Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g086660.3.1
CDS Infomation	RNA helicase DEAD10
Sequence	ATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACC CTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAAT CCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCA CAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGT TCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAG GGTATTCAGACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGT TATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAA ATTTCTGTCTCAGGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTT CCTTCAGAGATTTTGAGGGAGGTATTACTATGCGATATTTGCTCCAGTGTGGAGCTAAAT GTCGTACGCTGTGCAACCCTCTTTTTGGTCTTCCTTGTATTTGGAATTCCCTTATTTGGT GGACCAAATTTTGAAGGGCTTTCTGAATCATCCTTGTTCATGGCTGGGACTGCTGTTGGT GGTGTTAGTCTGCCACATGAGGTTTTCCAACTTTTACATTTCCAGATACATCAAGCTGGG TTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGAC ATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTT ATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCG CCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCA AAGATTTCTTGCACGTGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTG GATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATG AGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTG GACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAG ACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTG GTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATT ACACAGTACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTG AGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGAC CAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCT CAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTT GCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAGGGTGGTGGTCAACTAT GATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGT GCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTT ATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCT CGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAA GGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGT TGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAGA GATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAA ACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGT TCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCT GAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTC ACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGAT GGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAA

Peptide Sequence

PEP ID	Solyc02g086660.3.1
PEP Infomation	RNA helicase DEAD10
Sequence	MAATATASSTGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYEKPVATPHVGAA QHKSSVSVSSSVERPSQSQCSDHGDNRGTNGALSKLSSGEGIQTARANELSRDETSAPKG YSASAAASDISPDAYRRQHEISVSGGDVPPPFTSFEATGFPSEILREVLLCDICSSVELN VVRCATLFLVFLVFGIPLFGGPNFEGLSESSLFMAGTAVGGVSLPHEVFQLLHFQIHQAG FPAPSPIQAQSWPIALQGRDIVAVAKTGSGKTLGFLLPGFILLKQRRSNPQSGPTILVLS PTRELATQIQDEAVKFGRSSKISCTCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEM RRVRLDQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRRIAADLL VNPVQVNIGNVDELVANKSITQYIEVLSYMDKQKRLDQILRSQEPGSKIIIFCSTKKMCD QLARNLTHPFGAAAIHGDKSQGERDHVLSQFRTGKSPVLVATDVAARGLDVKDIRVVVNY DFPTGIEDYVHRIGRTGRAGATGEAYTFFVDQDAKHASDLIKVLEGANQQVPTELRDMAS RGGGMGRARRQWDSGSGGREGGHGGRYDAGYGGRDGARGGWEAPSSERSGRVYDSDSRDR DRHGHGSDAPASFHGRSFHETMMQGSQRRDRSRSRSPNRGSGWGDRKGRERSRSRSAERS ERTRIQVPVGGSFHEAMMGFTRSSAGDSRKDWEKERSQGDGKSGDGPRANNWEE*

Transcript Sequence

Transcript ID	Solyc02g086660.3.1
Transcript Infomation	RNA helicase DEAD10
Sequence	ATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACC CTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAAT CCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCA CAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGT TCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAG GGTATTCAGACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGT TATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAA ATTTCTGTCTCAGGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTT CCTTCAGAGATTTTGAGGGAGGTATTACTATGCGATATTTGCTCCAGTGTGGAGCTAAAT GTCGTACGCTGTGCAACCCTCTTTTTGGTCTTCCTTGTATTTGGAATTCCCTTATTTGGT GGACCAAATTTTGAAGGGCTTTCTGAATCATCCTTGTTCATGGCTGGGACTGCTGTTGGT GGTGTTAGTCTGCCACATGAGGTTTTCCAACTTTTACATTTCCAGATACATCAAGCTGGG TTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGAC ATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTT ATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCG CCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCA AAGATTTCTTGCACGTGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTG GATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATG AGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTG GACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAG ACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTG GTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATT ACACAGTACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTG AGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGAC CAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCT CAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTT GCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAGGGTGGTGGTCAACTAT GATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGT GCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTT ATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCT CGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAA GGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGT TGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAGA GATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAA ACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGT TCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCT GAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTC ACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGAT GGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAAGAAGGTAAAGGAGAG CCTGTGTTGATTTTTGATGTGTTGTAGGAAATGCTGGAAGAAAAAGGGGTCATTTTTGTT AAACTTTAACCACTACATGTTTTGGCAAACAGTGTTCTCGGATAGAAGAAGCTTTTAGCG TATTACTGGAAATAGATAGCTGAAAATCTGCAAATGGGAAGTTTTTGACGGATGTAAATG TAAAGTATTTTACCGTCAAACTTTGTTTAATGGAATCAGCCCACTTCTAAGTGTTGAGCA AATTTCTCTAGTTAATGCATTACTTTTACTCCTTCCATGTAGGGAAAGCAGAATTTACTC CTCCCCCGGAGGTATACAGGTTTTCTATAAAACTATTCACTATTAGTATGGAAGGGATAA CTCAAGTCAAAGTATTCATGAAGAACGCAAATAAATAGTAGATTAATGGTTTTCATATTA AGACCTTGGTATTATTGTATGAACAAAGGACTGATCGACAATGATCAAACGATAAAAAAG AAGAAGAGAGGATTGAAATTATATTCCTATATGAAAGGGTTTCCTGTTTTAATACATGAT TTTCCGCCAGATCAGAATAATTCAGTTTCAGTCATAGGCCTTAGTAGTTGATTTTGGTAT TGCACTAATGTATAAATTACACATCTTGAAATGCAATAACGATTGCTTTAAATATCTTCT TCCATCTTTTGCCATCCTTCCATTATTGACAGGGATTCTCAAACTACTTGCTAGTTCCTG ACCTAATCTTCCTATAACTCGAACCCAATCCACGAGTTCCTGTTTTTGGTTAACCTTTTC TTTACAGGGCATTATGACTACAGGATTTGACAACTTTCTTCACTTGTCACGCATCTTTTG GCTTCCCCCGTAATCTCTTTACTCTTGAATAAAGAAAGACTCCAGCTAGAGCCATAGCAG TCCCTGAATATATTGAACAGTGTCACAAGCTAGATAATTACTGATAGATAGATTCACTCA ACCAATCAATAGAGATGTTAAGAAACTGATATACTTGATTCCAAAAAAAAAAAAGTAGTA AGTAGAGAATCAATATTTACCAAGGGAGTTAATTGGTGAAACGGGTGTTTGGAAGAAGAT GACTGAGGATACAATGACTACCACTCTCTTCAGACAATTACCAACTGCATGTGTCACTGG TGATACCATCTGTAGTATCATGTATGAAACCTTTCCACAAAGAAAAAGATCAAGTAAGAA TGAAAC