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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g087040.1.1
CDS Infomation

Ring finger protein, putative (AHRD V3.3 *** B9RUC1_RICCO)
Sequence

ATGATTTGTTCATTTGGTGAAGTTGAGTCACAAAGATGGGTTTCTGGGCATACCCATCTG
AAAAGTTCTTGGATTCAATATAGAAAAGATGGTGTTTTTACATATCCTCCTCCTCTGTTT
CCCCCATCTCCTCCTCCATTTGGTGGAAGTTCTAGTTTTCATAAGGAACCAAACTCATCT
TCTTCATCCCCATCTGGAAACAAGATTAGTCCAGCTGTTCTTTTCATTATAGTTATATTA
GCTGTCCTGTTTTTCATATCTGGTCTGCTTCATTTGCTAGTTAGGTTTCTTATCAAACAC
CCTTCTTCTTCAGCATCATCTCAATCTAATGGATATCCTGAAGTTTCTAGTTCAGATGCT
TTGCAAAGACAGTTACAACAGTTATTCCATTTACATGATTCTGGTTTGGATCAAGCATTT
ATTGATGCATTACCTGTCTTTTTGTACAAAGAGGTTGTTGGTCCTAAAGAGCCCTTTGAT
TGTGCTGTTTGCTTGTGTGAATTCTCTGATAAGGACAAATTGAGATTGCTCCCTACTTGT
AGCCATGCTTTCCATATCAACTGCATTGATACTTGGCTCCTCTCTAACTCAACGTGCCCT
CTTTGTCGAGCAACTCTTTTCAATCCCGGGTTTCCCATTGAAAATCCAATTTTCGATTAC
GTTGAACCGAGAGATGATGATGGTTATCATGGTAATGGGGATCACGAGTTCCCCACTTCT
CAAAAGACTATGGAACTAGAGGAAGTTGTGGTTGCTAAAGCAACATTTCCTGTGAGACTT
GGTAAGTTTCGAAGATTGAATGATGGGGAAGAGGAAGTAGAAGGAGTGGGAGAGAGCAGT
AGCAGTAATTTGGATGCAAGAAGGTGCTTTTCAATGGGTTCATATCAGTATGTGGTTGGT
GATGCTAATCTTAAGGTAGCCTTGGACAATGAGCGGAAGACGAATAATATGAATCAAGCC
AATTTGGCAGAGCATGGTCCTAATCCGTCAATTGATGAAGAGATTGAGGGGAAAAAGATA
GGTATCGGCACAAAAACAGATAGTTATTCTGTTTCCAAAATTTGGCTTTGGTCGAAAAGA
GGCAAATTCGCAAGTTCTTCAGATTGCCAAATGGAAGATCAGCCTCCTTCTGGTATGGAC
TTTCCATGGCTTAGAAGAACAGAAGGCATGTAG

Peptide Sequence

PEP ID

Solyc02g087040.1.1
PEP Infomation

Ring finger protein, putative (AHRD V3.3 *** B9RUC1_RICCO)
Sequence

MICSFGEVESQRWVSGHTHLKSSWIQYRKDGVFTYPPPLFPPSPPPFGGSSSFHKEPNSS
SSSPSGNKISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNGYPEVSSSDA
LQRQLQQLFHLHDSGLDQAFIDALPVFLYKEVVGPKEPFDCAVCLCEFSDKDKLRLLPTC
SHAFHINCIDTWLLSNSTCPLCRATLFNPGFPIENPIFDYVEPRDDDGYHGNGDHEFPTS
QKTMELEEVVVAKATFPVRLGKFRRLNDGEEEVEGVGESSSSNLDARRCFSMGSYQYVVG
DANLKVALDNERKTNNMNQANLAEHGPNPSIDEEIEGKKIGIGTKTDSYSVSKIWLWSKR
GKFASSSDCQMEDQPPSGMDFPWLRRTEGM*

Transcript Sequence

Transcript ID

Solyc02g087040.1.1
Transcript Infomation

Ring finger protein, putative (AHRD V3.3 *** B9RUC1_RICCO)
Sequence

ATGATTTGTTCATTTGGTGAAGTTGAGTCACAAAGATGGGTTTCTGGGCATACCCATCTG
AAAAGTTCTTGGATTCAATATAGAAAAGATGGTGTTTTTACATATCCTCCTCCTCTGTTT
CCCCCATCTCCTCCTCCATTTGGTGGAAGTTCTAGTTTTCATAAGGAACCAAACTCATCT
TCTTCATCCCCATCTGGAAACAAGATTAGTCCAGCTGTTCTTTTCATTATAGTTATATTA
GCTGTCCTGTTTTTCATATCTGGTCTGCTTCATTTGCTAGTTAGGTTTCTTATCAAACAC
CCTTCTTCTTCAGCATCATCTCAATCTAATGGATATCCTGAAGTTTCTAGTTCAGATGCT
TTGCAAAGACAGTTACAACAGTTATTCCATTTACATGATTCTGGTTTGGATCAAGCATTT
ATTGATGCATTACCTGTCTTTTTGTACAAAGAGGTTGTTGGTCCTAAAGAGCCCTTTGAT
TGTGCTGTTTGCTTGTGTGAATTCTCTGATAAGGACAAATTGAGATTGCTCCCTACTTGT
AGCCATGCTTTCCATATCAACTGCATTGATACTTGGCTCCTCTCTAACTCAACGTGCCCT
CTTTGTCGAGCAACTCTTTTCAATCCCGGGTTTCCCATTGAAAATCCAATTTTCGATTAC
GTTGAACCGAGAGATGATGATGGTTATCATGGTAATGGGGATCACGAGTTCCCCACTTCT
CAAAAGACTATGGAACTAGAGGAAGTTGTGGTTGCTAAAGCAACATTTCCTGTGAGACTT
GGTAAGTTTCGAAGATTGAATGATGGGGAAGAGGAAGTAGAAGGAGTGGGAGAGAGCAGT
AGCAGTAATTTGGATGCAAGAAGGTGCTTTTCAATGGGTTCATATCAGTATGTGGTTGGT
GATGCTAATCTTAAGGTAGCCTTGGACAATGAGCGGAAGACGAATAATATGAATCAAGCC
AATTTGGCAGAGCATGGTCCTAATCCGTCAATTGATGAAGAGATTGAGGGGAAAAAGATA
GGTATCGGCACAAAAACAGATAGTTATTCTGTTTCCAAAATTTGGCTTTGGTCGAAAAGA
GGCAAATTCGCAAGTTCTTCAGATTGCCAAATGGAAGATCAGCCTCCTTCTGGTATGGAC
TTTCCATGGCTTAGAAGAACAGAAGGCATGTAG