Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g089360.3.1
CDS Infomation	SMAD/FHA domain-containing protein (AHRD V3.3 *** A0A061ENF0_THECC)
Sequence	ATGACGACTGACATGAACCCGCCGCCGCCCCGGAACCCTAAAACCGCCGCGGTTGTAACC CAGGAACCTCATGCTTCAAACTTAGATGAAGTTTCGACCTCAAACTCTACTCAAACTTCA ATGAAACCCCCACTTCTAAGCAATTCGGATTCAGATTCGGATTCATCCAAACAATTCGAT CAACAGAAGTCCCAATCACAACCTTTTATTTCTCAAAGTGATTCAGAACCTACTAGTGAT TCAGAACCTACTAGTGTCAATGCCCAAAAAGACTCCAACTTGAGTTTAATGAAACCTCCA CCTCCAAAATTCCTTAGCAAGTCGAACTCGGATAAAATTGGTGCTGAACATGAACAAAGT GCCAATTCTCAAGATGACTCCAGCTCTGTGTCCCGAAGTAACGACACCAATGAAGACAAA AAGCAAGAACAACGATCAGCTGCTTCGGTTCCGTACACGATTCCGACCTGGAGTGGGCGT CCGTGTCATCGGTTTTATCTTGAAGTGCTTAAAGATGGATCGATCATTGATAAATTTGAT GTGCACAAGAAGGGGGCGTACATGTTTGGGCGTGTTGATCTTTGTGATTTTGTTCTTGAA CACCCGACCATCTCTCGCTTTCACGCTGTTTTACAGTTCAAGGGAAACGGCAATGCTTAT GTTTATGACCTTGGTAGTACACACGGGACATTTGTTAATAAAAAAGAGGTGACAAAGAGA GTTTTTGTGGATCTCCATGTTGGTGATGTCCTTCGATTTGGACAATCATCACGATTATAC ATATTTCAAGGACCAACTGACTTGATGCCACCGGAAGCTGACCTGAAGAGGGTAAGACAA GCGAAGATCCGGGAAGAGATGCATGACATGGAATCATCACTTCTCCGTGCAAAACTGGAA GCATCTCGTGCAGATGGGATCTCATGGGGAATGCGTGATGATGCTATTGAGGAGAACGAG GATGAAGTTGACGAAATAACTTGGCAAACTTACAAGGGACAGCTTACAGAGAAGCAGGAA AAAACACGTGAAAAAGTTGTGAAAAGACTTGAAAAGATTGCTCATATGAAAAAAGAGATA GATGCTATTCGGGCCAAGGATATTTCTCAAGGTGGATTGACACAGGGACAACAAACTCAA ATTGCTCGTAATGAACAGAGGATATCACAGATAGTGGAAGAGCTTGAAAACTTGGAAGAG ACTTTAAATGAGAGTATACGGGAAAGTCTTGGTGCACGCACTGGAAGGACATCCAATGGA AAGAAAAAGGAGCCTGAAGAAGAGGAGTTTTCAAGTGAGGAGGATGAATTCTATGATCGC ACACAGAAGCCTTCAAAGAGAAAAGTTGGCGAAAATCAATCAATTGAGACAGCTGATTCT CTTCTTGATAAGAAGGATGCCATTGTCAGGGAAATGGAAGACAAGAGAAAATTATTTCTT GATGAAAAGGATGGTACAGGTCAGGAAAGTGCAGTTGAAGCTGGAGATGAACTAGATGCT TACATGTCTGGCCTTTCATCTCAGCTAGCTCTGGAGAAGGAGGAAAAGCTTCACAAGGAA CTCGCTACTCTCCAGACGGAGTTGGACAGGGTACTTTACTTGCTTAAGATTGCTGATCCT ACTGGTGAGGCTGCTAAAAAGAGGGAGCTGAAAGTACAAGAACCAAAGACCAATATGACC AAAACTGTTGCAACTGCTGCCCGTCAGCAGCCTCCACCCGAGCAGAACAAAAAAGATAGA