Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g086830.3.1
CDS Infomation

Protease Do-like 1 (AHRD V3.3 *** W9SPU6_9ROSA)
Sequence

ATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGG
AAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCT
GGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGT
GACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTT
GCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACT
TCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACA
CCTTCCGTTGTGTATATTACTAATCTTGCTTCCAGGCAGGATATGTTCACACTGGATGTA
TTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTT
ACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAGAGTGACTCTTGCTGATCAAACT
ACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATT
GATGCACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTT
GGTCAAAAAGTATTTGCTATTGGAAATCCATTTGGACTTGATCATACACTCACCACTGGT
GTAATCAGTGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGAT
GTTATTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGT
TCTGGAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGT
GTTGGATTTTCAATTCCAGTTGATACTGTCAGTGGCATTGTTGATCAGTTAGTGCAGTTT
GGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAA
CTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCA
GGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACA
TCTATAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAATGC
AAAGTTGGAGAAAAGGTAATTGTGGAAGTGCTGCGTGGGGATCAGAAAGAGAAGATCCCT
GTACTTCTGGAACCAAAGCCTGAAGAATCGTAG

Peptide Sequence

PEP ID

Solyc02g086830.3.1
PEP Infomation

Protease Do-like 1 (AHRD V3.3 *** W9SPU6_9ROSA)
Sequence

MAASSHSLASSACFSTTPARKFSGSDRFQLAKSLLCRKIPGFSGSVVCARRICSNYASSG
DQSNYGKKLMDSIFVACTSVALSFSLYIADVDPASAFVVTSPRKLQTDELATVRLFQENT
PSVVYITNLASRQDMFTLDVFEVPQGSGSGFVWDKNGNIVTNYHVIRGASDLRVTLADQT
TYDAKVVGFDQDKDVAVLHIDAPKDKLRPIPIGVSADLLVGQKVFAIGNPFGLDHTLTTG
VISGLRREINSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSG
VGFSIPVDTVSGIVDQLVQFGKVTRPILGIKFAPDQSVEQLGVTGVLVLDAPPNGPAGKA
GLLPTKRDSYGRLILGDIITSINGKKVSNGTDLYRILDQCKVGEKVIVEVLRGDQKEKIP
VLLEPKPEES*

