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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087200.1.1
CDS Infomation

U-box domain-containing protein 40 (AHRD V3.3 *** PUB40_ARATH)
Sequence

ATGGGTACTAGCAAGCAAAGATGGAGAATTTCATTTCACAAGTCTCCATCAAAACAACCT
CCTATTCCTATAGAATTTGTCTGTCCTATTTCTGGTTCTCTCATGGCTGACCCTGTAATC
GTTTCTTCAGGCCATACTTTTGAGCGTCATTGTGTTCATGCCTGCAAATCACTTTCTTTT
ACCCCTGTTCTTCCTGATGGCTCTGTTCCTGATTTCTCTACTGTGATCCCTAACTTAGCT
CTCAAGTCTACAATCCTCAATTTTTGCCGTTCTTCTTTTCTTGACCCACCAAAACCCATC
AATTTTCTCACAGCTGAAAATCTCGTTTTCACATTGAAGGCCACCCGAAAACCCCAAGAT
GCTACAAGATTTAATGGCGTCCGGGTTATGCAGACGGAAACTGAACTGAACCGGGTACCG
AGTCACATATCAATGAGTTCAGAGGAATCTGTGACTCCTAGAAGTGGACCCACTTATTAC
TCTTCGTCGTCAGCCTCTGACTTTGAAACCCTAAACCCAAATTCCTTTGAAGAAGATGAA
CTACTTGTGAAATTGAAGAGTTCCCAAATATCTGAACAAGAAGAAGCTGTCATCTCGTTT
CGAAAATTGACCCGAACCCGTGAAGAAACCCGGTTCCAGTTATGCACTCCGCGTATACTT
TCAGCTCTACGTGTACTCATCACTTCAAGGTATGTTTCTGTACAAGTAAATTCAGTAGCG
GCATTGGTAAATTTGTCGTTAGAGAATCGAAACAAGGTGAAAATTTTACGGTCTGGAATT
GTTCCGTCTTTGATTGACGTGTTGAAAAGTGGATTCCAAGAATCACAGGAACATGTTGCT
GGTGCACTTTTCAGTTTAGCGTTAGATGATCAGAACAAAACTGCAATTGGGGTATTAGGA
GCTCTGCCTCCACTTCTTCATGCCCTTCGATCTGAATCGGAACGAACTAGGCATGATTCG
GCTCTGGCTCTATATCACCTCACTTTAGTTCAGAGTAACAGGGCTAAATTGGTGAAACTC
GGGGCGGTTCAGGCATTACTAGGCATGGTTAAAACGGGTCATATGATGGGTCGGATTCTG
TTGATACTTTGTAACCTGGCTGCGAGCTCTGAAGGGAGAGCAGCAATGCTTGATGGGGGT
GCAGTGGAGTGTTTTGTATGTATGTTGAGAAAGGGAGAGTTTGAATCGGAGTCGACTCGT
GAGAATTGTCTTGCTGCATTATATGGACTTAGTCATGGTGGCCTTAGGTTTAAAGGGTTG
GCAAAAGAGGCTGCTGCGGAGGAGCTGTTGATACAAGTTGAGGAAATGGGAAGTGAAAGG
GCCAAGGATAAAGTTAGAAAGATATTGGAGGTTTTGAGGCAGAAGGATGAAGAGGAGGAA
GTTGATTGGGAGAAGTTGCTTAATTCGGATGATGATATCAGTCAAGCACGGATAAGTTCT
TCATAG

