Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g086680.3.1
CDS Infomation

peptide deformylase AF250958
Sequence

ATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCT
CTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCA
GCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCT
CAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTCCTGCTGAC
TTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAG
AATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGAT
ATTATGTACAAAACTGATGGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAA
CTAATGGTATTTAATGCAGCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAAT
CCACGTGTCAGTAGATATTCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTT
CCAATGATACATGGTGATGTTAAGAGACCAGAGTCAGTTAAGGTTGACGCACAGGACATT
AATGGTACAAGGTTTGAGATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAA
TTTGATCACCTACAGGTCAGCAATGTGCAGGGAGTTCTTTTCTTTGACAAAATGACTGAC
GAAGTCCTGGACACCATTCGTGAAAAATTAGTGGCGCTAGAAAAGAAATATGAAGATAGG
ACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGA
TTTGGCAAATCATGA

Peptide Sequence

PEP ID

Solyc02g086680.3.1
PEP Infomation

peptide deformylase AF250958
Sequence

MAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYA
QARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFD
IMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSF
PMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQVSNVQGVLFFDKMTD
EVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS*

Transcript Sequence

Transcript ID

Solyc02g086680.3.1
Transcript Infomation

peptide deformylase AF250958
Sequence

AATTATCTAGGGTCTAAAATTCTAGTGTAACAATACACGAAGGACAAAATTAGTAATATT
TGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCA
AGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCG
TCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTC
TCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTA
TCTTCCAAAACCAAAGGAGATGAAATAGCAACTCCTGCTGACTTGAGCTTCGTGGTTCCA
TTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAAT
TTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAAACTGAT
GGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAACTAATGGTATTTAATGCA
GCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAATCCACGTGTCAGTAGATAT
TCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTTCCAATGATACATGGTGAT
GTTAAGAGACCAGAGTCAGTTAAGGTTGACGCACAGGACATTAATGGTACAAGGTTTGAG
ATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAATTTGATCACCTACAGGTC
AGCAATGTGCAGGGAGTTCTTTTCTTTGACAAAATGACTGACGAAGTCCTGGACACCATT
CGTGAAAAATTAGTGGCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCT
GAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATT
TACTGGGATCTATGAAATCTTCTCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCA
GCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGC
CAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAG
GGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAA
CACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCA
AGAGAAGTTCCATAAGTTCCCCAGCAGAATGGTTTTTAAACTCTTTTCTTGGTAATTGTT
ATACCTCTGAAAGGCAATCCATGAACTACAGGCTAAATGAACAGCTTGTAATGTATATGT
GAGCAATAAATTATCCCTTCACAGCCACTGCTGATGTTTTGTGATGGCAGTTTTCCCATC
AAAATATAATTGATCAATCATGCTGTGGTTTTTATAGAGATTAGGAGCAAGGCGGCTCAG
CCACTATAGCAGTGATTTTAGGCCCTAAAAAATAAGGGCTGCCAAAGAACCAAAATCCCC
CCAAATTCAGTTTGCTCAAATAAGAAAACACACCCAAGGTGAACAGGAAACAATTGAAGA
CGTAAAATGTTACTATTCTTAATTAGCAAAATATACAAAAATTATGTATTTATTGTTATT
ATTAATTAATTTTTTCGTAATAATTTGTAGCTAATCTCTTGCTCATTATTATCCACATAT
TTTTGAAATTTTATTAATGATGTAATTATAATTAACCATAG