Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087580.3.1
CDS Infomation

Actin cross-linking (AHRD V3.3 *** A0A103Y4S4_CYNCS)
Sequence

ATGGAGTTCTTCAACAGAGCTAAAGTTGTTCGGCTCAAAGGTCATCTTGGCAAATACCTT
GTCGCCGATGATGACGAAAGAACTGTCCGTCAAAGCCGTAATGGGTCATCAAAAAAGGCA
GGTTGGATGGTGGAAATGGTTCAAGGCAATCCTCACCTCATTCGTCTCCGGAGTTGCAAT
GACAAATATTTATCGGCATCTGAGGACGCTTTCCTCCTTGGCATGACGGGTAAGAGAGTA
CTCCAAGCATTACCAGGTAGCACGGCGGATGGTTTAATTGAATGGGAGCCAATAAAGGAA
GGATATCAAGTGAAATTAAGGACAAGAGGAGGAAAATTCTTGAGGGCTAATGGAGCAACA
CCTCCATGGAGAAATTCTGTAACTCATGATTTACCTCATAGGACTGCTACACAAGATTGG
GTATTATGGGATGTGGATGTGATTGATATATCTGTACTGGATTCTGAATCCTTACAGAGT
TATCCTTCAACTCTATCGACCTTTTCTTCTTTTGCGGAGGATGATTTTAACGATTATTCT
AACATTCGTCGCTCTGTTTCTGAAATTCCCAGCTGTCCATCAATTTCATCAGATCGGTCT
TCATGTTCAAGTTCCAGACAGAATGGCATGGAATTCTTCGACAGAGCTGAAGCAGTTAGA
CTTCAGAGCCATCTCGGAAAGTACCTACTGGCGGATGAAGACGAACAAACTGTTCGACAG
AGCAGAAACGGATCATCGCACAGGGCGCGATGGACAGTTGAATTAGTTGCCGGAAAAAAC
AATTTAATTAGACTGAAAAGCTGCTATGGGCTGTACCTAACAGCAACTGAACAACCATTT
CTTTTGGGAATGACTGGTAAAAAAGTTGTTCAAGCTCTTTCAACAAAGAATATGGATGGG
TCAATTGAATGGGAACCAATAAAAGAAGGATTTCATGTGAAGCTTAGAACAAATGAAGGG
AAATATTTGAGGGCTAATGGAGCAACACCACCATGGAGAAATTCTATAACACATGATGTT
CCTAACAGGACAGCTACTCAAGATTGGGTTATGTGGGGAGTAGAAGTTGTGGACATTACT
ATTTCAGATACTAATGAATCAGTATCGACGAGTTTATCGCCAGCGTCAAGTTTCAATTCC
GTGCTCGATCATTACACAACTTCTCCTACTGGATCCCCAAATGTCGTAAACTACCGATCC
AAGAGGTCTATGAACACAAAGAATTCTGGGATGGAATTCTTCCAGAAAGCTAAATCGGTT
AGGCTAAAAAGCCGACATGACAAATTCTTATTAGCAGATCCTGATCAAGAAACGGTGTAC
CAAGATCGCAATGGAACTTCCCAGGGTGCAAAATGGACAATTGAATTCCCTGAAGAAGTC
GAAAATGTTATCAGGTTGAAGAGTTGTTATGGAAAATATCTAACAGCCACAGATGATCAA
TTCCTTTTTGGTGTTACGGGTTGTAAAGTTGTTCAGAGTTTGCCTAAAAAGTTAGATTCC
TTAATTGAGTGGGAACCAATGAAGGATGGATTCTTAGTGAAGCTTAAAACCAGATATGGG
AATTATTTACGCGCAAATGGTGGATTACCCCCTTGGCGAAATTCAATTACACATGATATA
CCTCATAGACATCACGATTGGATCTTATGGCAAGTGGATATTGTTGAAATATTGCCAGAA
TCAGAAATTATTCCTCAATCACGATTGGACGATAATTCCAGCTCTTCTTTTCATTTTACA
TCCCCTACATATCATGAGAGTGAGTCAAGAGATGCATTTGATGCTTCCACGGTGAAGTCT
GAAGGTCGGTTGATCTATTACCATGTGGCTGATGAAAATGGATATGCAAATGATGCAGTG
GAAGGGCCATCTTTTCAATTCAAAGGGCACAGTGTAGGGGAACTGACTCAAAAGTTGGAG
GAAATAACAGGGATGGATGATATTACTGTCTGTTCACGAAATAAATTCAATGGGAATCTA
TATCCACTCCGTTTAGCATTGCCTCCAAACAACGCGGATATGAATGTTGTGGTAGTTCCT
GCATCAGCCAAAAGTAAGTAG

