Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g086520.3.1
CDS Infomation

DNA binding protein, putative (AHRD V3.3 *** B9SF87_RICCO)
Sequence

ATGAATTCATCGCAGTACATGGATAAGCAGATCATGGATCTATCGAATTCACAGAACAGC
AACAACAACAGTGACTTCATCGATCTCGTTAACCCTCAGGCGGATCGTCACATTAGCGGC
GATGATCAGAAGAAAGAAGATATTGTTCCCAGTTACGAATTTCATCCAATTCGCCCAATT
GGATCTTCATCGCCCAAATCTAATATTGATTCTAGTAATGTTGGCGTAGCTAGGGCTTGG
AATTCTGCTGATTCCAAAAACAACGCTGAGAGTTATATCAGAAATTATGGTTCTCTTGAC
ACAATTGGACCTACCAAGGTTATTTTGGAGAAAGATTTGGGCAGTGTTTATTCATCTCAA
TTATCAGAGATTGATCATACAGTTAAGAAGTATGCTGATAATCTTCTACATGCAGTGGAG
GGAGTGAGTGCTCGCCTATCACAGTTGGAGACTAGAAATCGCCAGATTGATAACTCTATT
GATGAACTCAAGTTGTCCGTTGGTAACAACCATGGTGTCACTGATGGAAAACTGAGACAA
CTAGAAAATATTCTCAGAGAGGTGCAAGATGGTGTTCAGGTGATAAGAGATAAACAAGAA
ATAATGGATGCTCAGTTGCAGCTCATGAAATCACAAGCTCCAAAGATTGAGCAGCAAGCG
GAAACCCATAGTACTACACATACAGATTCATCCCAACCTACAACTGCTCCTCTTCATTCT
CACCAGCAATTTCCTCCTGTTGCTCTTACACAACAACCTTCTACCCTAGCTCCTCCACCC
CCTCAACAGAATCTGCCATACCAAGTTCAACTTCAGAACCAGTTTCCCCATAATCCTATT
CCCTCCCATCCTCAGCCAGAAGCTTATTACCCACCAGCTGGTCAAGCACCAGAAAACTTA
GGTCATCAGTACCAATCGCCTGTAGCACAGCAGCATCAACCTTCCCCACCACCTCCTCAT
CAACAACATCAGTCCACCCCTCAGCCTATCTACTCTCAGCCACCTCCACCTGCTCAACCA
CATCTCCCTCATCCCTCGCAACCTCAACCTCAACCTCTAGTAGGCCATCATCGTGAAGAG
ACACCTTTTGTACCATCCCAGACTTATCCACCGCCAAGCATACGCCAACCTCCTCATTCA
TCTAGTGGAGCACCTCCATCACAGCAGTTATATGGAACTCCCCCTAATATATTTGAGCCC
CCATCTAGCAGACCTGGCCCCGGATATTCTGGTGTGTATGGACCATCCTCTATGCCTGGT
GACCCTTATCCTTATAGCAGTTCCCCAGGCCAGTATGGCAGTGGCTCTTCAATGAAACCA
CCACAAGTTTCCCTACCTTCTATGGGCCAGAGTGGTTCAAGTGGCTATCAGCAGCTCCCC
ACTGCAAGGATATTACCTCAAGCACTTCCTACTGCTTCTGCTGTTAGTGGTGGGTCTAGT
TCTCCCGGTAGTGGTAATAGGGTTCCTATTGATGATGTTGTTGACAAAGTTACAAACATG
GGATTTCCAAGAGACCAAGTAAGGGCAACAGTTCGGAGGTTGACTGAGAGTGGACAGACA
GTGGATTTGAATACGGTGTTGGACAAGTTAATGAATGATGGTGAAGTTCAGCCACCACGA
GGTTGGCTTGGTCGGTAG

Peptide Sequence

PEP ID

Solyc02g086520.3.1
PEP Infomation

DNA binding protein, putative (AHRD V3.3 *** B9SF87_RICCO)
Sequence

MNSSQYMDKQIMDLSNSQNSNNNSDFIDLVNPQADRHISGDDQKKEDIVPSYEFHPIRPI
GSSSPKSNIDSSNVGVARAWNSADSKNNAESYIRNYGSLDTIGPTKVILEKDLGSVYSSQ
LSEIDHTVKKYADNLLHAVEGVSARLSQLETRNRQIDNSIDELKLSVGNNHGVTDGKLRQ
LENILREVQDGVQVIRDKQEIMDAQLQLMKSQAPKIEQQAETHSTTHTDSSQPTTAPLHS
HQQFPPVALTQQPSTLAPPPPQQNLPYQVQLQNQFPHNPIPSHPQPEAYYPPAGQAPENL
GHQYQSPVAQQHQPSPPPPHQQHQSTPQPIYSQPPPPAQPHLPHPSQPQPQPLVGHHREE
TPFVPSQTYPPPSIRQPPHSSSGAPPSQQLYGTPPNIFEPPSSRPGPGYSGVYGPSSMPG
DPYPYSSSPGQYGSGSSMKPPQVSLPSMGQSGSSGYQQLPTARILPQALPTASAVSGGSS
SPGSGNRVPIDDVVDKVTNMGFPRDQVRATVRRLTESGQTVDLNTVLDKLMNDGEVQPPR
GWLGR*