GCAGAACCTAAGGTTTTAATGGAGAAACAGGATACTATTGATGCGAACTCTTCATTCAGT CAAGAAACAAAGAAGGAGATTGTGGCTGATGCAGCTGGTGGTAAAAATGTTGTGTACATT GCTAGTAAGCCCCAATGGCTTGGTGCTGTAGATGAAAAGAAAAAACAAGAGAAAGTTATT GAACGACAGACAGAACTGCAAGACAATGATCAATTTGTTGACTACAAAGACAGGAATAAA GTTTTGGTAAAACCAGATGCTACACAGTTGACTGCTGACTCTGGAATTGAAAGTGCAGCT CCTGGACTAATAATAAGGAAGCGCAAGCAAGTTGAGAAGTCTGATGTTACTGAAGTCAAA CATTCTCAAGAATCCACTGGAGCTGATTTACAAGCAGAAGATGCGGTAGCTCTGCTGTTG AAACATTCTCAAAGATACCATAGTACTGATGATGAAGTGGAATCCAGCGGAGGTGATGTA TCACATGAAAGTCAAACGAGGAAGGAAAAGAAAAAAAAGCAAAAGAAGGTTCTTGGTCCA GACAGACCATCATTTCTGAAGAGTGAGAAGGATTACAATTCTTGGGTTCCTCCTGAAGGG CAATCAGGTGACGGACGCACCTCACTGAATGATCGTCTTGGTTACTGA

Peptide Sequence

PEP ID	Solyc02g089360.3.1
PEP Infomation	SMAD/FHA domain-containing protein (AHRD V3.3 *** A0A061ENF0_THECC)
Sequence	MTTDMNPPPPRNPKTAAVVTQEPHASNLDEVSTSNSTQTSMKPPLLSNSDSDSDSSKQFD QQKSQSQPFISQSDSEPTSDSEPTSVNAQKDSNLSLMKPPPPKFLSKSNSDKIGAEHEQS ANSQDDSSSVSRSNDTNEDKKQEQRSAASVPYTIPTWSGRPCHRFYLEVLKDGSIIDKFD VHKKGAYMFGRVDLCDFVLEHPTISRFHAVLQFKGNGNAYVYDLGSTHGTFVNKKEVTKR VFVDLHVGDVLRFGQSSRLYIFQGPTDLMPPEADLKRVRQAKIREEMHDMESSLLRAKLE ASRADGISWGMRDDAIEENEDEVDEITWQTYKGQLTEKQEKTREKVVKRLEKIAHMKKEI DAIRAKDISQGGLTQGQQTQIARNEQRISQIVEELENLEETLNESIRESLGARTGRTSNG KKKEPEEEEFSSEEDEFYDRTQKPSKRKVGENQSIETADSLLDKKDAIVREMEDKRKLFL DEKDGTGQESAVEAGDELDAYMSGLSSQLALEKEEKLHKELATLQTELDRVLYLLKIADP TGEAAKKRELKVQEPKTNMTKTVATAARQQPPPEQNKKDRAEPKVLMEKQDTIDANSSFS QETKKEIVADAAGGKNVVYIASKPQWLGAVDEKKKQEKVIERQTELQDNDQFVDYKDRNK VLVKPDATQLTADSGIESAAPGLIIRKRKQVEKSDVTEVKHSQESTGADLQAEDAVALLL KHSQRYHSTDDEVESSGGDVSHESQTRKEKKKKQKKVLGPDRPSFLKSEKDYNSWVPPEG QSGDGRTSLNDRLGY*

Transcript Sequence

Transcript ID	Solyc02g089360.3.1
Transcript Infomation	SMAD/FHA domain-containing protein (AHRD V3.3 *** A0A061ENF0_THECC)
