Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087730.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *** A0A061EFG6_THECC)
Sequence

ATGGATGAGACTTCATCGCCACCGGCAACTGGAAATAGCTCCACCAGCCTAACAGACGTC
GACATGGACGCGTTAGTTCACTGTGCAAGTTACCTGAATCTTCAAGACGTATCGAACATG
GCCATGTCCAGTAAATATCTTCAAAAAGCCGCGTATTCAGACCCAGTCTGGGAATCCCTT
TTCAGACAGCAGTGGTCTCCACTAGTACCTTCTGGCTTATCACACACATCAACTGAGAGG
GAATTATACCTTTCCAGGCGTACTGATGTGCTGCAATTCAAGTTCATTGACCCTGAAGTT
GTAAACTTTCCTATCAGGGCAAAGCCTCATGAAAATCTGTGTCTTGACAAAGACAATATC
ATATTTTCTGAGGGATCTTCACTTTGTGTAATGAACATTGACGATTTTCGGCATGGAGAA
GATTCATATGACACACTCAGGGGTCACACTGCCAAAATTACTTCTCTGAGATCAATTCCA
TTTGAAGAGACATGCTTGTATAGTAGCAAGGGGCAGAAAAGTGATAATCTTTTTGTAACC
TCAAGCTTGGACCATTCAATTCGGCTATGGTGGAAGGGGAGTTGTCAAAGAAGCTTCAGA
ATCTGTAATGTTTCAGTTTCCGCAATTTCAGACAAATTGTTGGGTGATCATCCGAGTAAA
ATACTTGCAAGCGGTGGTTCAGATGGAATTGTTCGATTATGGTCCCTTGATTGTAGTGGA
AAGCGCAGCCAAGATGATTTAAAGGCTGTTCTATACGGGCATGATAAACCTGCAGTGCTG
ATGTCAGTTGCTGGGCACAAGACATCTCTTCTAGTGAGCATATCAAGGAACTCCAAGGTG
ATAGTTTGGGACACTGCTACTTCATCTGCCAATCGTTCTTCATGCTGTGTGGGAAAGAGC
ACTGTGCCTGGTGCACCTAAAGCAATGAAGTGTCATGAATCACTGATCTATATTGCAGCT
GGTACCTCTGTTGTTGCAATTGATATAAGAACAATGCGTCAAGTTTTCAAAGTGAACCAT
CAAGAAGAAGTACATTCATTTCAAATGTTGCCAGAGAAATCATTGATGTGCACAGGGTTA
GCTCAAAGAGCAATGCTTTGGGATGTGAGAAGAGGGTGTGACATACACAAGGGAGAAGCA
GTAGCTGAATTAGATGGACATAGAGGCAATGTAAGCCTCTTGCACATGGATCCCTACAAG
ATTGTTAGTGGTGGGCTGAAGGATTTCCAGGTACATGTTTGGGAGACGGGGAACGGTAGA
CAATTAACTTCATTGAATTGCTGCTCTCTATCTGATTCTCGTCAAGGCTATCGGTGTTCT
GCAATGGCTGTCAATGGAAGTCGTATACTAACAGCTTGTAATGACGGACACTTCAGTGAC
TTGTGTTTCCGGGACTTTAACAACGCCACGATTCCTTCTCTCTCTTCCGATTCAAGCATT
CTCCAATCAAAGTTCTGGGCTCCTAAATCACAAAGTGATACTGAAGAATAA

Peptide Sequence

PEP ID

Solyc02g087730.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *** A0A061EFG6_THECC)
Sequence

MDETSSPPATGNSSTSLTDVDMDALVHCASYLNLQDVSNMAMSSKYLQKAAYSDPVWESL
FRQQWSPLVPSGLSHTSTERELYLSRRTDVLQFKFIDPEVVNFPIRAKPHENLCLDKDNI
IFSEGSSLCVMNIDDFRHGEDSYDTLRGHTAKITSLRSIPFEETCLYSSKGQKSDNLFVT
SSLDHSIRLWWKGSCQRSFRICNVSVSAISDKLLGDHPSKILASGGSDGIVRLWSLDCSG
KRSQDDLKAVLYGHDKPAVLMSVAGHKTSLLVSISRNSKVIVWDTATSSANRSSCCVGKS
TVPGAPKAMKCHESLIYIAAGTSVVAIDIRTMRQVFKVNHQEEVHSFQMLPEKSLMCTGL
AQRAMLWDVRRGCDIHKGEAVAELDGHRGNVSLLHMDPYKIVSGGLKDFQVHVWETGNGR
QLTSLNCCSLSDSRQGYRCSAMAVNGSRILTACNDGHFSDLCFRDFNNATIPSLSSDSSI
LQSKFWAPKSQSDTEE*

