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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g086860.3.1
CDS Infomation

CASP-like protein (AHRD V3.3 *** K4BBJ3_SOLLC)
Sequence

ATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCAT
CTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCC
TCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGAT
AAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGG
TCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAG
ATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCG
CCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAG
TCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAA
CCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTG
AAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGC
AACCGTCGGCAGAGAGGAAAGCCACAGTTGTCGATTTTAAGAAAAGTGAGGAGGGATGCA
ATGGTAAAGAAAGCGGGTTTAGGTTTTAGGATTTTTGGGTTTTTGTCTTGTTTGGTTTCA
TTTTCTGTTATGGCAGCTGATAGGAATAAGGGTTGGGCTCTGGATTCTTTTGAACGTTAC
AAGGAGTTCAGGTACTGTATGTCAGTGAATGTCATTGGATTTGTGTATTCAGCAGCTCAG
GCATTCGATTTAGCCTACCAATCTGCCACCGGCAAGAACATCGTGCAACATCATTTGCGC
TACATGTTTGATTTTGCCCTAGATCAGGCAACCAAGCTGGTTACATGGTCCATATGGAGC
TTCATTTTCTTGGTGACTAGACCAGAAACTGTGGTAACATATCTTCTGATATCAGCATCA
TCTTCTGCTGCCACTCGCATTGATGATTGGCAGTCCAATTGGGGCAAGGACAAATTTCCT
GATATGGCAAGCGCCTCTGTAGCATTGTCCTTCCTTTCATTTGCGGCTTTGGCCTTCAGC
TCACTCATATCTGGCTATGTACTATGCAATTCCAGATCAACGTAG

Peptide Sequence

PEP ID

Solyc02g086860.3.1
PEP Infomation

CASP-like protein (AHRD V3.3 *** K4BBJ3_SOLLC)
Sequence

MELNHTKQTLQTAMENEQQHLSLSESDSTDSEPEKAITFSSPARFHSGSDSDHSTKFQTD
KATNPSTVNGDSTKAQSQPRSSISSDSDDFSKCGEHKVSKIDSTTATVNRDSTATKVSSP
PVESPPRSSISSDQISLPHESLNMEDTKPSAAPTGSPPEKPPIPEAVVKKFIKEEPLALV
KADLFVGDGTASIKEGEDSGNRRQRGKPQLSILRKVRRDAMVKKAGLGFRIFGFLSCLVS
FSVMAADRNKGWALDSFERYKEFRYCMSVNVIGFVYSAAQAFDLAYQSATGKNIVQHHLR
YMFDFALDQATKLVTWSIWSFIFLVTRPETVVTYLLISASSSAATRIDDWQSNWGKDKFP
DMASASVALSFLSFAALAFSSLISGYVLCNSRST*

Transcript Sequence

Transcript ID

Solyc02g086860.3.1
Transcript Infomation

CASP-like protein (AHRD V3.3 *** K4BBJ3_SOLLC)
Sequence

ATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCAT
CTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCC
TCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGAT
AAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGG
TCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAG
ATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCG
CCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAG
TCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAA
CCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTG
AAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGC
AACCGTCGGCAGAGAGGAAAGCCACAGTTGTCGATTTTAAGAAAAGTGAGGAGGGATGCA
ATGGTAAAGAAAGCGGGTTTAGGTTTTAGGATTTTTGGGTTTTTGTCTTGTTTGGTTTCA
TTTTCTGTTATGGCAGCTGATAGGAATAAGGGTTGGGCTCTGGATTCTTTTGAACGTTAC
AAGGAGTTCAGGTACTGTATGTCAGTGAATGTCATTGGATTTGTGTATTCAGCAGCTCAG
GCATTCGATTTAGCCTACCAATCTGCCACCGGCAAGAACATCGTGCAACATCATTTGCGC
TACATGTTTGATTTTGCCCTAGATCAGGCAACCAAGCTGGTTACATGGTCCATATGGAGC
TTCATTTTCTTGGTGACTAGACCAGAAACTGTGGTAACATATCTTCTGATATCAGCATCA
TCTTCTGCTGCCACTCGCATTGATGATTGGCAGTCCAATTGGGGCAAGGACAAATTTCCT
GATATGGCAAGCGCCTCTGTAGCATTGTCCTTCCTTTCATTTGCGGCTTTGGCCTTCAGC
TCACTCATATCTGGCTATGTACTATGCAATTCCAGATCAACGTAG