Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087110.3.1
CDS Infomation

Alpha-dioxygenase (AHRD V3.3 *** Q5GQ66_PEA)
Sequence

ATGTCTTTTGTTAATCTTTTTCTATTTCCTCTTCGTTGTTTCATTCACAAAGATTTTCAT
GATGTTGTTGATAGAATGAGTCTTCTCAACAAACTTTTGTTTATGATGGTTCACTTGATT
GATAAATTGAACCTGTGGCACCGGCTACCAGTGTTCTTGGGGCTACTTTATCTCGCAGCA
CGGCGACATCTTCATCAGCAATATAATTTGATCAACGTCGATAGAACATTTACTATCGAT
GTTACATCAAATCGGGTCGTCGAAAAATACAACGACCCCTTTAATGAAGGATGTGGCAGT
GAATTACCTTTCTTTGGTAGGAATATGATGCCTGTTGTTCAACATGAAAAGTTAAAGAAT
CCAGATCCAATGGTAGTGGCAACAAAATTGCTAGCACGCAGAAAATTCATCGATACTGGA
AAACAATTCAACATGATAGCTGCCTCTTGGATACAATTTATGATTCATGATTGGATCGAT
CATTTGGAAGATACTCAACAGATTGAGCTAAGGGCACCTGAAGAAGTTGCAAGTGAGTGT
CCTCTCAAGTCCTTGAAGTTTTTCAAGACCAAGCAAACACCTACGGGTTTATGTGATATC
AAGACGGGTCACTTGAACATACGTACTCCACAGTGGGATGGAAGTGCTATTTATGGGAGC
AGATCTGAAGTTTCAAAGAAAGTGAGGACATTTAAAGACGGAAAATTGAAACTATCAGAA
AATGGGCTCCTTGAACAAGATGAAAATGGAAAAATTATATCTGGTGATGTTCGCAATGCT
TGGGCTGGACTTGTAACTCTGCAAGCGCTCTTTGTACAAGAGCATAATCTTGTTTGTGAC
ACCTTGAAGAAAGAATATCCAGAATTGAAAGATGAGGAGTTGTATCGTCATGCAAAACGT
GTCACTGCTGCTGTAATTGCTAAAATTCACACCATAGATTGGACAGTTGAACTTCTCAAT
ACAGACACCCTTCTAGCAGGAATGCGCGCCAATTGGTATGGATTGTTAGGAAAGAAATTC
AAGGATACATTTGGTCATGTTGGAGGTTCCATTTTAAGTGGTTTTGTGGGAATGAAGAAA
CCTGAGGATCATGGAGTGCCTTATTCCTTAACTGAGGAATTTACGAGTGTCTATCGAATG
CATCAACTCCTGCCTGATACACTTGAGCTAAGAAATATCGATGCCACGCCTGGACTAAAC
AAATCTCTTCCTTTGACTAATGAGATCCTGATGGAAGATCTAATTGGGGGTAAAGGAAAT
GAGAATCTATCAAGAATTGGGTTTACTAAGCAAATGGTTTCAATGGGACATCAAGCTAGT
GGAGCTCTTGAACTTTGGAATTATCCGATATGGATGAGGGATCTTATTGCCCAAGACGTC
GATGGAACAGACAGGCCAGATCCTATTGACCTTGCAGCTCTTGAAATTTATAGAGACAGA
GAAAGGAGTGTTGCTAGGTACAATGAATTTCGAAGGAGAATGTTGCAAATTCCCATCACT
AAATGGGAAGATTTGAGTGATGATATGGAAGTTATTAAAACACTTAATGAAGTATATGGT
GATGATGTAGAACAATTGGATCTGTTAGTTGGAATGTCCGCGGAGAAAAAAATTAAGGGG
TTTGCTATCTCTGAGACTGCTTTTTTCATATTTCTAATCATGGCATCAAGAAGGTTAGAG
GCAGATAAATTTTTCACGAGCTATTACAATGAGGAGACATATACGAAAAAAGGACTTGAA
TGGGTGAATACAACTGAAAGCTTAAAAGATGTACTAGATCGACATTATCCAGAGATGACT
GAGAAATGGATGAACTCCAACAGCGCCTTTTCTGTTTGGAACTCGCCTCCAGAACCACAC
AATCCAATTCCAGTCTACTTTCGCGTTCCTCGGACATAG

Peptide Sequence

PEP ID

Solyc02g087110.3.1
PEP Infomation

Alpha-dioxygenase (AHRD V3.3 *** Q5GQ66_PEA)
Sequence

MSFVNLFLFPLRCFIHKDFHDVVDRMSLLNKLLFMMVHLIDKLNLWHRLPVFLGLLYLAA
RRHLHQQYNLINVDRTFTIDVTSNRVVEKYNDPFNEGCGSELPFFGRNMMPVVQHEKLKN
PDPMVVATKLLARRKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTQQIELRAPEEVASEC
PLKSLKFFKTKQTPTGLCDIKTGHLNIRTPQWDGSAIYGSRSEVSKKVRTFKDGKLKLSE
NGLLEQDENGKIISGDVRNAWAGLVTLQALFVQEHNLVCDTLKKEYPELKDEELYRHAKR
VTAAVIAKIHTIDWTVELLNTDTLLAGMRANWYGLLGKKFKDTFGHVGGSILSGFVGMKK
PEDHGVPYSLTEEFTSVYRMHQLLPDTLELRNIDATPGLNKSLPLTNEILMEDLIGGKGN
ENLSRIGFTKQMVSMGHQASGALELWNYPIWMRDLIAQDVDGTDRPDPIDLAALEIYRDR
ERSVARYNEFRRRMLQIPITKWEDLSDDMEVIKTLNEVYGDDVEQLDLLVGMSAEKKIKG
FAISETAFFIFLIMASRRLEADKFFTSYYNEETYTKKGLEWVNTTESLKDVLDRHYPEMT
EKWMNSNSAFSVWNSPPEPHNPIPVYFRVPRT*

Transcript Sequence

Transcript ID

Solyc02g087110.3.1
Transcript Infomation

Alpha-dioxygenase (AHRD V3.3 *** Q5GQ66_PEA)
Sequence

ATTATTTTTGTAGGATACTCGTGCCTCTCTACTCCATCTCTATATATAGAAGGATGTGTT
CCTCCAAAATCAAGCATTTAGAACCAACCCCATATATATTTCTAGCTTGTAGAAAATTAA
ACTAACAACATGTCTTTTGTTAATCTTTTTCTATTTCCTCTTCGTTGTTTCATTCACAAA
GATTTTCATGATGTTGTTGATAGAATGAGTCTTCTCAACAAACTTTTGTTTATGATGGTT
CACTTGATTGATAAATTGAACCTGTGGCACCGGCTACCAGTGTTCTTGGGGCTACTTTAT
CTCGCAGCACGGCGACATCTTCATCAGCAATATAATTTGATCAACGTCGATAGAACATTT
ACTATCGATGTTACATCAAATCGGGTCGTCGAAAAATACAACGACCCCTTTAATGAAGGA
TGTGGCAGTGAATTACCTTTCTTTGGTAGGAATATGATGCCTGTTGTTCAACATGAAAAG
TTAAAGAATCCAGATCCAATGGTAGTGGCAACAAAATTGCTAGCACGCAGAAAATTCATC
GATACTGGAAAACAATTCAACATGATAGCTGCCTCTTGGATACAATTTATGATTCATGAT
TGGATCGATCATTTGGAAGATACTCAACAGATTGAGCTAAGGGCACCTGAAGAAGTTGCA
AGTGAGTGTCCTCTCAAGTCCTTGAAGTTTTTCAAGACCAAGCAAACACCTACGGGTTTA
TGTGATATCAAGACGGGTCACTTGAACATACGTACTCCACAGTGGGATGGAAGTGCTATT
TATGGGAGCAGATCTGAAGTTTCAAAGAAAGTGAGGACATTTAAAGACGGAAAATTGAAA
CTATCAGAAAATGGGCTCCTTGAACAAGATGAAAATGGAAAAATTATATCTGGTGATGTT
CGCAATGCTTGGGCTGGACTTGTAACTCTGCAAGCGCTCTTTGTACAAGAGCATAATCTT
GTTTGTGACACCTTGAAGAAAGAATATCCAGAATTGAAAGATGAGGAGTTGTATCGTCAT
GCAAAACGTGTCACTGCTGCTGTAATTGCTAAAATTCACACCATAGATTGGACAGTTGAA
CTTCTCAATACAGACACCCTTCTAGCAGGAATGCGCGCCAATTGGTATGGATTGTTAGGA
AAGAAATTCAAGGATACATTTGGTCATGTTGGAGGTTCCATTTTAAGTGGTTTTGTGGGA
ATGAAGAAACCTGAGGATCATGGAGTGCCTTATTCCTTAACTGAGGAATTTACGAGTGTC
TATCGAATGCATCAACTCCTGCCTGATACACTTGAGCTAAGAAATATCGATGCCACGCCT
GGACTAAACAAATCTCTTCCTTTGACTAATGAGATCCTGATGGAAGATCTAATTGGGGGT
AAAGGAAATGAGAATCTATCAAGAATTGGGTTTACTAAGCAAATGGTTTCAATGGGACAT
CAAGCTAGTGGAGCTCTTGAACTTTGGAATTATCCGATATGGATGAGGGATCTTATTGCC
CAAGACGTCGATGGAACAGACAGGCCAGATCCTATTGACCTTGCAGCTCTTGAAATTTAT
AGAGACAGAGAAAGGAGTGTTGCTAGGTACAATGAATTTCGAAGGAGAATGTTGCAAATT
CCCATCACTAAATGGGAAGATTTGAGTGATGATATGGAAGTTATTAAAACACTTAATGAA
GTATATGGTGATGATGTAGAACAATTGGATCTGTTAGTTGGAATGTCCGCGGAGAAAAAA
ATTAAGGGGTTTGCTATCTCTGAGACTGCTTTTTTCATATTTCTAATCATGGCATCAAGA
AGGTTAGAGGCAGATAAATTTTTCACGAGCTATTACAATGAGGAGACATATACGAAAAAA
GGACTTGAATGGGTGAATACAACTGAAAGCTTAAAAGATGTACTAGATCGACATTATCCA
GAGATGACTGAGAAATGGATGAACTCCAACAGCGCCTTTTCTGTTTGGAACTCGCCTCCA
GAACCACACAATCCAATTCCAGTCTACTTTCGCGTTCCTCGGACATAGGCTCAAAATCAA
AATAAAAAGAAGTAATACGTGTGTTGATTAGTTTTTACCTGCAAATGTGTAATAAGATTC
CATGTACTATCCTCACTACCTGTTTCATTCAGTGAGCCGTTTTATGAAACTATTTCAGAG
TGTATTATATGATATTTTTGTCCAATAAAAGAAGAGAAACATGTGGTTTTGTTGCATATT
TT