTGCGTATTCAGCAGCAATT
AAGTATCACAAAGATGATCAGCCTTTGATATTCGGAACAATTCAAGCTTACTTGAAGGAC
GCCAAGGAACGAATGGTTATTGCGAAAAAGGCTGCAGAGAAAATGGGAGTTCCAATGGGA
TTTAAGCTTGTGAGGGGCGCTTATATGTGTAGTGAAAAGGAATTGGCTTCTACATTAGGA
TTCAACTCTCCAATTCACGACAGCATTGAGCAAACACACGCTTGCTTCAATTCGTGCGCG
GAGTTTATGATTGAAGAGATTGCTAATGGTTCTGGTGCAGTTGTTCTCGCCACTCATAAC
ATTGAATCAGGAAAACTTGCTGCAACCAAAGCTATAGATTTGGGAATAAAAGATGAGAGA
CAAAATCTCCAATTTGCTCAGCTATATGGTATGGCAGATGGGCTTTCATTTGGGCTGAGA
AATGCAGGATTTCAAGTAAGCAAATATTTACCATTTGGTCCTGTAGAGCAGATTATGCAT
TACCTTATGAGGCGTGCTGAAGAAAACAGAGGCATGCTGTCTACATCGGCATTCGACAGA
CAACTCATGAGGAAGGAATTGAGCAGGAGATTCGAAGTGGCTACTTCTTAA

Peptide Sequence

PEP ID

Solyc02g089620.3.1
PEP Infomation

proline dehydrogenase
Sequence

MANKVFCPKLLKNLGFHVRRLNSAPSPLSAVPPLNFTGDFNAVEPAQQINTTLHHHHDHH
NIINFDDVKELFYGVPTTKLIRSSMTLQMAAIDPMVDLGMWVMNSKLMEMPIFREVILGF
VKNTFYEHFCAGKDLTEARRTVTNLSDSGLKAMLDYGVEHATDNESCEQSTAAFIQTIES
TKSLPESSASFVVAKITAICTPRLLKRMSDLLRWEQKDPSFNLPWKRESLPLFAESSPVY
HTCSKPEPLSVEEERDLQLAHERLRKICEKCLEHEVPLLIDAEDTTIQPAIDYFAYSAAI
KYHKDDQPLIFGTIQAYLKDAKERMVIAKKAAEKMGVPMGFKLVRGAYMCSEKELASTLG
FNSPIHDSIEQTHACFNSCAEFMIEEIANGSGAVVLATHNIESGKLAATKAIDLGIKDER
QNLQFAQLYGMADGLSFGLRNAGFQVSKYLPFGPVEQIMHYLMRRAEENRGMLSTSAFDR
QLMRKELSRRFEVATS*

Transcript Sequence

Transcript ID

Solyc02g089620.3.1
Transcript Infomation

proline dehydrogenase
Sequence

ATGGCCAATAAAGTTTTTTGTCCGAAACTCCTTAAGAACCTCGGATTTCATGTCCGCCGT
TTAAACTCAGCTCCGTCACCTCTTTCCGCCGTCCCACCGCTAAATTTTACTGGCGATTTT
AACGCCGTGGAACCCGCACAACAAATTAACACAACCCTTCACCACCACCACGACCATCAC
AACATTATCAATTTCGATGATGTTAAGGAGCTTTTCTACGGTGTTCCCACCACGAAACTG
ATTCGATCTTCGATGACGTTACAAATGGCTGCTATTGATCCCATGGTTGATTTGGGCATG
TGGGTAATGAATTCTAAACTTATGGAAATGCCTATTTTTAGGGAGGTTATTCTTGGGTTT
GTTAAAAATACATTTTATGAACATTTTTGCGCCGGCAAAGACTTAACGGAAGCTAGACGG
ACCGTTACTAATCTATCGGATTCTGGGTTAAAAGCCATGCTTGATTATGGGGTGGAACAT
GCCACCGATAATGAATCTTGTGAACAGAGTACTGCGGCGTTTATTCAAACGATTGAATCA
ACCAAATCACTTCCCGAATCTTCTGCAAGTTTTGTGGTAGCAAAGATAACTGCTATTTGT
ACCCCAAGGCTTCTCAAAAGAATGAGTGATTTGTTAAGATGGGAACAGAAAGATCCATCA
TTTAATCTTCCATGGAAGCGAGAGTCGCTTCCCCTTTTCGCCGAATCGAGCCCTGTTTAT
CACACTTGTAGCAAACCAGAGCCTCTATCGGTAGAGGAAGAGCGTGATCTTCAATTAGCT
CATGAAAGACTTAGAAAAATTTGCGAGAAATGTTTGGAACATGAAGTTCCATTACTAATT
GATGCGGAAGACACAACCATTCAACCTGCAATTGATTATTTTGCGTATTCAGCAGCAATT
AAGTATCACAAAGATGATCAGCCTTTGATATTCGGAACAATTCAAGCTTACTTGAAGGAC
GCCAAGGAACGAATGGTTATTGCGAAAAAGGCTGCAGAGAAAATGGGAGTTCCAATGGGA
TTTAAGCTTGTGAGGGGCGCTTATATGTGTAGTGAAAAGGAATTGGCTTCTACATTAGGA
TTCAACTCTCCAATTCACGACAGCATTGAGCAAACACACGCTTGCTTCAATTCGTGCGCG
GAGTTTATGATTGAAGAGATTGCTAATGGTTCTGGTGCAGTTGTTCTCGCCACTCATAAC
ATTGAATCAGGAAAACTTGCTGCAACCAAAGCTATAGATTTGGGAATAAAAGATGAGAGA
CAAAATCTCCAATTTGCTCAGCTATATGGTATGGCAGATGGGCTTTCATTTGGGCTGAGA
AATGCAGGATTTCAAGTAAGCAAATATTTACCATTTGGTCCTGTAGAGCAGATTATGCAT
TACCTTATGAGGCGTGCTGAAGAAAACAGAGGCATGCTGTCTACATCGGCATTCGACAGA
CAACTCATGAGGAAGGAATTGAGCAGGAGATTCGAAGTGGCTACTTCTTAAATTCATATT
CAGAATATGAAATCTATATTAGTAAGTAAGAAATAATAAACGAGGAAACATCGCCGACTA
CTGTAAATAATTCAATGATGTGAGGGCAAAAATTGATGAGGATGATCAAAGCAACCTGGA
TGGGTAAAATGCATGAGGAGGAAGTCAGTTTTTATCTTTGTGTGTGTTATGAAAAATAAA
AAAATTGTACATATTTATTTTAGGTCCACTACTTGTATCTTTCTCCATGTGCTATTTTTT
AGGTTCTATTATATTTACTATATAATGTACTAGTTCCTTAAGTTGGTTTTTATTTGGTAT
CGTGTTTTAGAAATAGAAATGGAAGAAGGTATTCCCAGAGTGGAGCCAAAATGTCGAAAT
TACAAAGTGTGTATCAGTTTCTCTCTCTCTATCGAGACATTATGAAATAAATCGGATTTA
TTGGCCTTTAATTAACATTT