Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g086750.2.1
CDS Infomation	Serine/threonine-protein kinase ATM (AHRD V3.3 *** A0A151R6X6_CAJCA)
Sequence	ATGATGGATGATTCAAATTTCAAGGAAGATCCCCAAAATTTACCCTTTAATCTCAACCGT CCAATTACTCTTCTCTCTCTCTCTCTCTCTCAACTAACAGAAGAGGCAAGGCGATTCCTC CAGAAGTTTGCAAGCTCTGGTCGATTCTGGTTTGTTCCTTTCCTCTGTTTATGTTTATTC ATTTTATTTATCTGTTATAGTTTTTGTATGTTTGTGGTCTGTGTTTCTGATTATGTTTTT TTTTGGGGGGGGGGGATTTTTCTGAGCTGGGTGTGTTTTGTAACGTTTTATTTGGGTATG TCGAGTGAAGAAAAAACAGAGAAGAGCGAAAACCTAGATGGGTTGTCAGCTGAAGCATTG GACTCTGAAACCCTAATGGCTGATTCTGTAACTGGGTTGTCTGATGAGGTGCCTAGGGTT TCTGATGATAATGGAAATGTGGATACTGGTGCTATTAGCGAGCCAGTTGTTGCTACAGAG GAGACCCTGGAAGTGGGGAGTGACGCTGGTGGTGATGTGGTGGAAGTTCATGGTTCACTG GATAATGTGAGTGGGGGAGAGCTTGCGAGTGAAGGGGCTGAAGCAGATCAAGGGTCTGGA CATTTGGTTGAGGAAATGAACGGAGAGGAGAATGTAGCTGGTGGTTCGGATGATGAGATG ATTGATGCTGTTGACGGAGAAACTGCTGAGGATAACTCTGGGGATGATACAACTAGTGTA AAACATGTTTATGCAGTTGGTGACTTTGTGTGGGGCAAGATTAAGAGTCATCCGTGGTGG CCAGGGCGTGTTTACGATGCTTCCACTGCCTCTGACTTTGCTATGAAGTATAATCAAACA GGTCGATTGCTAGTGGCATACTTTGGAGATGGGTCATTTTCTTGGTGCCCCCCTTCGCAA TTGGTGCCTTTTGTTGACAACTTTGAAAAAATGTCAAAGCAGAGCACTTCCAAGAGTTTC TTATATGCTGTTGAAAAAACCTTGGATGAAATTGGTGTGCTTGTGGAGTTTCAAATGACC TGCCAATGTGTCTCTGAAGAGAGTCTTACTGGACTTAGTTGGCCATTGGCAGTGAATGCT GGAATCAAAAAGGGTGTTCAAGTGCCTGTGTCAGAAACTGTCAGTCTTTTACTTTCTCAG TTTGAACCTGCGGAAAGACTTAAAGGTCTAAAACGTAATGCACTAACCAATTCTCATTCC AATATACTTGAGTTTGCTGTCTTGAATAGTTGGCTATCTGCTTTTTATCGTGCTAAGTAT GGACACCCTTTGGCTTCATATTGTGAACCCCTTCTAGTTGAAGGCCTCGAGGACAAGAAG GAAGATCAAGTCATTGATGCAAATGACTTCAGCATACCCATTGAGGTTCCCATTCAGGGT CCATCAGAAGAAATTCCTAATTCTGGATCTTCAAAGTTTCCTATGACTGCCTGCGACAAG ATTTATCAGAAGAGGAAGCAGAAAAGTGTGGCTGAACTTATGGGAGAGAACGCCAAGCCC AAAGGTAAGAAGACAACTGAAGACGATTCTACACCTTCGTCTGTAGAAACATCCGAGAAG AAAAGGAAGAAGTCTGGTGAGAAAGCTAAAGGTCAAACTGGCAGCTCGATGAGTGTTGAT GAAAAAATTGGTAAGAGGGTCAACAAGAAGTCTGGTGACAGTGACTTGGTGAAAACAAAG AAACTTAGTGTTTCAATTCCTGAGAGTGATGAAGTTGGCAACCAGCAAGACAATGCGGGC CCTTTATCAAGGGAAAGAAAGAAGAGCAAGTATTTGTCACCTCCTTATACAAGCCCCAAG TGGAATGCAGGAAAATCAAGCTTTAAGAGAGAACTGGCAATAGAATCACAGAAATTTTCT