Sequence	CACTAAGTTCATCTTCCCGTCTTAGAATGACGACTGACATGAACCCGCCGCCGCCCCGGA ACCCTAAAACCGCCGCGGTTGTAACCCAGGAACCTCATGCTTCAAACTTAGATGAAGTTT CGACCTCAAACTCTACTCAAACTTCAATGAAACCCCCACTTCTAAGCAATTCGGATTCAG ATTCGGATTCATCCAAACAATTCGATCAACAGAAGTCCCAATCACAACCTTTTATTTCTC AAAGTGATTCAGAACCTACTAGTGATTCAGAACCTACTAGTGTCAATGCCCAAAAAGACT CCAACTTGAGTTTAATGAAACCTCCACCTCCAAAATTCCTTAGCAAGTCGAACTCGGATA AAATTGGTGCTGAACATGAACAAAGTGCCAATTCTCAAGATGACTCCAGCTCTGTGTCCC GAAGTAACGACACCAATGAAGACAAAAAGCAAGAACAACGATCAGCTGCTTCGGTTCCGT ACACGATTCCGACCTGGAGTGGGCGTCCGTGTCATCGGTTTTATCTTGAAGTGCTTAAAG ATGGATCGATCATTGATAAATTTGATGTGCACAAGAAGGGGGCGTACATGTTTGGGCGTG TTGATCTTTGTGATTTTGTTCTTGAACACCCGACCATCTCTCGCTTTCACGCTGTTTTAC AGTTCAAGGGAAACGGCAATGCTTATGTTTATGACCTTGGTAGTACACACGGGACATTTG TTAATAAAAAAGAGGTGACAAAGAGAGTTTTTGTGGATCTCCATGTTGGTGATGTCCTTC GATTTGGACAATCATCACGATTATACATATTTCAAGGACCAACTGACTTGATGCCACCGG AAGCTGACCTGAAGAGGGTAAGACAAGCGAAGATCCGGGAAGAGATGCATGACATGGAAT CATCACTTCTCCGTGCAAAACTGGAAGCATCTCGTGCAGATGGGATCTCATGGGGAATGC GTGATGATGCTATTGAGGAGAACGAGGATGAAGTTGACGAAATAACTTGGCAAACTTACA AGGGACAGCTTACAGAGAAGCAGGAAAAAACACGTGAAAAAGTTGTGAAAAGACTTGAAA AGATTGCTCATATGAAAAAAGAGATAGATGCTATTCGGGCCAAGGATATTTCTCAAGGTG GATTGACACAGGGACAACAAACTCAAATTGCTCGTAATGAACAGAGGATATCACAGATAG TGGAAGAGCTTGAAAACTTGGAAGAGACTTTAAATGAGAGTATACGGGAAAGTCTTGGTG CACGCACTGGAAGGACATCCAATGGAAAGAAAAAGGAGCCTGAAGAAGAGGAGTTTTCAA GTGAGGAGGATGAATTCTATGATCGCACACAGAAGCCTTCAAAGAGAAAAGTTGGCGAAA ATCAATCAATTGAGACAGCTGATTCTCTTCTTGATAAGAAGGATGCCATTGTCAGGGAAA TGGAAGACAAGAGAAAATTATTTCTTGATGAAAAGGATGGTACAGGTCAGGAAAGTGCAG TTGAAGCTGGAGATGAACTAGATGCTTACATGTCTGGCCTTTCATCTCAGCTAGCTCTGG AGAAGGAGGAAAAGCTTCACAAGGAACTCGCTACTCTCCAGACGGAGTTGGACAGGGTAC TTTACTTGCTTAAGATTGCTGATCCTACTGGTGAGGCTGCTAAAAAGAGGGAGCTGAAAG TACAAGAACCAAAGACCAATATGACCAAAACTGTTGCAACTGCTGCCCGTCAGCAGCCTC CACCCGAGCAGAACAAAAAAGATAGAGCAGAACCTAAGGTTTTAATGGAGAAACAGGATA CTATTGATGCGAACTCTTCATTCAGTCAAGAAACAAAGAAGGAGATTGTGGCTGATGCAG CTGGTGGTAAAAATGTTGTGTACATTGCTAGTAAGCCCCAATGGCTTGGTGCTGTAGATG AAAAGAAAAAACAAGAGAAAGTTATTGAACGACAGACAGAACTGCAAGACAATGATCAAT TTGTTGACTACAAAGACAGGAATAAAGTTTTGGTAAAACCAGATGCTACACAGTTGACTG CTGACTCTGGAATTGAAAGTGCAGCTCCTGGACTAATAATAAGGAAGCGCAAGCAAGTTG