Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g088270.3.1
CDS Infomation

DUF1997 family protein (AHRD V3.3 *** G7KKZ0_MEDTR)
Sequence

ATGAAAGTAGGTTTTGTGGCAGTGGCAGTTCCCTCTGTTTGTGCAACGTTGCAGCAGGGG
AAAATCAGAAGCAGAGGGTTTCAATTATTCAAGAGAAATATACGAGTGTTGACTCCATTC
CATGAATATGAAACAAAATACTATAATCCCATTAAGGCTCATCAACAGAGTTACGATTCA
CAAATCACCATTTTAGCTGACATGCCCCTCTTTGAATCCCCCCATGCATCTTTCGATAGG
TACATGGAGGACAAACCAAGAGTTTTGAAAGCTATTTCCCCTGATAACAGAGGAACCCAA
CGTATAAACGAGGAAGAATGGAGAATTCGAATGGAACCAATAGGTTTCTTGTTCCTCACA
GCGTGGCCAGTTGTTAACATGAGACTTAGATGCAAAACTAACGGAAAAGAATACCCTCCT
GGCGTTCCAAACCATACTTCTATGGTTCTTGAGTTCAAAATTACAAAATGGGATCTAGAA
GGAGTAACAGAGGGAAAAAACAAGCCATCAGAATTCCGTCTTAGCATGGAAGGTGTACTT
TACCCAGATAGAAGAATTAGCAGGATCAAAGGTCGTTTACACATGAGCATTAGCTTCGCT
CCACCTCCCATGCTTGCGTTGGTCCCTCCACATGTTCACAAAGATGTCACGCAAGCGGTC
ATGAAGAATATGGCGGAGAGTATGCAACATAAAGTAAGAAATAATTTGCTCGCTGATTAT
GCTAAATTCAAGAAGGAAAATCCCCAGCCATAA

Peptide Sequence

PEP ID

Solyc02g088270.3.1
PEP Infomation

DUF1997 family protein (AHRD V3.3 *** G7KKZ0_MEDTR)
Sequence

MKVGFVAVAVPSVCATLQQGKIRSRGFQLFKRNIRVLTPFHEYETKYYNPIKAHQQSYDS
QITILADMPLFESPHASFDRYMEDKPRVLKAISPDNRGTQRINEEEWRIRMEPIGFLFLT
AWPVVNMRLRCKTNGKEYPPGVPNHTSMVLEFKITKWDLEGVTEGKNKPSEFRLSMEGVL
YPDRRISRIKGRLHMSISFAPPPMLALVPPHVHKDVTQAVMKNMAESMQHKVRNNLLADY
AKFKKENPQP*