Peptide Sequence

PEP ID

Solyc02g087580.3.1
PEP Infomation

Actin cross-linking (AHRD V3.3 *** A0A103Y4S4_CYNCS)
Sequence

MEFFNRAKVVRLKGHLGKYLVADDDERTVRQSRNGSSKKAGWMVEMVQGNPHLIRLRSCN
DKYLSASEDAFLLGMTGKRVLQALPGSTADGLIEWEPIKEGYQVKLRTRGGKFLRANGAT
PPWRNSVTHDLPHRTATQDWVLWDVDVIDISVLDSESLQSYPSTLSTFSSFAEDDFNDYS
NIRRSVSEIPSCPSISSDRSSCSSSRQNGMEFFDRAEAVRLQSHLGKYLLADEDEQTVRQ
SRNGSSHRARWTVELVAGKNNLIRLKSCYGLYLTATEQPFLLGMTGKKVVQALSTKNMDG
SIEWEPIKEGFHVKLRTNEGKYLRANGATPPWRNSITHDVPNRTATQDWVMWGVEVVDIT
ISDTNESVSTSLSPASSFNSVLDHYTTSPTGSPNVVNYRSKRSMNTKNSGMEFFQKAKSV
RLKSRHDKFLLADPDQETVYQDRNGTSQGAKWTIEFPEEVENVIRLKSCYGKYLTATDDQ
FLFGVTGCKVVQSLPKKLDSLIEWEPMKDGFLVKLKTRYGNYLRANGGLPPWRNSITHDI
PHRHHDWILWQVDIVEILPESEIIPQSRLDDNSSSSFHFTSPTYHESESRDAFDASTVKS
EGRLIYYHVADENGYANDAVEGPSFQFKGHSVGELTQKLEEITGMDDITVCSRNKFNGNL
YPLRLALPPNNADMNVVVVPASAKSK*

