Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g088540.3.1
CDS Infomation	TRNA/rRNA methyltransferase family protein (AHRD V3.3 *** A0A061EEZ7_THECC)
Sequence	ATGAGCGCCTGCAAAACCCTAGTTCGCTCTTCAATTTCCTTTTTTCAGTTTCAAACGCGA AACAGCTACCAGAGAAGTTTCTCTTCTCACATTTCATCGAATTTTTCTTTTTTCCGGCCG CTGCCTCTACTCTCTCGTAATCCAGCATTCAGAATCGAACCGTGTAGAGATCCTTCAAGA CGATATGGCAGCACTCAAGGAGCAATTTCACTGGAAACGTCAGAGGAAATGGCAGTTCCC CGTGTTGCCGTTGAAAGTTCGGAGGAAAAATCCAAAGACACAGTAGAGGAGTTACTGTAC AACAAAGATGATGTCTCAAAGCTGATGAAAATGGAACGCAGGCTTGATACCGAAGGCCTG GGTCATCAGGAGCGTTGGTTTCCATATTTGGATAAAGTTAAGGCGGGAAGTATGTATTTG AGTAGTTCGGAGATATTGGAAGCAGTGACCCCGTATATAATGGATTCGAGGAAAGAGAGG TTTCGCCATGCGGTAAAGAATCGGACATATTCAGTATGTTTGGTAGTTGAAGGTTTGAGT GATTTTGGCAATGTGTCAGCTACATTTCGCTCAGCTGATGCACTGGGCATTCAATCAGTC CATGTTGTAGCTTGTGATAGCTCAAAAAGGTACAGGGAGAATCGACATGTCAGCATGGGA GCTGAGAAATGGTTGGATATCGAACTATGGGATTCTGTTCATGAGTGCTTCACAGTTTTG AAATCACGTGGTTATCGCATTGCGACAACACATCTTGGAATGGACACGGTTTCTGTGTAT GATATGGACTGGTCATGCCCAACTGCAATTGTTGTGGGAAATGAACTTAGGGGAATAAGT GACGAGGCTCTTGAATCATCAGACTTGCACTGCAGTATTCCAATGAAAGGCATGGTAGAC TCGTTCAATGTTTCTGTTGCTGCTGGCCTTCTTATGCACCATGCCGTCTGTGACAGAACT TCTCGCTTGGGATGCCATGGGGATCTAACTCGTGAGGAAAGCCGAATCTTGCTAGCAGAG TTTTCTTTGCGCCACAATGATAATGCAATTAGAATTGCTCAAGAATATGCAGAAAGAAAG ATAGCTGAGCTTAAATCAAAGCTTTGA

Peptide Sequence

PEP ID	Solyc02g088540.3.1
PEP Infomation	TRNA/rRNA methyltransferase family protein (AHRD V3.3 *** A0A061EEZ7_THECC)
Sequence	MSACKTLVRSSISFFQFQTRNSYQRSFSSHISSNFSFFRPLPLLSRNPAFRIEPCRDPSR RYGSTQGAISLETSEEMAVPRVAVESSEEKSKDTVEELLYNKDDVSKLMKMERRLDTEGL GHQERWFPYLDKVKAGSMYLSSSEILEAVTPYIMDSRKERFRHAVKNRTYSVCLVVEGLS DFGNVSATFRSADALGIQSVHVVACDSSKRYRENRHVSMGAEKWLDIELWDSVHECFTVL KSRGYRIATTHLGMDTVSVYDMDWSCPTAIVVGNELRGISDEALESSDLHCSIPMKGMVD SFNVSVAAGLLMHHAVCDRTSRLGCHGDLTREESRILLAEFSLRHNDNAIRIAQEYAERK IAELKSKL*

