Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g086870.3.1
CDS Infomation

farnesyl protein transferase subunit B
Sequence

ATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGTTACCT
TCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGATGCCTCATCTTGCA
ACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCA
ATTAATAGAGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTC
AGGATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCTGTTGCA
AATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAGT
TGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGGGTAT
ACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTGCCA
GGTTTAATTGATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACA
AATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGGCGCGGTAGTGTTTCTTATACAA
AGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGT
GCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCC
TCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTGCTTGTCAAGAAAATGCTTCT
CATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGG
CCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGATTGAAGTT
GGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTA
AGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCC
AGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAAC
GTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGA

Peptide Sequence

PEP ID

Solyc02g086870.3.1
PEP Infomation

farnesyl protein transferase subunit B
Sequence

MIYITAGFFLHIEQEFLVLPSSQDKDGGYGGGPGQMPHLATTYAAVNSLITLGKPEALSS
INREKLYTFLLRMKDASGGFRMHDGGEVDVRACYTAISVANILNIVDDELIHGVGNYILS
CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEVNRLDLPGLIDWVVFRQGVEGGFQGRT
NKLVDGCYSFWQGAVVFLIQRLNLIVHEQLGLSNDLSTESADDSSESELSDEEEHLEGIS
SHVQDTFPLGQAGACQENASHSPKIADTGYEFINRPIAMRPLFDSMYLQQYVLLCSQIEV
GGFRDKPGKGRDYYHTCYCLSGLSIAQYSWTDEADSPPLPRDVFGPYSKCLLEQVHPLFN
VVLDRYYEAREYFSGL*

Transcript Sequence

Transcript ID

Solyc02g086870.3.1
Transcript Infomation

farnesyl protein transferase subunit B
Sequence

ACTAATTCTCCAGATGTCGCAGAAAGAGTAAACGAGCGTTGATTTGTCGCTGACGAAATT
TACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGA
CGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACA
GCATTTCCCCCAACTCTCCGTCCGACCTCATAGAGATCGAACGTGACAAACACTTCGGTT
ATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAGTCGAC
CATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCA
AACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAGGACCATACTGTGCTACAAG
AGCATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGTTA
CCTTCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGATGCCTCATCTT
GCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCA
TCAATTAATAGAGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGA
TTCAGGATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCTGTT
GCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTA
AGTTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGGG
TATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTG
CCAGGTTTAATTGATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGG
ACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGGCGCGGTAGTGTTTCTTATA
CAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAA
AGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATA
TCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTGCTTGTCAAGAAAATGCT
TCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATG
AGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGATTGAA
GTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGT
TTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTA
CCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTC
AACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGT
TTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAA
GTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATAC
GTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTC
GTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAG
TGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCAT