Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g086200.2.1
CDS Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9S0T5_9ROSA)
Sequence	ATGTCTGCTACTTTACTTGTCGCTCCCAATTCGAATACCCTCTGTTGTCACCATGCCAAT TCGTTTATCAACCAAAAAACTCTTCTTTTTTCCAAATCTTTCAATTCTAAATTTACCACC TTTTCCTCTCAATCCAATGATAATAATAATCCCATCAAGAAAGTGGAGCAATGCAATCTT GAATTTGAAAATCAAGATTATGGGTCATCAAGTTCAGGAATTAAAGGCCCTACTGCTCCA TGGATGAGGGGTCCTCTTCTTCTTGAACCTAATCAAGTTTTGGACTTATCCAAATCAAGA AAAAAGAAAGATACCAATTTTGCGAAAACCCAAAACCCTAATGATGCACTTTCTGGTAAA GTTAGTGGAGGAAGAGGTAAAAAAGCAATGAAGATGATTTATCAAGGAATTGATAAACTC CAAGAAACGCAAATTGGGGAATGTACACAGGTGGAAACTGATGTGAAGGTTGAATTTCAG TTCCCACCAGGATCTTTATCTGGATGGGGAGATGTGAGTTATGAAATTGAGGAGAAAAAC CCATATGGGGAGGAGGACAATGTGGAAAGCCTCGAGGGAGTGGAATTTGGTGTTTTATCA AGAGAAGGGGAAGGAAGAGGGAGTAGAAAAAGTGGGGCGAGAATGCCATGGGAGAGTGAG GAGAGAATTGTGTATAGGAGAATGAAGAAGGAGAAAGTTGTCAGGACTGCAGAGTCGAAT CTTGATGCAATGTTGCTTGAGAGATTGAGGGGTGAGGCTGCAAGGATTCAGAAGTGGGTG AAGGTTAAGAAAGCAGGAGTTACCCGAACTGTTGTTGATCAAATCCAATTTATTTGGAAG AATAATGAACTTGCAATGCTCAAATTTGACCTGCCTTTATGCCGTAATATGGACAGAGCT CGAGACATTGTCGAGATGAAGACTGGAGGCTTTGTTGTTTGGATGAAGCAAAATGCTCTG GTTGTTTATAGAGGATGTAGCTATACTTTACAACTAAAGGAGCTACAGCATGATTTTTTA CGTAGTCACCAGAACCCTTCGTTTACTGAAAATATTGAAGAGACAAGTATTTTCTCACCA TTGAACTTAAGTGGGAGCAGTGAAGATGAAATGATAAGTGTTGGAAACTCAGAAGAGGAT AGCCTAGTAATGAATGAGTCACTTTACGAGAGGGAAGCTAATAGATTATTGGATGACTTA GGACCTCGTTATGTTGATTGGTGGTGGCCAAAGCCTTTGCCTGTGGATGCGGATTTACTT CCTGAAGTAGTTCCTGGATTTAAGCCACCATTTAGACTTTGCCCACCACGTTCAAGATCA AAGCTGACAGATGATGAACTTACACAATTAAGGAAACTTGCTCGTTCTTTGCCAACTCAT TTTGTCCTTGGGAGAAACAGAAAACTGCAAGGCTTGGCAGCAGCACTCGTAAAGTTGTGG GAGAAATGTCATATAGCAAAGATAGCTTTGAAGTGGGGAATTCCAAATGCTAGCAATGAG CTAATGGCAAATGAGTTAAAGTATCTTACAGGAGGAGTCCTTTTATTGCGGAATAAGTTC TTTATAATCCTATACAGAGGCAAGGATTTTCTTCCTTCTCAAGTTGCAAAACTTGTAGCT GAAAGGGAGGTGGAGCTCACAAGATGTCAGCTTGAGGAAGAAGTTGCACGATTCAAAGCA ATTGAAACTCTTCCAATCACTATGGAAGCATCAATGAGCAGTAGTATTGTTGGGACTTTA TCAGAATTCCAGACAATTGCAGAACCTGGAAAGGAGAAATCTGAGGTTGAAGTTCAATTG ATGTCTGAAAAGGAAAGATTAGAAAAAGAAGTGAGGAATCAACAGGACAGCCTTTACATT CTCAAGAAGAAGATTGAAAAATCATCTATAGCACTGGGAAAGCTAAATGCTGCCTGGAGA CCTGCCAAAGAGGATGACGATAAAGAAATCTTAACACAGGAAGAAAGACGATCTCTTAGG CAGATAGGATTAAAGATGGACAGGAGTTTAGTTCTTGGGAGACGTGGTGTTTTTGATGGT GTCTTAGCTGGTCTCCATCAGCATTGGAAGCACAGAGAAGTTATTAAGGTGATCACAATG CAGAAAATCTTTTCTCAGGTCATTCATACTGCAAAGCTCCTGGAGACAGAAAGTGGTGGA ATACTGATTTCTGTTGACAAAATTAAAGAAGGCCATGCAATAATAATTTATCGGGGAAAG AACTACAGACGCCCAGAGTTGGTTCCTCAAAATCTTCTAAACAAAAGACAAGCTTTATGT CGGTCCCTGGAAATGCAGAGACTTGGATCATTGAAGTTTTATGCAAATCAAACGGAGCAG GCAATCTCTGATCTTAAGTTGAAATTGGTAGAATATACAGTAAAGATTGGTCAAATGGGG GAGATCTAA