Transcript Sequence

Transcript ID

Solyc02g087730.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** A0A061EFG6_THECC)
Sequence

TTTTTTTGATGATACTCTGTGAGATAAAAAGGCCTGGCATAGATCATAGCTGAGGGGTTT
TATTTAGGTTAAAATTCAAAGAAAAGTTAACATGTATATGTCTTCCTTGTAGAGTTTAGT
AGGGGAAGAGGGAAATTTTCGAGAATCGAAAGATGGATGAGACTTCATCGCCACCGGCAA
CTGGAAATAGCTCCACCAGCCTAACAGACGTCGACATGGACGCGTTAGTTCACTGTGCAA
GTTACCTGAATCTTCAAGACGTATCGAACATGGCCATGTCCAGTAAATATCTTCAAAAAG
CCGCGTATTCAGACCCAGTCTGGGAATCCCTTTTCAGACAGCAGTGGTCTCCACTAGTAC
CTTCTGGCTTATCACACACATCAACTGAGAGGGAATTATACCTTTCCAGGCGTACTGATG
TGCTGCAATTCAAGTTCATTGACCCTGAAGTTGTAAACTTTCCTATCAGGGCAAAGCCTC
ATGAAAATCTGTGTCTTGACAAAGACAATATCATATTTTCTGAGGGATCTTCACTTTGTG
TAATGAACATTGACGATTTTCGGCATGGAGAAGATTCATATGACACACTCAGGGGTCACA
CTGCCAAAATTACTTCTCTGAGATCAATTCCATTTGAAGAGACATGCTTGTATAGTAGCA
AGGGGCAGAAAAGTGATAATCTTTTTGTAACCTCAAGCTTGGACCATTCAATTCGGCTAT
GGTGGAAGGGGAGTTGTCAAAGAAGCTTCAGAATCTGTAATGTTTCAGTTTCCGCAATTT
CAGACAAATTGTTGGGTGATCATCCGAGTAAAATACTTGCAAGCGGTGGTTCAGATGGAA
TTGTTCGATTATGGTCCCTTGATTGTAGTGGAAAGCGCAGCCAAGATGATTTAAAGGCTG
TTCTATACGGGCATGATAAACCTGCAGTGCTGATGTCAGTTGCTGGGCACAAGACATCTC
TTCTAGTGAGCATATCAAGGAACTCCAAGGTGATAGTTTGGGACACTGCTACTTCATCTG
CCAATCGTTCTTCATGCTGTGTGGGAAAGAGCACTGTGCCTGGTGCACCTAAAGCAATGA
AGTGTCATGAATCACTGATCTATATTGCAGCTGGTACCTCTGTTGTTGCAATTGATATAA
GAACAATGCGTCAAGTTTTCAAAGTGAACCATCAAGAAGAAGTACATTCATTTCAAATGT
TGCCAGAGAAATCATTGATGTGCACAGGGTTAGCTCAAAGAGCAATGCTTTGGGATGTGA
GAAGAGGGTGTGACATACACAAGGGAGAAGCAGTAGCTGAATTAGATGGACATAGAGGCA
ATGTAAGCCTCTTGCACATGGATCCCTACAAGATTGTTAGTGGTGGGCTGAAGGATTTCC
AGGTACATGTTTGGGAGACGGGGAACGGTAGACAATTAACTTCATTGAATTGCTGCTCTC
TATCTGATTCTCGTCAAGGCTATCGGTGTTCTGCAATGGCTGTCAATGGAAGTCGTATAC
TAACAGCTTGTAATGACGGACACTTCAGTGACTTGTGTTTCCGGGACTTTAACAACGCCA
CGATTCCTTCTCTCTCTTCCGATTCAAGCATTCTCCAATCAAAGTTCTGGGCTCCTAAAT
CACAAAGTGATACTGAAGAATAATCAGATCATGATTCAACCTAGCTGCTCCCTGACTCTA
AAATCGGTTACTTTTTTGTTTCTTCCTTAATTTTTGAATTTCATTGAGTTAGACTTACGT
CTCATGTCTTCGTGATAACAAGTAAATTATGTTTGCGCCCCTTTAAATGTTTGATTTTAC
GAACGTCAAATTATTTCGGATCAGATTTTTCTTTTCAATGTTTTTGAGCTAATTTATGAG
TTTTTATGAAAGGAGCCTAACAATAATATGAAATTTTAAAACTACATTTCGTCCTTATCT
GCATTGCTG