Transcript Sequence

Transcript ID

Solyc02g088270.3.1
Transcript Infomation

DUF1997 family protein (AHRD V3.3 *** G7KKZ0_MEDTR)
Sequence

GCAAATATGTGCCTGCCCCTAACCCCATTGTTATCCTTTACTTTGTTCTGCGAGAAGTGT
GGATTAAAACTAAGCGCTTGTTTGGTACAAGGCATTACTAAAGGATTAATTTAGGATGAG
TTTGTTTCATGTCTAGTTGGGATTAAAATGTGGGATAACTTATCACGGGATTATAGTGTT
ATTTTGATCCCCACATTGGAGTAACAATCTCGAATAATTAATTTCGAAACAACTTGTTCC
AACGCAAATTAATGAGCTAAGTGAAGAACTATTCATCTTACCAGCAGCATTTTCTATCAA
AATCAGAATCAAAAGGATCTCCTTATATGTTTCTTGCCACACTATCAAAGGTTTCCTTTG
TTCATCTAATGTAAGAGTTAAGATGAGGCGTCATCTATCTAGCTATAATGATCATTCGGT
TTAATCACTAGTAAATTGAAGGCAAAAGATTTTACCAAATATACTTCAACTAAACCTAAA
AGGATCAAGATCAAGAGCGAAAAATTCAATTAATACAAAGAAGAGAAATTGAGTGCTCAC
ATATTTCTTGCGACCATAGCCTTCATCATCATCACCACGCCTCTCGTAGCTGGGTTTCCT
GTAGTCCTCCTCGGATCTTCCATAGTGAGGCCTCTCGTACCCTTCGCCTTCCTCAGCCTG
GTAGCTTGGACGCCCATAACTCGGCCTCTCACCTTCCTCTTGTCCATAGCTAGGCTTCCT
GCCATAGCCACCAGATCCGTATTCTTCGGATTCGTTCCTACGCCCATAACCCGACCCGTA
TTCAGAGCTTGGCTCCTCGTATTCACTCTTCTTCCGATACCCTGATCCGTATTCGGAAGC
GGGTTCTTCATACTCGCTTCTCCTTCCATACTGGGGAGTGGGTTCTTCATATTCACTCTT
TCTCCCATACCCAGATCCGTATTCAGAACTTGGCTCTTGATACTCACTCTTCCTCCCATA
CCCAGATCCATATTGGGGAGTGGGTTCTTCATACTCACTCTTCCTCCCATACCCAGATCC
ATACTCAGAACTAGGCTCTTCATACTCACTCTTCCTTCCATACCCAGATCCATACTGGGG
TTTAGGCTCTTCGTACTCACTCTTTCTCCCATACCCAGATCCATATTCTGATGTGGGCTC
TTCTTCATACTCACTCTTCCGTCCATACCCAGATCCATATTCACTTTCTCCGCCAGGGCG
ATTCACCCCAGGCTGAAACCCATAATCAGCTTGAGGCTGCTCATAAGTATGAGTTTCCTC
AGATGGACGATAAGAAGGGGTGGGGCGAGGCTTAGGCCTCGAATAGCTCTGGTACTCATT
ATCAAGAGCCTCATCACCATAAGCAGAAGGCTCAGCATACGAAGTGTACTGAGGACGATC
ATAGTCGAACTCATCAGAAGCTGAGGAAGGCTGATAACAGGTTTCCTCAGATGGCGGAAG
TGGGCGACCATAAGTCAAAGCAATGTCGTATCCACCACCATAAGGAGTTGGATCGTACTC
ATCAAATTCAGTGCCGTCGTCATCGTGGTGGCCTTTAGGGTAGTAAGACATTTTTGCAGG
GATTCTAAACTCTTCAATTCCGATTATACAGATCTTGAACTGAGCAAATCCTCCTATATC
TTAGAAGAAACAAAACGGCGTCGTGCCACCTTCTCCGTGTTTCTCTTTCTTCCGCAAACC
ACGGCAAAATCGCGTCCAATTTGTAAATATTACGTAACTTCCTCTCTAGTTCAAATATTT
AGCCAACAAGTCCAAACTTTTCAACTATTTCAAAATTTAGGCTCCAAATGATCATATTTC
GTGCATATCATTCCTTGACAAAGTTGTGTAAGAGGTTGATTGATACAATCGATAAGGCTA
ATTGGTTTGGAAGATTTATTTATTTTATATTTGATTTGAGATATTATTAATTAATTTTAA
AATTAATTATCTCACGTGAAATATTTTATCCACATGATTATCATAATAAGAAACCACTCA
TATGCTTATTGTATTGGAACTCACATTCTTTCACGTCTCAATTCTTTTAAGTTTTCGATC
AATTCAAATATTAAAAAATTGAATAAAAGACATTAAAAATTCTCTTCCCTTTTTAATCTA
AGTTGGCATATGTATACATGTGTAGGGGTATTAACAAGGACTAAGCCACGTAGAGACGTT
TTCCTTCGTTAAAAATTACACTTATAAATGATAAAGATAATTTATATATATGATAAATAT
TGGATTATGTTTAACTTTTTAGTGTTTACAATTTTTCATATTTTGAATCGTAAAATACTA
TCTCAAACACTTAGTAGTAGCTTATGTAAGATTCTGAAATTTTAAGATAATAGAGTAAAC
AAAAGAAACCTACCACAGATATAAGTTATAACATTATAAGAAATATATTTTTGTAATTCA
TTCAGTTTAGAAGTTGTGATTTGTCAATGATATTTTTCAAAGGAAAATACAGAAATTGGC
GTTTAATATTTTTTTCCGAAAAATCAGAGTATCTGTCAATTACTATATAGGTTGAATAAG
ATGGAAATGTTTAGATGTAAAAAGAAGACGGGTAGGTCAATTACACAATCAACTAGTAAA
GTAAATGGCGTCTAAACAACAAATACATGATGGCATAACGCTTGCCCTTTCTCAAAATAG
ATGCAACTTCCACGCAAACAACTCCATTAGAGTATATATACATATTTTAAAACTCAAATT
ATCAACTAATCGATCATGAAAGTAGGTTTTGTGGCAGTGGCAGTTCCCTCTGTTTGTGCA
ACGTTGCAGCAGGGGAAAATCAGAAGCAGAGGGTTTCAATTATTCAAGAGAAATATACGA
GTGTTGACTCCATTCCATGAATATGAAACAAAATACTATAATCCCATTAAGGCTCATCAA
CAGAGTTACGATTCACAAATCACCATTTTAGCTGACATGCCCCTCTTTGAATCCCCCCAT
GCATCTTTCGATAGGTACATGGAGGACAAACCAAGAGTTTTGAAAGCTATTTCCCCTGAT
AACAGAGGAACCCAACGTATAAACGAGGAAGAATGGAGAATTCGAATGGAACCAATAGGT
TTCTTGTTCCTCACAGCGTGGCCAGTTGTTAACATGAGACTTAGATGCAAAACTAACGGA
AAAGAATACCCTCCTGGCGTTCCAAACCATACTTCTATGGTTCTTGAGTTCAAAATTACA
AAATGGGATCTAGAAGGAGTAACAGAGGGAAAAAACAAGCCATCAGAATTCCGTCTTAGC
ATGGAAGGTGTACTTTACCCAGATAGAAGAATTAGCAGGATCAAAGGTCGTTTACACATG
AGCATTAGCTTCGCTCCACCTCCCATGCTTGCGTTGGTCCCTCCACATGTTCACAAAGAT
GTCACGCAAGCGGTCATGAAGAATATGGCGGAGAGTATGCAACATAAAGTAAGAAATAAT
TTGCTCGCTGATTATGCTAAATTCAAGAAGGAAAATCCCCAGCCATAACTGTAAGAGTAA
CTTCCCAATTAAGCAAAAATCAGAACAACTCTTCTTTTTCTTTTTCCATACTAGAAAACA
AAGTGTGAATTTTGTTTGTGTGTAATTGCGTGGGCTTTAGTATTTGTTCAACTAATGAAA
ATCAGGGCAGATACTCCTTCGTTAATAATAGTAATCTCGTGTACGCAACAGGCAAATAAG
AGCCAAGGACAAAAGGGCAATACAATTAAATTTGGAACCAAAAGAGCAAAATTTACACAG
TAAATTTTATGGTACTAAAATTAGATAAATAATGCGCAATGTAAATAGTGTAAAAACTGA
AGATTTTTTTGTCAGAAGGGGACGCAAGGTCCTTGCGCATTACAAGGTTAATGGGTGACC
TGCGCCTCTCCCATTTTTAGAATTTTGGTATCTTCTTTGTATTAAAAAAGTTATCGATGG
TTAAAATATCATAAATCAAAAGCTATTTTATATCTAG