GATAATTCCAAGATTGGTGAGAGGATGACAAAGGCTGCACGTCTTCTTTTGTCTTCTCCT GATTCGAATGGGAAAGAGGCCTTCAAGGATGACGTTGACAAGAGTTCTGGGATCAATAAG CGAAGCTCTAGGACTTTTGATACCGTGGCTATCAATTCATCTGTGGATGAAGTTTTGTCC GAGGTTCAGTCTACTGCTCTAAACCCTCTTCTGTTGAGGAATGGATCTCTTGAGAAGGCC AGAGGTTTCATTTCCACTTTCAGAAACTCGCTATATTATGATGGATCAAACTACAAGCAG TATCACCAAATGGAAACAGGAAAGAAGAGAAAATCCGCGGGATCAGGAAATCTAATTTCC CAGAGTGATACTGAATCACCAGACTCCATTCCTTCAAAGAAGAGGAAGACAAATTATGCA AAATCAGAAGTTACCAAACTCAAAAAAGACTATGGTCCTTCTAGTCAGGGAAAAGAAGAT GAGGATGATGGTAGAGAAGCTTCATCTGTGATTCTGTTGGTGGCATTTTTGACTGGTTTT TCTTTGCCACCAGAAGATGAAATCATTCGAATATATAACAAGTTTGGAGAGCTGAATGAA GAGGAAACAGAAGTGCTTCGTGATTCGAACTCTGTTCGAATTGTCTACAGGCATGGTGCA GATGCTGCACAGGCCTTTAAAGAATCGGTAAGGCAAAGTCCTTTTGGTGCTGCTAATGTG AACTTTACGCTCAGCTATTCCTCTAAATCTGAGAGTCCACTATCCTCGCTAAAAGCTCGT AAGGGGAAGTCACAGGTACAACTAATCAAGCAGAAGCTGAAAGGGATGGCATCAATATTG GATAAGTGCAAGGGTAAGATTACAAGCGCTGAGAAATCAGAGTTGGAGAATGAGATAAAA GGCTTGGTGGAGAAGGTAAGTGTTCTCCTTTTGTTGATAGTGTTAGTATATTGTCCAGCT TATGATGCTAGCTCTGTACAATTGATTTGCTCAAGTTACTATAAAGTTGCAATTACTTTG ATTAGTTTTTTAAAAATGCGTTTGTGTTTTGCATTTATGAATATTCTTGTCAATGGATAC AGTCGGTTTTCTGAGTCTATTATTTGCACATTCAGAGTTAATATCATACTGATATGA

Peptide Sequence

PEP ID	Solyc02g086750.2.1
PEP Infomation	Serine/threonine-protein kinase ATM (AHRD V3.3 *** A0A151R6X6_CAJCA)
Sequence	MMDDSNFKEDPQNLPFNLNRPITLLSLSLSQLTEEARRFLQKFASSGRFWFVPFLCLCLF ILFICYSFCMFVVCVSDYVFFWGGGIFLSWVCFVTFYLGMSSEEKTEKSENLDGLSAEAL DSETLMADSVTGLSDEVPRVSDDNGNVDTGAISEPVVATEETLEVGSDAGGDVVEVHGSL DNVSGGELASEGAEADQGSGHLVEEMNGEENVAGGSDDEMIDAVDGETAEDNSGDDTTSV KHVYAVGDFVWGKIKSHPWWPGRVYDASTASDFAMKYNQTGRLLVAYFGDGSFSWCPPSQ LVPFVDNFEKMSKQSTSKSFLYAVEKTLDEIGVLVEFQMTCQCVSEESLTGLSWPLAVNA GIKKGVQVPVSETVSLLLSQFEPAERLKGLKRNALTNSHSNILEFAVLNSWLSAFYRAKY GHPLASYCEPLLVEGLEDKKEDQVIDANDFSIPIEVPIQGPSEEIPNSGSSKFPMTACDK IYQKRKQKSVAELMGENAKPKGKKTTEDDSTPSSVETSEKKRKKSGEKAKGQTGSSMSVD EKIGKRVNKKSGDSDLVKTKKLSVSIPESDEVGNQQDNAGPLSRERKKSKYLSPPYTSPK WNAGKSSFKRELAIESQKFSDNSKIGERMTKAARLLLSSPDSNGKEAFKDDVDKSSGINK RSSRTFDTVAINSSVDEVLSEVQSTALNPLLLRNGSLEKARGFISTFRNSLYYDGSNYKQ YHQMETGKKRKSAGSGNLISQSDTESPDSIPSKKRKTNYAKSEVTKLKKDYGPSSQGKED EDDGREASSVILLVAFLTGFSLPPEDEIIRIYNKFGELNEEETEVLRDSNSVRIVYRHGA DAAQAFKESVRQSPFGAANVNFTLSYSSKSESPLSSLKARKGKSQVQLIKQKLKGMASIL DKCKGKITSAEKSELENEIKGLVEKVSVLLLLIVLVYCPAYDASSVQLICSSYYKVAITL ISFLKMRLCFAFMNILVNGYSRFSESIICTFRVNIILI*

