Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g088600.3.1
CDS Infomation	Pentatricopeptide repeat-containing-like protein (AHRD V3.3 *** A0A0B0P8M8_GOSAR)
Sequence	ATGGTACACGTGATAAAGAACTTTCCTACTTTAGCAGTTTCTTTAGATAATAATCGATTG TTCTGTTCAAGAGCTCTTTATAGTGGAAAAGGTTTTACTAGTTCTAGATTGGTTAATGCT TTTGAGCGATGCAGTTTGTTTGGAATTGAACAGATTAAGTTGTCAACTGTTTTATTTAAC ATCAAGGAAGTGAATAACCTGTGTGACATAGCTCTGAATGTCGCTTGTGAGATAGAACCT ATGTGTGGTGAAGAGACTGAGGGTTCTGATATTGAAAAAGATAATTCAGCCAAAGATCAA TATAGCCTAGAATTGTTTGGTAAGGACTGTTTGATGGATTCGTTTACTGAAAGATATGAT ACAAACCAACCTTCAAGTTCTCTTGAAGAAACTAAAAGTTCAGTTGACAACGGGATTCTA TACCTAGAAGAAATGGATGAGAAGGTATTGTCAGAAAGGATCTTGAAGCTCAGCAGGCTA AATAAACATAAAAGTGCATTGGTGATATACAAGTCGATGATTTTTTCAGGTCTTAAACCT GATTTACATGCATGTAATTCCCTTCTTTCAAGTCTCTTGAGGAATGGAATGCTTGATAAT GCATTAAAAGTATTCAACTCCATGAAGGCTAGTGGGCTGACAACCGGCCACACTTATAGC TTAATTCTGAAGGCAGTTGCTGATGCTCGGGGTTATGACAGAGCAATAAACATGTTCCGT GAATTGATAAGCAGTAGAAATCTTAGAGAACAAATTGATATTATTGTATACAACACAATG ATATCCATCTTTGCAAAAGCAAACAACTGGGATCAGGCACAGAAGATTTGGAAAATTTTG CAGTATGATGGTCAAGTTGGAACAACAGTCACTTACCGTCTGTTAATTTGCACATTTGTT CGTTGTGGTCAGTATGAACTAGCTATTGATGCATATAGTGAGATGATTCATAATGGGTTG AGCCCAGAGAGTGATACGATGCATGCTATTATTGGAGCATACAGTAGGGAGGGTAAGTAT GACTCTGCATTGAATATCTTGCAATGTATGTTGGACAGTGAGCTTAAGCCAAATGCGAGA GCATGCAACATAGTGATCAACTCACTTGGAAAAGCTGGCAAAGTCAAGCTTGCATTTGAG ATTTATGATCTGATGAAATCATTAGGTCATGCACCTGATGTATACACATGGAATTCCTTG CTTAATGCCTTAAACAGGGCAAATCGATATTGTGATGCAATTCAGCTCTTTGAGAGAGTA AGAAATATCCGAAGTGTTATTTTGAATGAGCATATATACAATACTGTTTTGACATCATGC CACAGACTTGGGTTGTGGGAGAAAGCTGTACAGGTACTCTGGCACATGGAGGCTTCTGAA CTCCCAGTTTCAACTGCATCCTATAATCAAGTCATTGGAGCTTGCGAGGTAGCAAGAAGA CCCAAAGTTGCATTACAAGTGTATTACCGCATGGTTCGCCAAAACCGTTCTCCTGACATA TTTACTCTATTGTCATTGATGAGGGTATGCATTTGGGGTTCTCTCTATAATGAAGCTGTG GAAATACTAAAATTTTCTGAACCAAATGGATCACTTTACAATGCTGCTATACAAGGGATG TGTTTAACAGGAAGGCTTGATTTGGCTAAGAAGCTGTACACAGAAATGCGTGAGAGAAGC CTTCAACCTGATGGCAAGACACGGGCTATGATGTTGCAAAACTTACCAAAAGATTCCAGG AGAAATAGAAAACCCTGGACAGTGATTAACCAGTGGAGGACAGGACCCAGTTGGGTTTGC GGAGTCACATGGCAAAGCATTCAGATTCAACAATTATATAGCATGACCATTGGTCTTTGC CCTCCATGCAAGCACACCGAAAGCCGCCATTAA

Peptide Sequence

PEP ID	Solyc02g088600.3.1
PEP Infomation	Pentatricopeptide repeat-containing-like protein (AHRD V3.3 *** A0A0B0P8M8_GOSAR)
Sequence	MVHVIKNFPTLAVSLDNNRLFCSRALYSGKGFTSSRLVNAFERCSLFGIEQIKLSTVLFN IKEVNNLCDIALNVACEIEPMCGEETEGSDIEKDNSAKDQYSLELFGKDCLMDSFTERYD TNQPSSSLEETKSSVDNGILYLEEMDEKVLSERILKLSRLNKHKSALVIYKSMIFSGLKP DLHACNSLLSSLLRNGMLDNALKVFNSMKASGLTTGHTYSLILKAVADARGYDRAINMFR ELISSRNLREQIDIIVYNTMISIFAKANNWDQAQKIWKILQYDGQVGTTVTYRLLICTFV RCGQYELAIDAYSEMIHNGLSPESDTMHAIIGAYSREGKYDSALNILQCMLDSELKPNAR ACNIVINSLGKAGKVKLAFEIYDLMKSLGHAPDVYTWNSLLNALNRANRYCDAIQLFERV RNIRSVILNEHIYNTVLTSCHRLGLWEKAVQVLWHMEASELPVSTASYNQVIGACEVARR PKVALQVYYRMVRQNRSPDIFTLLSLMRVCIWGSLYNEAVEILKFSEPNGSLYNAAIQGM CLTGRLDLAKKLYTEMRERSLQPDGKTRAMMLQNLPKDSRRNRKPWTVINQWRTGPSWVC GVTWQSIQIQQLYSMTIGLCPPCKHTESRH*

