Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g087980.3.1
CDS Infomation	Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC)
Sequence	ATGGCCGTAGATAAGGAATTCTCGAACTCCCACGAATCCAATAATGAGTCATCTCATCCT GGATCTAGACCTCCGAGGCTATTCATTAAAGAGATGGTGATGAGAAACTTCAAATCTTAT GCCGGCGAACAGCGCGTTGGCCCATTCCACAAGAGTTTTTCTGCAGTTGTTGGTCCTAAT GGTAGTGGAAAGAGTAATGTCATCGACGCAATGCTCTTCGTCTTCGGAAAGCGGGCCAAA CAGATGCGTCTAAACAAAGTGTCAGAGCTCATCCACAATTCAAGTAACCATCAGAATTTG GAAAGTGCTGGCGTGTCTGTTCATTTTCAGGAAATTATAGATTTGGATGATGAGACATAT GAGGCTGTTCGTGGAAGTGATTTTGTAATCACACGTGTGGCATTTCGAGATAATTCCTCT AAGTACTATATCAATGACCGGACAAGTAACTTTACAGAGGTCACTAAGATGTTGAAAGGG AAAGGGATTGATCTAGATAACAACCGATTTCTGATTCTTCAGGGTGAGGTTGAACAAATA TCACTGATGAAGCCTAGAGGACAAGGACCACATGATGAAGGCTTTCTTGAGTATTTAGAG GATATTATCGGAACCGACAAATATGTTGAGAAGATTGATGAATCATTCAAGCAGCTAGAA GTCCTCAATGAAAGAAGGTCTGGTGTTGTTCAAATGGTTAAGTTAGCTGAGAAAGAAAGA GATAACTTGGAGGGAGTGAAGAATGACGCAGAAGCCTACATGCTTAAAGAATTATCACTT CTCAAATGGCAAGAGAAAGCAACAAAATTGGCTTTTGAAGATAATTCAACTCGATTTACA GAGATGCAGGCGAACATTTCTAGACAAGAAGAGATTCTTAAAAGTGAAAGGGAGAAAATT AAGGAAAATAGCAAGTCATTGAAGGACCTTGAGTCAAAACATTCGAAGTTTCTGAAAAGA CAAGAGGAGCTTGATAACGATCTGAGGCGCTGCAAGGATGAGTTCAAGGAATTTGAGAGG CAAGATGTAAAGTATCGAGAAGATTTGAATCACTTGAAGCAGAAGATAAAGAAACTGACT GATAAAATTGATAAGGATTCTCGTAAAATTTCTGACACAACTAATGAGTGTGAGGAGTCT GCAAATCTTATTCCAAAATTGGAGAAAGATATTCCAGGCTTGCAACAACTTTTGGTGGAT GAGGAGAAAATTTTAGATGAAATAAAGGAGAATTCTAAAGTTGAAACCGAGGCTTTCCGC AGTGAGCTTTCTGCTGTTCGGTCTGAATTAGAGCCTTGGGAAAAGCACTTAATTGAGCAC AAGGGAAAGCTTGAAGTGGCATCAACTGAAAGTAAACTTTTGAGTGAAAAGCATGAGGCT GGTCGTGCTGCCTATATTGAAGCACAAGAGCAGATTGTGGAAATACAGAAACGAGTAGAG ATAAAATCGGCAAGCTCAAAAAACATCGCCAATGAGCTTGAGAAGAACAAGGTTAAAGCA CTTGAGGCTCGAGCTGTTGAAAAGGAATGCCTTCAAGAACAAGAAAGATTGATACCTCTT GAACAAGCGGCCAGACAAAAGCTTACTGAGCTTTCATCTGTTATGGAATCTGAAAAGAGC CAGGGATCTGTCCTAAAAGCAATAATGCATGCTAAGGAGGCAAATGTGATAGATGGCATA TATGGTCGAATGGGTGACTTGGGTGCGATTGATGCAAAGTATGATGTTGCCATATCAACC GCATGTTCTGGGCTTGATTATATTGTTGTAGAAACTACAGCAGCAGCACAAGCATGCGTG GAGCTTCTTCGAAGCAAAACCCTCGGCGTAGCAACTTTCATGATTTTGGAAAAACAAGCT CATTATTTGCCTAAAATCAGAGAGAAAGTCAGAACGCCAGAAGGAGTCCCACGCCTTTTT GATTTGGTGAAAGTTCGAGATGAGAGGATGAAACTAGCATTTTTTGCTGCATTAGGAAAT ACAGTTGTTGCAGAAGATATTGATCAGGCATCACGTATTGCCTACGGTGGGGACAGAGAG TTTCGCCGTGTTGTAACACTTGAAGGTGCTCTTTTTGAAAAATCTGGAACAATGAGTGGT GGAGGGGGTAAACCTCGTGGTGGTAAAATGGGCACATCTATCCGTGCTGCTAGCGTTTCA CCAGAGGCTATATCTGCTGCTGAAAATGAACTTTCACAGATCGCCGGAAACTTGGATAAT GTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCT CTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAGATTGATAGCCTGAAGTCCCAATGC GATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAA GTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGG CTTACACAGGGTTCAAAACAGCTGAAAGAGAAGGCTTCAGAACTTCAAAATAAAATAGAG AATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGAT ATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAA ATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTT GCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTT CAAGAGGACTATAAAAAGATACAGGAGCTCATTGATCAGCACAAAGGTATTCTGATTGAT GCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTA GATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGG AAAGGATACAAGAAAAAACTCGATGATTTGCATACTGCTTTGTCGAAGCATATTGAGCAA ATTCAAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGATGTTACTCTT GGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTC AAAGAGATGAACCCAAATCTTGACTCGATTTCTGAGTATCGGAAAAAAGTATCTGTGTAC AATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAA TATGATGAGTGGAGAAAGAGAAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCT TTGAAACTTAAAGAAATGTATCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTG GTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAG AGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGACCCTCAGCTCATTGGCTCTT GTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCT GCTTTAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGAT GCACAGTTCATAATCATAAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTT GGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTA GTTTCTCAAAAAGCTGCTTGA

Peptide Sequence

PEP ID	Solyc02g087980.3.1
PEP Infomation	Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC)
Sequence	MAVDKEFSNSHESNNESSHPGSRPPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPN GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSSNHQNLESAGVSVHFQEIIDLDDETY EAVRGSDFVITRVAFRDNSSKYYINDRTSNFTEVTKMLKGKGIDLDNNRFLILQGEVEQI SLMKPRGQGPHDEGFLEYLEDIIGTDKYVEKIDESFKQLEVLNERRSGVVQMVKLAEKER DNLEGVKNDAEAYMLKELSLLKWQEKATKLAFEDNSTRFTEMQANISRQEEILKSEREKI KENSKSLKDLESKHSKFLKRQEELDNDLRRCKDEFKEFERQDVKYREDLNHLKQKIKKLT DKIDKDSRKISDTTNECEESANLIPKLEKDIPGLQQLLVDEEKILDEIKENSKVETEAFR SELSAVRSELEPWEKHLIEHKGKLEVASTESKLLSEKHEAGRAAYIEAQEQIVEIQKRVE IKSASSKNIANELEKNKVKALEARAVEKECLQEQERLIPLEQAARQKLTELSSVMESEKS QGSVLKAIMHAKEANVIDGIYGRMGDLGAIDAKYDVAISTACSGLDYIVVETTAAAQACV ELLRSKTLGVATFMILEKQAHYLPKIREKVRTPEGVPRLFDLVKVRDERMKLAFFAALGN TVVAEDIDQASRIAYGGDREFRRVVTLEGALFEKSGTMSGGGGKPRGGKMGTSIRAASVS PEAISAAENELSQIAGNLDNVRQRITDAVKCYQASEKALSLGEMELAKCKKEIDSLKSQC DDLKKQLDSLRSASEPSKDEVNRLKELKKIISAEEKEMDRLTQGSKQLKEKASELQNKIE NAGGEQLKNQKAKVTKIQSDIDKKSTEINRRKVQIETGQKMIKKLTKGIEESNKEKENLL AEKEKLLSIFKEVEQKAFTVQEDYKKIQELIDQHKGILIDAKNEYENLKKTMDEMRSSEV DAEYKLQDMKKVYKDLELKGKGYKKKLDDLHTALSKHIEQIQKDLVDPEKLQATLSDVTL GQTCDLKTALETVSLLESQLKEMNPNLDSISEYRKKVSVYNERVQELNSVTLERDDIKKQ YDEWRKRRLDEFMEGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKK SWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD AQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVSQKAA*

Transcript Sequence

Transcript ID	Solyc02g087980.3.1
Transcript Infomation	Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC)