Transcript Sequence

Transcript ID	Solyc02g086750.2.1
Transcript Infomation	Serine/threonine-protein kinase ATM (AHRD V3.3 *** A0A151R6X6_CAJCA)
Sequence	ATGATGGATGATTCAAATTTCAAGGAAGATCCCCAAAATTTACCCTTTAATCTCAACCGT CCAATTACTCTTCTCTCTCTCTCTCTCTCTCAACTAACAGAAGAGGCAAGGCGATTCCTC CAGAAGTTTGCAAGCTCTGGTCGATTCTGGTTTGTTCCTTTCCTCTGTTTATGTTTATTC ATTTTATTTATCTGTTATAGTTTTTGTATGTTTGTGGTCTGTGTTTCTGATTATGTTTTT TTTTGGGGGGGGGGGATTTTTCTGAGCTGGGTGTGTTTTGTAACGTTTTATTTGGGTATG TCGAGTGAAGAAAAAACAGAGAAGAGCGAAAACCTAGATGGGTTGTCAGCTGAAGCATTG GACTCTGAAACCCTAATGGCTGATTCTGTAACTGGGTTGTCTGATGAGGTGCCTAGGGTT TCTGATGATAATGGAAATGTGGATACTGGTGCTATTAGCGAGCCAGTTGTTGCTACAGAG GAGACCCTGGAAGTGGGGAGTGACGCTGGTGGTGATGTGGTGGAAGTTCATGGTTCACTG GATAATGTGAGTGGGGGAGAGCTTGCGAGTGAAGGGGCTGAAGCAGATCAAGGGTCTGGA CATTTGGTTGAGGAAATGAACGGAGAGGAGAATGTAGCTGGTGGTTCGGATGATGAGATG ATTGATGCTGTTGACGGAGAAACTGCTGAGGATAACTCTGGGGATGATACAACTAGTGTA AAACATGTTTATGCAGTTGGTGACTTTGTGTGGGGCAAGATTAAGAGTCATCCGTGGTGG CCAGGGCGTGTTTACGATGCTTCCACTGCCTCTGACTTTGCTATGAAGTATAATCAAACA GGTCGATTGCTAGTGGCATACTTTGGAGATGGGTCATTTTCTTGGTGCCCCCCTTCGCAA TTGGTGCCTTTTGTTGACAACTTTGAAAAAATGTCAAAGCAGAGCACTTCCAAGAGTTTC TTATATGCTGTTGAAAAAACCTTGGATGAAATTGGTGTGCTTGTGGAGTTTCAAATGACC TGCCAATGTGTCTCTGAAGAGAGTCTTACTGGACTTAGTTGGCCATTGGCAGTGAATGCT GGAATCAAAAAGGGTGTTCAAGTGCCTGTGTCAGAAACTGTCAGTCTTTTACTTTCTCAG TTTGAACCTGCGGAAAGACTTAAAGGTCTAAAACGTAATGCACTAACCAATTCTCATTCC AATATACTTGAGTTTGCTGTCTTGAATAGTTGGCTATCTGCTTTTTATCGTGCTAAGTAT GGACACCCTTTGGCTTCATATTGTGAACCCCTTCTAGTTGAAGGCCTCGAGGACAAGAAG GAAGATCAAGTCATTGATGCAAATGACTTCAGCATACCCATTGAGGTTCCCATTCAGGGT CCATCAGAAGAAATTCCTAATTCTGGATCTTCAAAGTTTCCTATGACTGCCTGCGACAAG ATTTATCAGAAGAGGAAGCAGAAAAGTGTGGCTGAACTTATGGGAGAGAACGCCAAGCCC AAAGGTAAGAAGACAACTGAAGACGATTCTACACCTTCGTCTGTAGAAACATCCGAGAAG AAAAGGAAGAAGTCTGGTGAGAAAGCTAAAGGTCAAACTGGCAGCTCGATGAGTGTTGAT