Transcript Sequence

Transcript ID	Solyc02g088600.3.1
Transcript Infomation	Pentatricopeptide repeat-containing-like protein (AHRD V3.3 *** A0A0B0P8M8_GOSAR)
Sequence	TTATCTTTACTTTTCTTCCTCAATTCGAAATTTTTACTTGACTGTAGCATGAATTCCCAT CCGTGTCTCCATTAGTGTGCTGAAGAAGTCAAGTCTCTCTCAATCTACATATTCTACTCT GCCTTCTAAAGTTCAGGTAATTTTTCATTTCTTCGAGCTCTTGACGAAACTCGAAGGAGA AGTACTGTTGAAGGTTGAATGGTTCTTGCGGATAACAAATATTACATGCATATTTGTCCT ATTCCCATTATCAATTCTTTAATTTGCTCAAATTGAACGGTAAAGATTGGAACTTTGATT GATGATGGTGTTCAAACTCTATTGAATTTCTTCGGGCGGTGGCTCCAAGTTCTAGTGTTG ATTTAGGTGAGAAATTCTTTGTCTTATGAGGTTGTTGTACCTTGTGGAGCGAGTATGGTA CACGTGATAAAGAACTTTCCTACTTTAGCAGTTTCTTTAGATAATAATCGATTGTTCTGT TCAAGAGCTCTTTATAGTGGAAAAGGTTTTACTAGTTCTAGATTGGTTAATGCTTTTGAG CGATGCAGTTTGTTTGGAATTGAACAGATTAAGTTGTCAACTGTTTTATTTAACATCAAG GAAGTGAATAACCTGTGTGACATAGCTCTGAATGTCGCTTGTGAGATAGAACCTATGTGT GGTGAAGAGACTGAGGGTTCTGATATTGAAAAAGATAATTCAGCCAAAGATCAATATAGC CTAGAATTGTTTGGTAAGGACTGTTTGATGGATTCGTTTACTGAAAGATATGATACAAAC CAACCTTCAAGTTCTCTTGAAGAAACTAAAAGTTCAGTTGACAACGGGATTCTATACCTA GAAGAAATGGATGAGAAGGTATTGTCAGAAAGGATCTTGAAGCTCAGCAGGCTAAATAAA CATAAAAGTGCATTGGTGATATACAAGTCGATGATTTTTTCAGGTCTTAAACCTGATTTA CATGCATGTAATTCCCTTCTTTCAAGTCTCTTGAGGAATGGAATGCTTGATAATGCATTA AAAGTATTCAACTCCATGAAGGCTAGTGGGCTGACAACCGGCCACACTTATAGCTTAATT CTGAAGGCAGTTGCTGATGCTCGGGGTTATGACAGAGCAATAAACATGTTCCGTGAATTG ATAAGCAGTAGAAATCTTAGAGAACAAATTGATATTATTGTATACAACACAATGATATCC ATCTTTGCAAAAGCAAACAACTGGGATCAGGCACAGAAGATTTGGAAAATTTTGCAGTAT GATGGTCAAGTTGGAACAACAGTCACTTACCGTCTGTTAATTTGCACATTTGTTCGTTGT GGTCAGTATGAACTAGCTATTGATGCATATAGTGAGATGATTCATAATGGGTTGAGCCCA GAGAGTGATACGATGCATGCTATTATTGGAGCATACAGTAGGGAGGGTAAGTATGACTCT GCATTGAATATCTTGCAATGTATGTTGGACAGTGAGCTTAAGCCAAATGCGAGAGCATGC AACATAGTGATCAACTCACTTGGAAAAGCTGGCAAAGTCAAGCTTGCATTTGAGATTTAT GATCTGATGAAATCATTAGGTCATGCACCTGATGTATACACATGGAATTCCTTGCTTAAT GCCTTAAACAGGGCAAATCGATATTGTGATGCAATTCAGCTCTTTGAGAGAGTAAGAAAT ATCCGAAGTGTTATTTTGAATGAGCATATATACAATACTGTTTTGACATCATGCCACAGA CTTGGGTTGTGGGAGAAAGCTGTACAGGTACTCTGGCACATGGAGGCTTCTGAACTCCCA GTTTCAACTGCATCCTATAATCAAGTCATTGGAGCTTGCGAGGTAGCAAGAAGACCCAAA GTTGCATTACAAGTGTATTACCGCATGGTTCGCCAAAACCGTTCTCCTGACATATTTACT CTATTGTCATTGATGAGGGTATGCATTTGGGGTTCTCTCTATAATGAAGCTGTGGAAATA CTAAAATTTTCTGAACCAAATGGATCACTTTACAATGCTGCTATACAAGGGATGTGTTTA ACAGGAAGGCTTGATTTGGCTAAGAAGCTGTACACAGAAATGCGTGAGAGAAGCCTTCAA CCTGATGGCAAGACACGGGCTATGATGTTGCAAAACTTACCAAAAGATTCCAGGAGAAAT AGAAAACCCTGGACAGTGATTAACCAGTGGAGGACAGGACCCAGTTGGGTTTGCGGAGTC ACATGGCAAAGCATTCAGATTCAACAATTATATAGCATGACCATTGGTCTTTGCCCTCCA TGCAAGCACACCGAAAGCCGCCATTAA