Peptide Sequence

PEP ID

Solyc02g087200.1.1
PEP Infomation

U-box domain-containing protein 40 (AHRD V3.3 *** PUB40_ARATH)
Sequence

MGTSKQRWRISFHKSPSKQPPIPIEFVCPISGSLMADPVIVSSGHTFERHCVHACKSLSF
TPVLPDGSVPDFSTVIPNLALKSTILNFCRSSFLDPPKPINFLTAENLVFTLKATRKPQD
ATRFNGVRVMQTETELNRVPSHISMSSEESVTPRSGPTYYSSSSASDFETLNPNSFEEDE
LLVKLKSSQISEQEEAVISFRKLTRTREETRFQLCTPRILSALRVLITSRYVSVQVNSVA
ALVNLSLENRNKVKILRSGIVPSLIDVLKSGFQESQEHVAGALFSLALDDQNKTAIGVLG
ALPPLLHALRSESERTRHDSALALYHLTLVQSNRAKLVKLGAVQALLGMVKTGHMMGRIL
LILCNLAASSEGRAAMLDGGAVECFVCMLRKGEFESESTRENCLAALYGLSHGGLRFKGL
AKEAAAEELLIQVEEMGSERAKDKVRKILEVLRQKDEEEEVDWEKLLNSDDDISQARISS
S*

Transcript Sequence

Transcript ID

Solyc02g087200.1.1
Transcript Infomation

U-box domain-containing protein 40 (AHRD V3.3 *** PUB40_ARATH)
Sequence

ATGGGTACTAGCAAGCAAAGATGGAGAATTTCATTTCACAAGTCTCCATCAAAACAACCT
CCTATTCCTATAGAATTTGTCTGTCCTATTTCTGGTTCTCTCATGGCTGACCCTGTAATC
GTTTCTTCAGGCCATACTTTTGAGCGTCATTGTGTTCATGCCTGCAAATCACTTTCTTTT
ACCCCTGTTCTTCCTGATGGCTCTGTTCCTGATTTCTCTACTGTGATCCCTAACTTAGCT
CTCAAGTCTACAATCCTCAATTTTTGCCGTTCTTCTTTTCTTGACCCACCAAAACCCATC
AATTTTCTCACAGCTGAAAATCTCGTTTTCACATTGAAGGCCACCCGAAAACCCCAAGAT
GCTACAAGATTTAATGGCGTCCGGGTTATGCAGACGGAAACTGAACTGAACCGGGTACCG
AGTCACATATCAATGAGTTCAGAGGAATCTGTGACTCCTAGAAGTGGACCCACTTATTAC
TCTTCGTCGTCAGCCTCTGACTTTGAAACCCTAAACCCAAATTCCTTTGAAGAAGATGAA
CTACTTGTGAAATTGAAGAGTTCCCAAATATCTGAACAAGAAGAAGCTGTCATCTCGTTT
CGAAAATTGACCCGAACCCGTGAAGAAACCCGGTTCCAGTTATGCACTCCGCGTATACTT
TCAGCTCTACGTGTACTCATCACTTCAAGGTATGTTTCTGTACAAGTAAATTCAGTAGCG
GCATTGGTAAATTTGTCGTTAGAGAATCGAAACAAGGTGAAAATTTTACGGTCTGGAATT
GTTCCGTCTTTGATTGACGTGTTGAAAAGTGGATTCCAAGAATCACAGGAACATGTTGCT
GGTGCACTTTTCAGTTTAGCGTTAGATGATCAGAACAAAACTGCAATTGGGGTATTAGGA
GCTCTGCCTCCACTTCTTCATGCCCTTCGATCTGAATCGGAACGAACTAGGCATGATTCG
GCTCTGGCTCTATATCACCTCACTTTAGTTCAGAGTAACAGGGCTAAATTGGTGAAACTC
GGGGCGGTTCAGGCATTACTAGGCATGGTTAAAACGGGTCATATGATGGGTCGGATTCTG
TTGATACTTTGTAACCTGGCTGCGAGCTCTGAAGGGAGAGCAGCAATGCTTGATGGGGGT
GCAGTGGAGTGTTTTGTATGTATGTTGAGAAAGGGAGAGTTTGAATCGGAGTCGACTCGT
GAGAATTGTCTTGCTGCATTATATGGACTTAGTCATGGTGGCCTTAGGTTTAAAGGGTTG
GCAAAAGAGGCTGCTGCGGAGGAGCTGTTGATACAAGTTGAGGAAATGGGAAGTGAAAGG
GCCAAGGATAAAGTTAGAAAGATATTGGAGGTTTTGAGGCAGAAGGATGAAGAGGAGGAA
GTTGATTGGGAGAAGTTGCTTAATTCGGATGATGATATCAGTCAAGCACGGATAAGTTCT
TCATAG