Transcript Sequence

Transcript ID	Solyc02g088540.3.1
Transcript Infomation	TRNA/rRNA methyltransferase family protein (AHRD V3.3 *** A0A061EEZ7_THECC)
Sequence	CTAGTGGACGAAAGGGTTTAGTAATATACTAACAAGTTTCTCATGTTTTATCGCATCTAA ATAAAGAAGAAGGATGTCCGAAATGTAGTTGGGCTTAAGATGGGATTGACCCAAATTGAA CGCGGTCTTGACGGCGTCGTTCCGTTTTTCCTTGTCCAGTCCATTTCAATCCTCGGCTGA ATTTCCATTTCCGCCTCCGAGTAGCAGTGAGGTAAGTGATAGAAGAATCACATGCAATGA GCGCCTGCAAAACCCTAGTTCGCTCTTCAATTTCCTTTTTTCAGTTTCAAACGCGAAACA GCTACCAGAGAAGTTTCTCTTCTCACATTTCATCGAATTTTTCTTTTTTCCGGCCGCTGC CTCTACTCTCTCGTAATCCAGCATTCAGAATCGAACCGTGTAGAGATCCTTCAAGACGAT ATGGCAGCACTCAAGGAGCAATTTCACTGGAAACGTCAGAGGAAATGGCAGTTCCCCGTG TTGCCGTTGAAAGTTCGGAGGAAAAATCCAAAGACACAGTAGAGGAGTTACTGTACAACA AAGATGATGTCTCAAAGCTGATGAAAATGGAACGCAGGCTTGATACCGAAGGCCTGGGTC ATCAGGAGCGTTGGTTTCCATATTTGGATAAAGTTAAGGCGGGAAGTATGTATTTGAGTA GTTCGGAGATATTGGAAGCAGTGACCCCGTATATAATGGATTCGAGGAAAGAGAGGTTTC GCCATGCGGTAAAGAATCGGACATATTCAGTATGTTTGGTAGTTGAAGGTTTGAGTGATT TTGGCAATGTGTCAGCTACATTTCGCTCAGCTGATGCACTGGGCATTCAATCAGTCCATG TTGTAGCTTGTGATAGCTCAAAAAGGTACAGGGAGAATCGACATGTCAGCATGGGAGCTG AGAAATGGTTGGATATCGAACTATGGGATTCTGTTCATGAGTGCTTCACAGTTTTGAAAT CACGTGGTTATCGCATTGCGACAACACATCTTGGAATGGACACGGTTTCTGTGTATGATA TGGACTGGTCATGCCCAACTGCAATTGTTGTGGGAAATGAACTTAGGGGAATAAGTGACG AGGCTCTTGAATCATCAGACTTGCACTGCAGTATTCCAATGAAAGGCATGGTAGACTCGT TCAATGTTTCTGTTGCTGCTGGCCTTCTTATGCACCATGCCGTCTGTGACAGAACTTCTC GCTTGGGATGCCATGGGGATCTAACTCGTGAGGAAAGCCGAATCTTGCTAGCAGAGTTTT CTTTGCGCCACAATGATAATGCAATTAGAATTGCTCAAGAATATGCAGAAAGAAAGATAG CTGAGCTTAAATCAAAGCTTTGAGTAAGCAATCAAACTAGTTTACAAGGAAGATGTGCCT ATTTGCAAAGCACCAGGTCCTCCATGTATATGCCCAGACATTTCAACAACTGAAAAGCTG AGTGTTTGGGTTTCGTTCTGGTGCAGCTTATGTATAGTAAAATTTCACTCCTGTTCTTTG TTTTTCTTACATTGAACAGCCATATTTAGTTATCAATGGCTTCACGGTTTATTGTATTTG TTAATTTCATAGAGAATCGCTCATGTTTAGGGGTTAATGTGTGTGAACTATATCACCATT TTTGAAAGACTTAATAACATATTTGTTGCCTATTTTCTTTTTTTCGAAAATACTTTAGCT AACCTCTCGAATAAAATAAGCTAAACGATTG