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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087670.3.1
CDS Infomation

Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC)
Sequence

ATGGGAGGAACAAAGCTGGTATATTTGTCTCTGTTACTATTTTCCACATTTTTGGTAATA
AATGGTCACATTGGTGAGTTTGATGAGGTGTGGAGGAGGAGAGCCCAGGAAGCAGATGAA
TGGGCCATAAAGGCTTACAAGCCCGACCCCATCAATGTCACCCTTGCATTTGCTAAGGAA
ACTGGACAGGCCTTAAAGGAAATAAAGGAAGCGAAGCTGGCAGTAAATGGAACAAGGAGG
GAATTAAAAGGAGGCGGCAAAAAATACGATGGGCCTTGCTCAGTTACCAACCCAATTGAT
AGGTGCTGGAGATGCCAACCTGATTGGGCCGACAATCGCAAAAGGTTAGCTGATTGTGCA
ATGGGCTTTGCAAAAGGGACTACCGGAGGAAAAGCCGGCGAAATCTACGTCGTCACGGAT
TCTTCCGACGACACTAGCGACCCTAAGCCGGGAACCCTCCGATATGGTGTCATTCAAAAG
GAGCCATTATGGATCATATTTGCTAAAAGTATGACCATTAGGCTACACCAGGAACTCATA
GTGCAAAGTGATAAGACCATTGACGGCCGTGGAGTTAATGTTCACATTGCTAATGGAGCA
GGTTTCATGCTCCAGTACGTGAAGAACGTGATCATCCACGGTCTCCGCATTCATGATATT
GTGGTGGGCAGTGGTGGGATGATCAGAGATGCAATGGACCACGTTGGACAACGGACACAG
AGTGACGGAGATGGTATTTCTATATTTGGTTCATCGAATATATGGGTGGATCATGTCTCC
ATGTGGAGTTGTTATGATGGGCTTGTTGATGCTATTGAGGGATCCACTGCTGTTACCATA
TCGAATAGTCATTTCACTGATCATAATGAGGTGATGCTTTTTGGTGCGAGTGACAGTTCT
TCAATTGATCAAAGGATGCAAATTACCGTGGCTTATAATCATTTTGGGAAGAGATTGATA
CAGAGAATGCCAAGGTGCAGATGGGGTTTTATTCATGTGGTTAACAATGACTACACACAT
TGGAATATGTATGCTATTGGCGGTAGCCAACATCCCACTATTATTAGTCAAGGTAATCGT
TTCATTGCTCCTCCTGACATGTTCAAGAAAGAGGTAACAAAGAGGGACTATTCCCCAGAA
TCAGTGTGGAAACAATGGTCATGGAGATCACAAGGTGATCTATTCATGAATGGAGCATTC
TTTGTTGAATCTGGAGATCCAGATTGGACCCAGAAACACATACAGCTTTTTGATGGGGTT
GTATCAGCCTCAGGGGATCAAGTCACTTGGATTACAAGATTTTCAGGGGCACTAAATTGC
AAGCCAGGAGAAGCTTGTTAG

Peptide Sequence

PEP ID

Solyc02g087670.3.1
PEP Infomation

Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC)
Sequence

MGGTKLVYLSLLLFSTFLVINGHIGEFDEVWRRRAQEADEWAIKAYKPDPINVTLAFAKE
TGQALKEIKEAKLAVNGTRRELKGGGKKYDGPCSVTNPIDRCWRCQPDWADNRKRLADCA
MGFAKGTTGGKAGEIYVVTDSSDDTSDPKPGTLRYGVIQKEPLWIIFAKSMTIRLHQELI
VQSDKTIDGRGVNVHIANGAGFMLQYVKNVIIHGLRIHDIVVGSGGMIRDAMDHVGQRTQ
SDGDGISIFGSSNIWVDHVSMWSCYDGLVDAIEGSTAVTISNSHFTDHNEVMLFGASDSS
SIDQRMQITVAYNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTIISQGNR
FIAPPDMFKKEVTKRDYSPESVWKQWSWRSQGDLFMNGAFFVESGDPDWTQKHIQLFDGV
VSASGDQVTWITRFSGALNCKPGEAC*

Transcript Sequence

Transcript ID

Solyc02g087670.3.1
Transcript Infomation

Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC)
Sequence

ATGGGAGGAACAAAGCTGGTATATTTGTCTCTGTTACTATTTTCCACATTTTTGGTAATA
AATGGTCACATTGGTGAGTTTGATGAGGTGTGGAGGAGGAGAGCCCAGGAAGCAGATGAA
TGGGCCATAAAGGCTTACAAGCCCGACCCCATCAATGTCACCCTTGCATTTGCTAAGGAA
ACTGGACAGGCCTTAAAGGAAATAAAGGAAGCGAAGCTGGCAGTAAATGGAACAAGGAGG
GAATTAAAAGGAGGCGGCAAAAAATACGATGGGCCTTGCTCAGTTACCAACCCAATTGAT
AGGTGCTGGAGATGCCAACCTGATTGGGCCGACAATCGCAAAAGGTTAGCTGATTGTGCA
ATGGGCTTTGCAAAAGGGACTACCGGAGGAAAAGCCGGCGAAATCTACGTCGTCACGGAT
TCTTCCGACGACACTAGCGACCCTAAGCCGGGAACCCTCCGATATGGTGTCATTCAAAAG
GAGCCATTATGGATCATATTTGCTAAAAGTATGACCATTAGGCTACACCAGGAACTCATA
GTGCAAAGTGATAAGACCATTGACGGCCGTGGAGTTAATGTTCACATTGCTAATGGAGCA
GGTTTCATGCTCCAGTACGTGAAGAACGTGATCATCCACGGTCTCCGCATTCATGATATT
GTGGTGGGCAGTGGTGGGATGATCAGAGATGCAATGGACCACGTTGGACAACGGACACAG
AGTGACGGAGATGGTATTTCTATATTTGGTTCATCGAATATATGGGTGGATCATGTCTCC
ATGTGGAGTTGTTATGATGGGCTTGTTGATGCTATTGAGGGATCCACTGCTGTTACCATA
TCGAATAGTCATTTCACTGATCATAATGAGGTGATGCTTTTTGGTGCGAGTGACAGTTCT
TCAATTGATCAAAGGATGCAAATTACCGTGGCTTATAATCATTTTGGGAAGAGATTGATA
CAGAGAATGCCAAGGTGCAGATGGGGTTTTATTCATGTGGTTAACAATGACTACACACAT
TGGAATATGTATGCTATTGGCGGTAGCCAACATCCCACTATTATTAGTCAAGGTAATCGT
TTCATTGCTCCTCCTGACATGTTCAAGAAAGAGGTAACAAAGAGGGACTATTCCCCAGAA
TCAGTGTGGAAACAATGGTCATGGAGATCACAAGGTGATCTATTCATGAATGGAGCATTC
TTTGTTGAATCTGGAGATCCAGATTGGACCCAGAAACACATACAGCTTTTTGATGGGGTT
GTATCAGCCTCAGGGGATCAAGTCACTTGGATTACAAGATTTTCAGGGGCACTAAATTGC
AAGCCAGGAGAAGCTTGTTAGACCATCATTGTTCTATAAATGTTATCACCAAACCAAACT
CTCTCATCAGTCCTTAAACTAACTTTGTATGCATTTATTGTATCGAAATTCTCTGTAATT
TTGAACTGTTAAATGACGAAATTGAAAAGATGCAAATTCACACCAAG