AGAAGTCTGATGTTACTGAAGTCAAACATTCTCAAGAATCCACTGGAGCTGATTTACAAG CAGAAGATGCGGTAGCTCTGCTGTTGAAACATTCTCAAAGATACCATAGTACTGATGATG AAGTGGAATCCAGCGGAGGTGATGTATCACATGAAAGTCAAACGAGGAAGGAAAAGAAAA AAAAGCAAAAGAAGGTTCTTGGTCCAGACAGACCATCATTTCTGAAGAGTGAGAAGGATT ACAATTCTTGGGTTCCTCCTGAAGGGCAATCAGGTGACGGACGCACCTCACTGAATGATC GTCTTGGTTACTGAATGGTAGAGATTTTGATCGTTTGACACATAACTAACTATGGGATGG GGTAGCTCGGCTTACAGATTGCTGATGGATCATGTAACTAAATAGCATTTACAGCTTGGT TTGAGATCTCATCTTGCGAAAATCCTTCACAGGGACATCTGAGCGAGAACATTTGTTGTT TGAAGAGAAGAAAAGAAATAGAAAACGTGAAGATACAAGAGCTGGATTATGATCCCATTC TCCCACTCTTGCTCCTGTACCTTCTGTTAACAAGAACCTGACACCTTCCTGATTGAATTG TATATAGAGATTGACTCGGAAAGGATAGAGATAATGAGAAAATGTGCTTGTAATGCAATG CTTTGTGCCCGCTCCAAAAAAGCTCATAAGTGATTTTGTGTAGCATGATACAAGTCGATT TTATTTTTGTATAATGTGTTCGACAACCAATTAATCAAGATTTTCAATGCACGAAGGCCC AATAGAAAGGGAACAGCTACCGTTTCTCTATTCTCAATATTTGATTCCAAAAACATCTGA TTAAGAGTGAGAGATTGTATTCTTCTGAAGGCATGGAATTTTACATTTGAAAGCCATACC TCAAAGCTGACACCTTTTGGGAGAAAATAATTCTGCAGAATCTTATCATTCACCCTTAAA ACCCCCAATCATAGTTGTGTTCAGGGGAACAACATAATTCTCTAGTGATTTTTCATACAC TTCAGAAGTAGCTGTGCTTCATTGATCTTTACCAAAAGTCTCAACAGCCTTATCTGCTCC CAGAAACCTTTAAGTTCATATAGAACAGTCCAGTATAAATCGAATCCACCATCTTTTACA AGCAAAATCAGCTGCAAAATCGCTTTCGTTTTAAAAGCCCAGATGAAAAATCGAAAACTC AGTTCATGATTCTTCCGTTGAGCTTCTAGAATAGAAGATACAGTGTTACGACAAAGGAAA TAAAACATGTACAACCATTTTCCCGATAGAAAGAGAATGACTTGGAAGAAACTGAACGAT ACATTTGAGAATTTAGGAGTTTCAACTCTGAACAGAGAGAATTAATATACTCAAAGTGAT GTACTTTAACCGGAGATATCGGGAGGGTGGCCGGCGGCGGTTATTAAGATACTCAAGAGT CGAAAAATCAGTTAGTTGCTGTAAAAGCTACTAAAATAGTCTTGAGAGAGAGAGAGAGAT TGCTTTAGTATAATAGCCCATTCAAACGCCAAGTTGGCCTTGGATTAGATGACTTGAACA TTCTATAATTCTTATGGTACACCAATAAATATCACTTAAGATATAATCATAATAATAATA TAAAATAAGTCTCACAAAAAAAGCTGCATAATCATAACCATGCTATTGTACTTGTAGCTA GCCCAATCTTCTTCTATATAATTGGGACCTAACATTACTAGCTAATACACCACTTGAGAC AACAAGTGTTGATTAATTAATTAATACTACTAGATTTGACAGAAGTTGGGTGTCTGCAGT CACATTTTAATACAATATGGATGATCATGGGCACTTTGGGCCACCTCTTTTGGTCTTCCA GTTATTGTAGCAAGGGCAACTTTGCTTATTGCCATAGGT