Transcript Sequence

Transcript ID

Solyc02g087580.3.1
Transcript Infomation

Actin cross-linking (AHRD V3.3 *** A0A103Y4S4_CYNCS)
Sequence

TATATATGCCAAAATATGTTCAACATAATAAGATTTAAGATAAATTTGATAGAACAGTAA
CAAATTAGAATAAGACAAATAAATTAAAAAACGAAAGAATAGTATTGGAAAGCAGAGTCC
TTTAAATAACTGACCATAAGAAGCAGGGAGTACCAAACAAATAATTGCTTTACAAAAATT
AAGAGATAATGGAGTTCTTCAACAGAGCTAAAGTTGTTCGGCTCAAAGGTCATCTTGGCA
AATACCTTGTCGCCGATGATGACGAAAGAACTGTCCGTCAAAGCCGTAATGGGTCATCAA
AAAAGGCAGGTTGGATGGTGGAAATGGTTCAAGGCAATCCTCACCTCATTCGTCTCCGGA
GTTGCAATGACAAATATTTATCGGCATCTGAGGACGCTTTCCTCCTTGGCATGACGGGTA
AGAGAGTACTCCAAGCATTACCAGGTAGCACGGCGGATGGTTTAATTGAATGGGAGCCAA
TAAAGGAAGGATATCAAGTGAAATTAAGGACAAGAGGAGGAAAATTCTTGAGGGCTAATG
GAGCAACACCTCCATGGAGAAATTCTGTAACTCATGATTTACCTCATAGGACTGCTACAC
AAGATTGGGTATTATGGGATGTGGATGTGATTGATATATCTGTACTGGATTCTGAATCCT
TACAGAGTTATCCTTCAACTCTATCGACCTTTTCTTCTTTTGCGGAGGATGATTTTAACG
ATTATTCTAACATTCGTCGCTCTGTTTCTGAAATTCCCAGCTGTCCATCAATTTCATCAG
ATCGGTCTTCATGTTCAAGTTCCAGACAGAATGGCATGGAATTCTTCGACAGAGCTGAAG
CAGTTAGACTTCAGAGCCATCTCGGAAAGTACCTACTGGCGGATGAAGACGAACAAACTG
TTCGACAGAGCAGAAACGGATCATCGCACAGGGCGCGATGGACAGTTGAATTAGTTGCCG
GAAAAAACAATTTAATTAGACTGAAAAGCTGCTATGGGCTGTACCTAACAGCAACTGAAC
AACCATTTCTTTTGGGAATGACTGGTAAAAAAGTTGTTCAAGCTCTTTCAACAAAGAATA
TGGATGGGTCAATTGAATGGGAACCAATAAAAGAAGGATTTCATGTGAAGCTTAGAACAA
ATGAAGGGAAATATTTGAGGGCTAATGGAGCAACACCACCATGGAGAAATTCTATAACAC
ATGATGTTCCTAACAGGACAGCTACTCAAGATTGGGTTATGTGGGGAGTAGAAGTTGTGG
ACATTACTATTTCAGATACTAATGAATCAGTATCGACGAGTTTATCGCCAGCGTCAAGTT
TCAATTCCGTGCTCGATCATTACACAACTTCTCCTACTGGATCCCCAAATGTCGTAAACT
ACCGATCCAAGAGGTCTATGAACACAAAGAATTCTGGGATGGAATTCTTCCAGAAAGCTA
AATCGGTTAGGCTAAAAAGCCGACATGACAAATTCTTATTAGCAGATCCTGATCAAGAAA
CGGTGTACCAAGATCGCAATGGAACTTCCCAGGGTGCAAAATGGACAATTGAATTCCCTG
AAGAAGTCGAAAATGTTATCAGGTTGAAGAGTTGTTATGGAAAATATCTAACAGCCACAG
ATGATCAATTCCTTTTTGGTGTTACGGGTTGTAAAGTTGTTCAGAGTTTGCCTAAAAAGT
TAGATTCCTTAATTGAGTGGGAACCAATGAAGGATGGATTCTTAGTGAAGCTTAAAACCA
GATATGGGAATTATTTACGCGCAAATGGTGGATTACCCCCTTGGCGAAATTCAATTACAC
ATGATATACCTCATAGACATCACGATTGGATCTTATGGCAAGTGGATATTGTTGAAATAT
TGCCAGAATCAGAAATTATTCCTCAATCACGATTGGACGATAATTCCAGCTCTTCTTTTC
ATTTTACATCCCCTACATATCATGAGAGTGAGTCAAGAGATGCATTTGATGCTTCCACGG
TGAAGTCTGAAGGTCGGTTGATCTATTACCATGTGGCTGATGAAAATGGATATGCAAATG
ATGCAGTGGAAGGGCCATCTTTTCAATTCAAAGGGCACAGTGTAGGGGAACTGACTCAAA
AGTTGGAGGAAATAACAGGGATGGATGATATTACTGTCTGTTCACGAAATAAATTCAATG
GGAATCTATATCCACTCCGTTTAGCATTGCCTCCAAACAACGCGGATATGAATGTTGTGG
TAGTTCCTGCATCAGCCAAAAGTAAGTAGAATTCTCCATCTCCGTGTGAAAGAAGTTGCA
ACACTTCTAGATGCATGCCACATGCTATTGGTTAAGTTTTGCATCTGTAATTACTGCAGA
TTTTGTTCAAGATAATGAAATTTTAATGAGTTTAGACTAGAAGCATGGGCGATTTTGGAT
GTATACACCAAATCGATGAAATTCATACCAGAACCATAATCTTTATATTTGGTTTCCTAT
TAAGTATGTCATTCTAACTGATGAACCACCGTGACTCCTTGCAATCAAGTGTTTTCTTCT
GTCTCTATTAGCCAGTGTTTTATGGCTAATTGACAGTACCCATAAAACTTGATATACTCA
ACTTCTTTTGTTTAAAGCTGAAGAAAGGGAAATTTTAGGAAAAACTCATAAACGACAAAA
CATTCATTACAACATTCACAATAAAGGAAAAACCAAAATGAAAAATTGCTTTCATTTACT
TTCTCAATAGATATGAAACTAAATTCTCATACAACAACAAATTCTTAAAAGAAAAGGCTC
CTGGCTTCTGTAAGAAAATTTCCAAGAGAAGAATGTGTGGATATCAATCTAGTATACACC
GTATTCCTAAAGTAAAATACATGTGATTGCGATCATCACACCAGATATAAATGCCTAATA
TTCATTGCATGACTAGTAAGAATATTGTCAACAGGAGCACAAGTCTCGAATGTTGATGAT
CCACCATTGTATAGAAAGAATGGATCTTTCAGCAACTCTTCTGCAGACGGCCTAACAGAC
ATGGGAAGTATACACTTCTCAATAATATCTCTCACTCTGTAGTCCTTCACATTTCCAAGA
GACACTGGCTTTACACCAGTGTACACTTTCTTAAATGTATGCATCTGATTCCTGCATTCC
ATATATGGATATTCACCGGTAACCATCTCAAGAAGACACATCCCGAATGAATATGCATCA
ACCAACTCATTGTATTCTCCATTATAGCACTCTGGAGCCATGAATTCAGGGGTACATTTA
GGCTCTTTTTCTTTCACAAAATCACCATCCATAATACAAACAGCCAGCCCAAATTGCTTC
CCATCACTAGCAACGAACACATTGTCACATTTGATGTCTCGATGAATAATCTTAGGGCTC
TGGCTATGGAGAAAACACAAACCTTGCAGAATCTGTCTTCCCCAATTCTTGATACTCACC
AAATCAACACCAACACCATTATGAATATACTTTTTTAAGCTGCCCGAGGAGAATAACTCC
GTGATCATGTTCAAAATTTTGGACTCTGAATCAACCCAATAATGGTAACACTTAATAATT
CTTTCATGGTTTAAGGACTTCAACAGAGAAGGAAAATTTCTCTACAACTCTGTAGAACTC
GTCATCCATTGTGCAAACACGAACAATAACTCAAATTCAAATTTGAAGAAATTAAAAAAA
TATGAGGTGATCAAACTAATGCTAAGGGTTACCAATAGTAGTCCTAGTTAGGAAAAAACT
AAAAACTTATTTGATCTGGATTGTGTAAATGAAGAGATTAGGACTTAGAAAAGTTCCTAA