Transcript Sequence

Transcript ID

Solyc02g086830.3.1
Transcript Infomation

Protease Do-like 1 (AHRD V3.3 *** W9SPU6_9ROSA)
Sequence

GAAGAACCAAGTCAATCGGGTCTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGG
CTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAAT
TTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTT
TCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACC
AGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCT
TGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCAC
CCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTT
CCGTTGTGTATATTACTAATCTTGCTTCCAGGCAGGATATGTTCACACTGGATGTATTTG
AGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTA
ATTATCATGTGATTCGAGGTGCTTCTGATCTCAGAGTGACTCTTGCTGATCAAACTACTT
ATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATTGATG
CACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTTGGTC
AAAAAGTATTTGCTATTGGAAATCCATTTGGACTTGATCATACACTCACCACTGGTGTAA
TCAGTGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGATGTTA
TTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGTTCTG
GAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGTGTTG
GATTTTCAATTCCAGTTGATACTGTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGA
AAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGG
GAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCAGGTC
TTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTA
TAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAATGCAAAG
TTGGAGAAAAGGTAATTGTGGAAGTGCTGCGTGGGGATCAGAAAGAGAAGATCCCTGTAC
TTCTGGAACCAAAGCCTGAAGAATCGTAGTTCCTCAAATGGATAGAGTATGTGTTGATAT
GCATTTCTTGGCGAACAAGCCCATATTATTAGTGCATCAATTGTTGAATGGTTGTGTATA
TACAAAACAACGCTTAAAACTAGGGTGCAAGCAATATAGTTGGGAGTCTAACACTGCTGC
CTAAATATTTCTACTATATTAGATATCCTCAAATTGTATAATGTTAGGTAAGATGGGTGT
CCACTTAACGGGATGACAGAACTACATCAATCTGGTGAAATTCCCAATCCTAAATCAGAT
GAAAAGGACGAACTAGAAAATTATTTGGCTAAAGTGTAAGCATGAACTGATTTGCCTTGC
AAGTTCCTTAAAACTTAAAGAGCTAGATGTGACAACAAAAGGATAGCAAAAGTCCAGCAT
ATTCTATTTACATTCAAGATACAAAAAGACCAAATTGATAAAGAAACATTATCAACTCTG
ACAATGAAATCTGAAAATTTTAGTCCAACACTAATATATTTACATTCAAGACATGGCAAG
AACAAATTGATAGAGAAACTTTATCTATTTTGACAATCAAAATTGAAAACTCAAGTCTAC
CATTATTCTATTAGCCTTCAAGTTGCACCAAGAACCATCCAGGGTATCAGTGGAATGGAC
AGTAGTCCTCCACCCTTAGTCGGAGGTCCTAAACCCTAAATGCAGATTAGTTGGGATCAG
GGCGCTGAACGCATTGATACAGAAAGAACAAATTGATAAAGAAATGACAACAAAGAAATC
GAGAATTTAAGTGTAACGATTATATTAACATTCAAGATACACAAAGAACGAATTGATAGA
GAGACTTTATTCTGACAATGAAAATAAAAACTTTACATTCATTTCTAGTACAAACCGTAT
ACCACAAGCAGGAAGAATCTCAATTCCTCATTGCCCAAATAAGACAATTTTATTTTCCTA
GTTTGTCTTATCCAAATGTACAAAAAGTTGATGCCCCAACATGACAACAAAGACCTTATT
CTTTCATCTTTCTAGTATATCAATCTCTTGATCCTGGAGGAAAATATGAGACATGTTACC
AAGAAGTGTTTCCAGGGATCTTGATTTCCTGCTCCTCACTCTCCCTGATTCTCTTAACAA
CTCAGTTAATCTCCTCTTCTCATCATCCACGTCAGGATTTGCTGTCCCCAGTTTCTCCTC
TCTCATTCCGACGACGAATTCTAAGATTTCAATTGCATCATCCGTCCTGCAAACAATTAC
ATTGTTATGATGAAAAAAAGAAAAAAAAAAACAGAAACCAAACATAACATGATATAGTAA
TATGACAATCGAAGACATCAATTACCTGCCCATAGCATCATAAGTTCCAGCAAGATTGCT
ATAGATTCCTAATGTATCTGCATGATATGGTCCACATTCAGTCTCTAAAATTATCCTTGC
TTCTTCAAATAGGTCCCCAGCCTCATTAATTGCATAAAGTTGTACACATGCAAGTCCCAT
TTGGTTTAAAGTAATACCAAAAATTGCAGACTTCTTCTCTCCAATTTCTCTGAATTTCGA
TACTGCAGTTTTCAGGGAATCGTACGAGTCCATATAATCCCCCAGAATATAGTACAAGAC
CCCAATCTGGGCTTCAATTCCTGCAATAGTGCTCTGTTGTCCTGGTGCATTTCCATACAC
TTTTATGGCCTTCTGAAGCAACTTGAGCGCCTGATCAGGTTCGTTCATCGACTCATAGAT
CACAGATACATCGACAAGACCACTTGCAATCTCTTCTGGATGGCTTCCAGGGACGGCCTT
AGTATAAATCCGAAGTGCATTTTCACAGTATGATTTGGACTCCCTGAATTTTCCTATCTT
GTTATACAAATCAGCCAGACGTACATAGACCGATGCAACTGAAGGATGGTTCTCTCCTTT
GGTAGACTTGAACTTAGTAAGAGCTTTTTGGTAAGCACATATAGCCTCATCATACCGTGC
CATAGATAAATATGCATCACCAATGTTGCAGTCAATGGACGCTACATCAGCTTCCTGGCC
ATTAGCTGCCATGGCCATGCCTGCTAAAACATAATGCTCAAGAGCAGCCTCGTAGTCACC
CTTCGAATCGTAGATAAGCCCCAAGAGTCTTCTGTCAGCAGCTTCTTCAGGAGAGGCTGA
TGAATTGTTCTCCTTATGAATGTCAAGTGCCATCTGACAAAGCTTCTCAGCCTCATCAAA
TTGCATAGCTTGAACATGTGCTTCAGCCACATACCTACAAGTTTCGCCAAATCTCGTGTC
TTTCTCTCCAAGAACTTGCCTTTGGATTTCCAGGCCAGCAGTATAGCACAGTATCGAATT
CTCCAACTGTCCGAGCATTGCATATGTATCACCTAACTGCATGCACCCTGCAAATTTTGC
GAGTGCATGATTTTGTCCCACATCCAAGTCAGGAATTTCAATTGATCGCTCCAACAGCGG
AATTGCCTCGTTGTACTTCCCTAATCGACAATGTAACGCTGCTACAACGTGCAAACACAT
AACAAACTCTAAACTGCTGTTACCCTTTGAAGAACTCTCAAACGATTTCATGGCTCGAAG
GGCTAGTTCAAGAGCCTTTTGAACATTTTCCCCGGTTGTTGAAATCATATCCCTGGCTTG
TTTAAGTAAATAGGGTCCTAAATATCCTGCCTTAGATGAATCCTCATTTGCATTCGGATT
CTTCTCATTCTTCATGGACATAGTTGCATTGAGCTTTTTCAAATTCCCAAATCTCTTCGG
AGAAGGCTTTTCATTAAAAGACTTGCTCCTTGATCTTGGTGGCTTGTTAGCTATTGGAGA
ATCAGTTCGCGAAGGAGAATATTTCTTTCCCTTTGCAGACCAAACAGATTTGGGACTTGC
TGGATATGTTTTAATTTTTCCCAACTTCTCATCATTGTGTACTTTATCATGCTCAGAAAG
CCCCTTTTTACTATCCAATTCACCAAAATCTCCCCCTGCAAGGTACCTTAACTCAGAGTC
AATTCTCGATTCCTCACCATACGATAGAAAGCTCCTTCTCGAAGGAGAATAGTCGGAGCT
CTGCATTTCATACACATTATTGTATAGTTGTTCAATTGAAGTATCAACACCCCCATTTAT
ATCCAGATCAATCGACTCTGTTTCGCGACTATGTGTACTCAACGGACTCCTCGGAGACCC
CTGATCGAAAATTTCTCTATGAGGTAGAAAATGGCCATTAGGTTCTTTCTGA