Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g088010.3.1
CDS Infomation

Defective in cullin neddylation protein (AHRD V3.3 *** K4BBV7_SOLLC)
Sequence

ATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGAT
ATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTT
ACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGGCG
ACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAGGCAGACTTCTCT
GAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAAC
ATCACTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTA
CTTGATCACTGGTGCGACTTTGTTGAGAAAAAACAGCGATATAATATATCTGAGGATACT
TGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGG
GAAGGAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAGGGTTGGAGGA
GTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTT
GAGGATTCTTACCCTGGATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAAT
TTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCG
AAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACAT
GGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTCTGCATCTCCCTGCGCT
GTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAG
TTTGATAAAGAAAGGAGAACTTCCTATACATAA

Peptide Sequence

PEP ID

Solyc02g088010.3.1
PEP Infomation

Defective in cullin neddylation protein (AHRD V3.3 *** K4BBV7_SOLLC)
Sequence

MDSPAANHLDIFDIYGRYCDIMSGAYATRNLVDELQKARFTREALNQLMKLVDSSLHIRA
TIFEEVYKLKLRLNLEADFSEFSRFYDFVFFVFRENGQKNITISKAVTGWKIVLAGRFRL
LDHWCDFVEKKQRYNISEDTWQQVLAFSRAVHENLEGYDREGAWPVLIDDFVEHMYRVGG
VDTISNSFCCSCGNSGAQPFEDSYPGLINFPGMKRKSCGNLQRVEESSHGDPGMDVIVNS
KRRHVNFGNQNVDWTENQSHGYSEMVKANSPLNHSASPCAVEGCLSKGFAGLLSGPSCLQ
FDKERRTSYT*

Transcript Sequence

Transcript ID

Solyc02g088010.3.1
Transcript Infomation

Defective in cullin neddylation protein (AHRD V3.3 *** K4BBV7_SOLLC)
Sequence

GAAGCGAAGGATGACGGTGTCACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCG
GTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGA
AAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCC
AGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTC
GATATCTACGGCCGATACTGTGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTA
GATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTG
GATTCAAGTTTGCATATAAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGG
TTGAATTTGGAGGCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTT
TTCAGAGAAAATGGACAAAAGAACATCACTATAAGTAAAGCTGTTACTGGTTGGAAAATA
GTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAGAAAAAACAG
CGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCAT
GAAAATCTTGAAGGATATGATCGGGAAGGAGCTTGGCCTGTTTTGATTGATGATTTTGTT
GAGCACATGTACAGGGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGT
GGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTGGATTGATAAATTTTCCTGGT
ATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCA
GGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTT
GACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTA
AATCATTCTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTG
TTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAA
GGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAA
GTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATT
AAATTCGAACTGTAATCTTTCTGATGCTTCTTTAAATCCTCTGACGTGTCCAGACGCATG
ACATTTGTGGAGCAAATCGAGAGGTAATAAAAAGAGTTGTATGATCTAGGAAATTAGTTT
GATATATAAGTTATGTTATAGGACCTATCCCTTAACTGTTGCTTTCATGATGATTACTGC
TAAATTTTCTTAAATTTGCAAGTGGAACAGTAAATTTATTAGTTGATAAAATATTCAATT
ACAAGGGAATTCGAATTGTTTCGGATGCTCATTAGCTGAGCCAAAGGCGCAAGTGAAAAT
CATGGATATGTACTAAATTATTACTATTAGGGTATTTAGGAATGATCATTGTGTAGGAAA
CCAAAATTAGCTAGGATTTGATACTCCTTTCGTCCTTATTTAGTTGTCGATTTTAGAAAT
GACGCACATATTAAGATAGCAATAATTAGCATATTAAAGTTATAATTTTATCAATTTTGT
CATTTTGGAATTCTATTTATATACACAACTATTGTTCATTATACATTATTAGTATATATA
TTTGGTAATATTTGTGGTTTATTATTTATTACAAGTTGTTTTATTGGTGGTATTTATCCT
GTTACTTTATTGTCATAATTTTCTTCTTTTTAACCTATTTCGGTGAAGTGGTGTTGTTTG
GAAGGTTCATCAAGTTTTCCTTTATTCTATTGATGATTTAACTAATTTTTCTTTAAGTAA
TTGTGACAATCTAAAATAATAATTTTTCTATCGCATAAAAATAAAAGTAAGTTTTACCTT
AGGATTTTAATTTTTGGTACTTATTATTATGAATAATTATGTAAAACGTATATAACAACC
ATTTTGGTTAAATTAATACTAACAAATTTTTTACATTGTCAGCAGAATTAAAATCTTATG
TCTTTTTTTTTTTTAAAAAAAAGATGAGTAACTATTGAAAAAGAAAAAGGACTCCAAAAA
CATTCTACCTTACAATGAAAGTTGTTTTTGTAGTACGAGGACAAGTAGATAACATAAAAG
TAGGCCTTTATATGGAGACTAAAGAAAAGATAACAAGCTTAAGCTAGTGTGGATGATAAA
AAGAAGATCAAAAGAGAAAAGTTAAAAGGTACTCTACTACTATATACTCTAA