Transcript Sequence

Transcript ID

Solyc02g086520.3.1
Transcript Infomation

DNA binding protein, putative (AHRD V3.3 *** B9SF87_RICCO)
Sequence

CGACAAATATTTTTTTTTTCTGAAACAACACAAAAGCTTCAATTTGATTCAATCAAATAA
GCTTCTTACATGAATTCATCGCAGTACATGGATAAGCAGATCATGGATCTATCGAATTCA
CAGAACAGCAACAACAACAGTGACTTCATCGATCTCGTTAACCCTCAGGCGGATCGTCAC
ATTAGCGGCGATGATCAGAAGAAAGAAGATATTGTTCCCAGTTACGAATTTCATCCAATT
CGCCCAATTGGATCTTCATCGCCCAAATCTAATATTGATTCTAGTAATGTTGGCGTAGCT
AGGGCTTGGAATTCTGCTGATTCCAAAAACAACGCTGAGAGTTATATCAGAAATTATGGT
TCTCTTGACACAATTGGACCTACCAAGGTTATTTTGGAGAAAGATTTGGGCAGTGTTTAT
TCATCTCAATTATCAGAGATTGATCATACAGTTAAGAAGTATGCTGATAATCTTCTACAT
GCAGTGGAGGGAGTGAGTGCTCGCCTATCACAGTTGGAGACTAGAAATCGCCAGATTGAT
AACTCTATTGATGAACTCAAGTTGTCCGTTGGTAACAACCATGGTGTCACTGATGGAAAA
CTGAGACAACTAGAAAATATTCTCAGAGAGGTGCAAGATGGTGTTCAGGTGATAAGAGAT
AAACAAGAAATAATGGATGCTCAGTTGCAGCTCATGAAATCACAAGCTCCAAAGATTGAG
CAGCAAGCGGAAACCCATAGTACTACACATACAGATTCATCCCAACCTACAACTGCTCCT
CTTCATTCTCACCAGCAATTTCCTCCTGTTGCTCTTACACAACAACCTTCTACCCTAGCT
CCTCCACCCCCTCAACAGAATCTGCCATACCAAGTTCAACTTCAGAACCAGTTTCCCCAT
AATCCTATTCCCTCCCATCCTCAGCCAGAAGCTTATTACCCACCAGCTGGTCAAGCACCA
GAAAACTTAGGTCATCAGTACCAATCGCCTGTAGCACAGCAGCATCAACCTTCCCCACCA
CCTCCTCATCAACAACATCAGTCCACCCCTCAGCCTATCTACTCTCAGCCACCTCCACCT
GCTCAACCACATCTCCCTCATCCCTCGCAACCTCAACCTCAACCTCTAGTAGGCCATCAT
CGTGAAGAGACACCTTTTGTACCATCCCAGACTTATCCACCGCCAAGCATACGCCAACCT
CCTCATTCATCTAGTGGAGCACCTCCATCACAGCAGTTATATGGAACTCCCCCTAATATA
TTTGAGCCCCCATCTAGCAGACCTGGCCCCGGATATTCTGGTGTGTATGGACCATCCTCT
ATGCCTGGTGACCCTTATCCTTATAGCAGTTCCCCAGGCCAGTATGGCAGTGGCTCTTCA
ATGAAACCACCACAAGTTTCCCTACCTTCTATGGGCCAGAGTGGTTCAAGTGGCTATCAG
CAGCTCCCCACTGCAAGGATATTACCTCAAGCACTTCCTACTGCTTCTGCTGTTAGTGGT
GGGTCTAGTTCTCCCGGTAGTGGTAATAGGGTTCCTATTGATGATGTTGTTGACAAAGTT
ACAAACATGGGATTTCCAAGAGACCAAGTAAGGGCAACAGTTCGGAGGTTGACTGAGAGT
GGACAGACAGTGGATTTGAATACGGTGTTGGACAAGTTAATGAATGATGGTGAAGTTCAG
CCACCACGAGGTTGGCTTGGTCGGTAGCATGGTTCGTCTTGTTCAAGTTCTTGTATAGAT
TCTTGAGTTTCGAAGTCTTAAATTTTTTACTATGCTTGGATTTAAGTGGCATTCTTTAAC
GGTTTGGCGCTTTGTTTTTGGGACTGTCCTGAAACTTGATACTTGTTCTTGCTCACTAGA
TAGAGATTTGTTGATGTGACATTTCCCTTTGTTTTGCGTTTCCTTTCTTCTATTCTCTTG
TACAGCATGATTGGAGACATGTAACTTTGCTTTTGTTTGATCAGTTTTTGTGCTTTGCTT
TTTTTTTTTTTGGTCAGTTCCTGCATAAACTTATAGTGTATGGATAATAGGTTCAATCTT
TTAGTTCATTATGTGGATCTTTCTTTTTCTGCTAACCATGTGGATTAGATTTTATGATAA
GATAAAAGTTCTTTAATGTGAATTGTTAGTACTATGATGGAAAGAAAACCATTTTATTTG
CAAATTAACTTAATCTTTTTTTACAAGAAATTGTTACATTCTTTAAAATTATCATTCTTG
AGTTGGACTGATTTATTTTATTATATTAGTACTTGTATTTTTCTTTTGTGGTAAATACCT
GTTTGGTTGCATATATTCATTCAACGCAATCTTTAAAAGACATACGATAAGTAGGACTTC
TAATTTCTTACAGGGATTCCAATAGTAAATACAGTAATATAGATTTATTAACCAAAAAGT
CCAAATCATTAGTTTAATTATAACTCTATGCATGAGAAAGATATATTGTTATATAGGAAT
GTATATTAAGTTCGGAATTAATAAATGATCGTGCACTTTTCCCCTTTAGATTGGTGGCAT
TAACAAATATTATTAAGAACTGTATATTGGACGGATGAACAAATAATTACACTATTATGT
TTACTGATTTGACTTATTATATATATTCTTTTTTTGGTTGGTGAGAGTATTTGAAGAATT
AAATGAGGTGCGCAGAAGTTGGTTCTGTTACTATAATTATCAAAATAAAAG