Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g087260.1.1
CDS Infomation	plant viral-response family protein (DUF716) (AHRD V3.3 *** AT3G01360.2)
Sequence	ATGGGGCTATTCAGCTATACTGTCGCCGGCGGCGGATTTATACTAATCGGCGCTTGGGAA TCTCTGGTCTCTTCTTCTGGTGCCCTGAAAAATTCATCACCGTCGTCCACTACCCAATCG CCGCCACAAAATCCATCGACAGATAAGCATGAGCAAGATTCTGTTTTTTCTTCATCGGTC ACCTTTGTATTAATCTTAATCCTTTCGTTCCTTTTCGTTCTCGATTCCTTGTTATCCTTT TTCGACGCACTCAACTCCAAAGACAACATTGGTTCCGTCCTTCAATTGCAGGTTATCGCG ATTTCTCTTCTTTTCTTTCTCTATTCGGTATTAGGTCTCATGACCCGCTTGAAAAGTTCT TTTCATTTACCTTCACCGATCCTCAATTTGCTTTGCCTCTTCGCTTTTGCTGAGGAATTT TTGTTGTTTTATCTTCAAAGGAAAGACCCAAGTGGAGTTGAAAATCGTTACTATAATCTC TTGCTTGTGCCTATTGCTATTTGTGCATTTTGTTCATTTCTAGAATTGAAAAATCCCAAA TCAAATTACACTAGATTAGGACGTGGGATTGGGTTAATCTTGCAAGGGACGTGGACTCTT CAAATGGGGTTTGCTTTTTTCTCCGATTTGATTGCACAGGGATGCTATTTACATCAAAGG AGTAGAGGTAATTACACGGTTAAGTGTAAAGGTCATCCTCAGTACCATCGAGGTGGAGCT ATTGCTACCCTTCAGTTCAATTGCCACCTTGCTCTTCTTGTGACTGTGATTACTTTTGTA TACTCAATTGTGTGTAAAAAACATGGCATTGGCCGTGAACATATGCGGTATAGACCTATT GGAGCTGAGATGCAACACTTGGAAATCGATAGTCAAGCTCATTTTACATTGGAGTCTGAT GAAGAGGATGACAATGAGAATGGGATAAAAGAAGAGATGAATGTTGAAATGCAAAAGGCT ATTGTACCTGTTCCTGAATCAGAAACTAATGGCTATCATACCCATCCTTGA

Peptide Sequence

PEP ID	Solyc02g087260.1.1
PEP Infomation	plant viral-response family protein (DUF716) (AHRD V3.3 *** AT3G01360.2)
Sequence	MGLFSYTVAGGGFILIGAWESLVSSSGALKNSSPSSTTQSPPQNPSTDKHEQDSVFSSSV TFVLILILSFLFVLDSLLSFFDALNSKDNIGSVLQLQVIAISLLFFLYSVLGLMTRLKSS FHLPSPILNLLCLFAFAEEFLLFYLQRKDPSGVENRYYNLLLVPIAICAFCSFLELKNPK SNYTRLGRGIGLILQGTWTLQMGFAFFSDLIAQGCYLHQRSRGNYTVKCKGHPQYHRGGA IATLQFNCHLALLVTVITFVYSIVCKKHGIGREHMRYRPIGAEMQHLEIDSQAHFTLESD EEDDNENGIKEEMNVEMQKAIVPVPESETNGYHTHP*

Transcript Sequence

Transcript ID	Solyc02g087260.1.1
Transcript Infomation	plant viral-response family protein (DUF716) (AHRD V3.3 *** AT3G01360.2)
Sequence	ATGGGGCTATTCAGCTATACTGTCGCCGGCGGCGGATTTATACTAATCGGCGCTTGGGAA TCTCTGGTCTCTTCTTCTGGTGCCCTGAAAAATTCATCACCGTCGTCCACTACCCAATCG CCGCCACAAAATCCATCGACAGATAAGCATGAGCAAGATTCTGTTTTTTCTTCATCGGTC ACCTTTGTATTAATCTTAATCCTTTCGTTCCTTTTCGTTCTCGATTCCTTGTTATCCTTT TTCGACGCACTCAACTCCAAAGACAACATTGGTTCCGTCCTTCAATTGCAGGTTATCGCG ATTTCTCTTCTTTTCTTTCTCTATTCGGTATTAGGTCTCATGACCCGCTTGAAAAGTTCT TTTCATTTACCTTCACCGATCCTCAATTTGCTTTGCCTCTTCGCTTTTGCTGAGGAATTT TTGTTGTTTTATCTTCAAAGGAAAGACCCAAGTGGAGTTGAAAATCGTTACTATAATCTC TTGCTTGTGCCTATTGCTATTTGTGCATTTTGTTCATTTCTAGAATTGAAAAATCCCAAA TCAAATTACACTAGATTAGGACGTGGGATTGGGTTAATCTTGCAAGGGACGTGGACTCTT CAAATGGGGTTTGCTTTTTTCTCCGATTTGATTGCACAGGGATGCTATTTACATCAAAGG AGTAGAGGTAATTACACGGTTAAGTGTAAAGGTCATCCTCAGTACCATCGAGGTGGAGCT ATTGCTACCCTTCAGTTCAATTGCCACCTTGCTCTTCTTGTGACTGTGATTACTTTTGTA TACTCAATTGTGTGTAAAAAACATGGCATTGGCCGTGAACATATGCGGTATAGACCTATT GGAGCTGAGATGCAACACTTGGAAATCGATAGTCAAGCTCATTTTACATTGGAGTCTGAT GAAGAGGATGACAATGAGAATGGGATAAAAGAAGAGATGAATGTTGAAATGCAAAAGGCT ATTGTACCTGTTCCTGAATCAGAAACTAATGGCTATCATACCCATCCTTGA