Sequence	TTTTTAATTTTAAAAAATAGTAGTAGTAGTTCAAATCTTCTCTCACGCTCCTCTTCTACC CCAGCACTTCGCCGGACTCCTTTTCTACTCCAGCACTTCGCTGGAGTTGACCTTCAGTAG CAAGTCTTTCGGTTCTTCTTTTCAGTACAGCCTAAAGCTATTCTCCGGGAGTAAAAATGG CCGTAGATAAGGAATTCTCGAACTCCCACGAATCCAATAATGAGTCATCTCATCCTGGAT CTAGACCTCCGAGGCTATTCATTAAAGAGATGGTGATGAGAAACTTCAAATCTTATGCCG GCGAACAGCGCGTTGGCCCATTCCACAAGAGTTTTTCTGCAGTTGTTGGTCCTAATGGTA GTGGAAAGAGTAATGTCATCGACGCAATGCTCTTCGTCTTCGGAAAGCGGGCCAAACAGA TGCGTCTAAACAAAGTGTCAGAGCTCATCCACAATTCAAGTAACCATCAGAATTTGGAAA GTGCTGGCGTGTCTGTTCATTTTCAGGAAATTATAGATTTGGATGATGAGACATATGAGG CTGTTCGTGGAAGTGATTTTGTAATCACACGTGTGGCATTTCGAGATAATTCCTCTAAGT ACTATATCAATGACCGGACAAGTAACTTTACAGAGGTCACTAAGATGTTGAAAGGGAAAG GGATTGATCTAGATAACAACCGATTTCTGATTCTTCAGGGTGAGGTTGAACAAATATCAC TGATGAAGCCTAGAGGACAAGGACCACATGATGAAGGCTTTCTTGAGTATTTAGAGGATA TTATCGGAACCGACAAATATGTTGAGAAGATTGATGAATCATTCAAGCAGCTAGAAGTCC TCAATGAAAGAAGGTCTGGTGTTGTTCAAATGGTTAAGTTAGCTGAGAAAGAAAGAGATA ACTTGGAGGGAGTGAAGAATGACGCAGAAGCCTACATGCTTAAAGAATTATCACTTCTCA AATGGCAAGAGAAAGCAACAAAATTGGCTTTTGAAGATAATTCAACTCGATTTACAGAGA TGCAGGCGAACATTTCTAGACAAGAAGAGATTCTTAAAAGTGAAAGGGAGAAAATTAAGG AAAATAGCAAGTCATTGAAGGACCTTGAGTCAAAACATTCGAAGTTTCTGAAAAGACAAG AGGAGCTTGATAACGATCTGAGGCGCTGCAAGGATGAGTTCAAGGAATTTGAGAGGCAAG ATGTAAAGTATCGAGAAGATTTGAATCACTTGAAGCAGAAGATAAAGAAACTGACTGATA AAATTGATAAGGATTCTCGTAAAATTTCTGACACAACTAATGAGTGTGAGGAGTCTGCAA ATCTTATTCCAAAATTGGAGAAAGATATTCCAGGCTTGCAACAACTTTTGGTGGATGAGG AGAAAATTTTAGATGAAATAAAGGAGAATTCTAAAGTTGAAACCGAGGCTTTCCGCAGTG AGCTTTCTGCTGTTCGGTCTGAATTAGAGCCTTGGGAAAAGCACTTAATTGAGCACAAGG GAAAGCTTGAAGTGGCATCAACTGAAAGTAAACTTTTGAGTGAAAAGCATGAGGCTGGTC GTGCTGCCTATATTGAAGCACAAGAGCAGATTGTGGAAATACAGAAACGAGTAGAGATAA AATCGGCAAGCTCAAAAAACATCGCCAATGAGCTTGAGAAGAACAAGGTTAAAGCACTTG AGGCTCGAGCTGTTGAAAAGGAATGCCTTCAAGAACAAGAAAGATTGATACCTCTTGAAC AAGCGGCCAGACAAAAGCTTACTGAGCTTTCATCTGTTATGGAATCTGAAAAGAGCCAGG GATCTGTCCTAAAAGCAATAATGCATGCTAAGGAGGCAAATGTGATAGATGGCATATATG GTCGAATGGGTGACTTGGGTGCGATTGATGCAAAGTATGATGTTGCCATATCAACCGCAT GTTCTGGGCTTGATTATATTGTTGTAGAAACTACAGCAGCAGCACAAGCATGCGTGGAGC TTCTTCGAAGCAAAACCCTCGGCGTAGCAACTTTCATGATTTTGGAAAAACAAGCTCATT ATTTGCCTAAAATCAGAGAGAAAGTCAGAACGCCAGAAGGAGTCCCACGCCTTTTTGATT TGGTGAAAGTTCGAGATGAGAGGATGAAACTAGCATTTTTTGCTGCATTAGGAAATACAG TTGTTGCAGAAGATATTGATCAGGCATCACGTATTGCCTACGGTGGGGACAGAGAGTTTC GCCGTGTTGTAACACTTGAAGGTGCTCTTTTTGAAAAATCTGGAACAATGAGTGGTGGAG GGGGTAAACCTCGTGGTGGTAAAATGGGCACATCTATCCGTGCTGCTAGCGTTTCACCAG AGGCTATATCTGCTGCTGAAAATGAACTTTCACAGATCGCCGGAAACTTGGATAATGTAC GCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCTCTTG GCGAGATGGAATTAGCCAAATGCAAAAAAGAGATTGATAGCCTGAAGTCCCAATGCGATG ATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTA ATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTA CACAGGGTTCAAAACAGCTGAAAGAGAAGGCTTCAGAACTTCAAAATAAAATAGAGAATG CAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGATATTG ATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGA TTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTG AGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAG AGGACTATAAAAAGATACAGGAGCTCATTGATCAGCACAAAGGTATTCTGATTGATGCTA AAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTAGATG CTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAG GATACAAGAAAAAACTCGATGATTTGCATACTGCTTTGTCGAAGCATATTGAGCAAATTC AAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGATGTTACTCTTGGTC AAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAG AGATGAACCCAAATCTTGACTCGATTTCTGAGTATCGGAAAAAAGTATCTGTGTACAATG AAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATG ATGAGTGGAGAAAGAGAAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGA AACTTAAAGAAATGTATCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGG ATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCT GGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGACCCTCAGCTCATTGGCTCTTGTTT TTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTT TAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCAC AGTTCATAATCATAAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTA TCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTT CTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGT GCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTT GGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGAT AAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACAC ATTGGGGACAGTCAAAATTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCA CGATTTCAATTTTACTTGAAGATTATAGGCACTTATACGAAACTTGGATTTGAGTTGGTG GTTGTGAGAGTACGCTTTACTGTAGTTCCGGTGATCCCACTCTTAGTAACTGGTTCAGAT ACAACTGACAGGATTAGAACGGTATTTGTAAACGTATTTAAATAATTTAAGTTCTACAAT ATAGTAATAACTGTTGTTGAAGACTATGGACAGTGGTTTGCGTGTTCCAACACACTTCAT ATCAATTAATTTTCAGTTGATGTCGCTGCCATGGTAACAACAGTCAGAACAGTAATAATT ATTTTAGAATATTTGTCGAAAAAGATATTATATATGTGACTTGTAACTTTCTTATTCAGT TTTGAGGTAAGAGCAGACAAACCTCCATGTCTAGGCTCCACATGTTTTCTCATATAAGTT AGTGCCTAGTGGGACGTATGCTTAGATTTACCTCCATAAAAAAAAATGGAGCGGACTCGT GTAAATCGCCTTGCGCCTGACGGAAACGGCCCCAACCTTAACTGATTGCCTCTTCAAAAG TCAATTCTCATTTCTATCTTATTATGTTGACATTTATTAAAGTTTTCAGTGTACCTAATC TTATCATAGAGAACTTTCCTAGCAGTTTTCATTATGATTCTTTCAACCTTCCTGTCAATA ACCAAGATTCTAGCAAAAGGATTTATAATTCAATTAATAACACCTTTCGTATGTGGAGCT TCTTAATAAGATCAACGAGTCACTTCTTAGTGGAGGGACATGCTGCATGCAGCCTTTTTT TATGATTTCAACAAAAACAATCGCAAAAGTTCAATGAATCCTTAATTTCAATAAGACAGA GATTATTCAGGCTAAGATTTGGAAATCTCAGATGTGCATTTGCTTCTCGGCGTGACATGA TTCAAACAGTAGCGTCATGACTCATGGTTGTATTATAATATTGACCAAGTAAAATTTCTT AATTTGTAAATACTATAAACTTATGGTTTGTAATAATGCACAGTTTAAGTATGCTCACCA ACTGCGTTATGAGCCACGTTTTGTCCTCCTGCTGAGAAAGTTGAAAACCCCTCAACTAAA AACTATCAATATAATGACCAACTAACAACTATTGTACGTATATCTAGTCAACGGAAGCAA GCTCCTTCAATTGGATAACTTCCCTGCACCCATTTCCAGCCCCAAATTAAGAAAATAATT AAGTAGAAAATCATATATCCGTCCCAATTTATGTGATTTGAGAAAAAGTTTAGTAAAAGA AAAATTAAACTTTTGAAACCCATAATCTAAAACAAGTCATAGATAATTATTATTAA