GAAAAAATTGGTAAGAGGGTCAACAAGAAGTCTGGTGACAGTGACTTGGTGAAAACAAAG AAACTTAGTGTTTCAATTCCTGAGAGTGATGAAGTTGGCAACCAGCAAGACAATGCGGGC CCTTTATCAAGGGAAAGAAAGAAGAGCAAGTATTTGTCACCTCCTTATACAAGCCCCAAG TGGAATGCAGGAAAATCAAGCTTTAAGAGAGAACTGGCAATAGAATCACAGAAATTTTCT GATAATTCCAAGATTGGTGAGAGGATGACAAAGGCTGCACGTCTTCTTTTGTCTTCTCCT GATTCGAATGGGAAAGAGGCCTTCAAGGATGACGTTGACAAGAGTTCTGGGATCAATAAG CGAAGCTCTAGGACTTTTGATACCGTGGCTATCAATTCATCTGTGGATGAAGTTTTGTCC GAGGTTCAGTCTACTGCTCTAAACCCTCTTCTGTTGAGGAATGGATCTCTTGAGAAGGCC AGAGGTTTCATTTCCACTTTCAGAAACTCGCTATATTATGATGGATCAAACTACAAGCAG TATCACCAAATGGAAACAGGAAAGAAGAGAAAATCCGCGGGATCAGGAAATCTAATTTCC CAGAGTGATACTGAATCACCAGACTCCATTCCTTCAAAGAAGAGGAAGACAAATTATGCA AAATCAGAAGTTACCAAACTCAAAAAAGACTATGGTCCTTCTAGTCAGGGAAAAGAAGAT GAGGATGATGGTAGAGAAGCTTCATCTGTGATTCTGTTGGTGGCATTTTTGACTGGTTTT TCTTTGCCACCAGAAGATGAAATCATTCGAATATATAACAAGTTTGGAGAGCTGAATGAA GAGGAAACAGAAGTGCTTCGTGATTCGAACTCTGTTCGAATTGTCTACAGGCATGGTGCA GATGCTGCACAGGCCTTTAAAGAATCGGTAAGGCAAAGTCCTTTTGGTGCTGCTAATGTG AACTTTACGCTCAGCTATTCCTCTAAATCTGAGAGTCCACTATCCTCGCTAAAAGCTCGT AAGGGGAAGTCACAGGTACAACTAATCAAGCAGAAGCTGAAAGGGATGGCATCAATATTG GATAAGTGCAAGGGTAAGATTACAAGCGCTGAGAAATCAGAGTTGGAGAATGAGATAAAA GGCTTGGTGGAGAAGGTAAGTGTTCTCCTTTTGTTGATAGTGTTAGTATATTGTCCAGCT TATGATGCTAGCTCTGTACAATTGATTTGCTCAAGTTACTATAAAGTTGCAATTACTTTG ATTAGTTTTTTAAAAATGCGTTTGTGTTTTGCATTTATGAATATTCTTGTCAATGGATAC AGTCGGTTTTCTGAGTCTATTATTTGCACATTCAGAGTTAATATCATACTGATATGAGCT TGTTTATGGATACAATAGCCTTGTGAAGTTTGTATTTGTCACGTGACTGCAGAAGTTTAG TGTCTATATCAAAGGCATTCTATATATTTCTTTTAATGAATTATCAAGAATGTACCTTCC GGGTGCCAATGAATGTCTGTGATAAGCCCAAAACAGTCGTGAAGTTCTGCTAACCATAAT ATCAAAGCACAGATAGTGAAGAAAGGTATTGTCCAGCATCAAGCATTAAGCAGTTACGAA TACATCAATTACAATTAGAGGGAGTCAAGAGTTCATTCTTTGGCATAATAATGGCTCATA ATCTTTGCCAAACATTGATTGGAGCTATAAGGCTGTGAACTAGCTATGTAACTCTAGATT TGGATATCAACCCAGTTAAAATTCTGACATTTTAGAAAAGAATATTTCAGGATTTGCAGA AAATGAATTGTAGTAGGTTTCAAAACATGTTTGAAGAATATTTATCCCTACTATTATTTC CGTTATTGAAGTTCCAGAACTATAATTGTTGTTGTAATGTACCATTTCGAATTAACTATG TTTTTTGGATTATTTATTTTTTTACAATTGTTTACAAGGGATCAAGGAAAGTTGAGTAGA ACCAAAA