Peptide Sequence

PEP ID	Solyc02g086200.2.1
PEP Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9S0T5_9ROSA)
Sequence	MSATLLVAPNSNTLCCHHANSFINQKTLLFSKSFNSKFTTFSSQSNDNNNPIKKVEQCNL EFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQNPNDALSGK VSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSGWGDVSYEIEEKN PYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKVVRTAESN LDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMDRA RDIVEMKTGGFVVWMKQNALVVYRGCSYTLQLKELQHDFLRSHQNPSFTENIEETSIFSP LNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLL PEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVKLW EKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKLVA EREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTIAEPGKEKSEVEVQL MSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILTQEERRSLR QIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAKLLETESGG ILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQ AISDLKLKLVEYTVKIGQMGEI*

Transcript Sequence

Transcript ID	Solyc02g086200.2.1
Transcript Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9S0T5_9ROSA)
Sequence	GTTTACTTTCTCCCTTTGCACCACAGATCATCAAGAACACCACAACATCTCTTAAAAAAT TGACAGAGACACGGATTGCTGATATGTGGTTTTTAAGAAAGAAACATATACATCAAAATT AAGTTGCTTGATTCTTTAACTTGATCCTGAAATAGGGTAATAGATAAATAAAAGGTATAT TTAAGTTTTTTTAAATAGTTTAAAAATATTTTAAAATCTTTTTTATTTGAAAATTGACTC TATAAATACACGAATGATATTAATATCAGATACCTAGATAAAATTTTAATATAAAATACA CGGGATAAAATTGATTTTATATATTATAATATATAAAATTATGAAATATCAAGAGAGAGG GAAGCAAGAAAATCAGTTGAGTATTTGTTTATTTAATAGAGTGCTTTGTGTTGTTTCGTC TTTCTTCTTGATAAAACTTGGAAACTGGTAAGAGCTTAGCGAATTCAACATATCCATGTC TGCTACTTTACTTGTCGCTCCCAATTCGAATACCCTCTGTTGTCACCATGCCAATTCGTT TATCAACCAAAAAACTCTTCTTTTTTCCAAATCTTTCAATTCTAAATTTACCACCTTTTC CTCTCAATCCAATGATAATAATAATCCCATCAAGAAAGTGGAGCAATGCAATCTTGAATT TGAAAATCAAGATTATGGGTCATCAAGTTCAGGAATTAAAGGCCCTACTGCTCCATGGAT GAGGGGTCCTCTTCTTCTTGAACCTAATCAAGTTTTGGACTTATCCAAATCAAGAAAAAA GAAAGATACCAATTTTGCGAAAACCCAAAACCCTAATGATGCACTTTCTGGTAAAGTTAG TGGAGGAAGAGGTAAAAAAGCAATGAAGATGATTTATCAAGGAATTGATAAACTCCAAGA AACGCAAATTGGGGAATGTACACAGGTGGAAACTGATGTGAAGGTTGAATTTCAGTTCCC ACCAGGATCTTTATCTGGATGGGGAGATGTGAGTTATGAAATTGAGGAGAAAAACCCATA TGGGGAGGAGGACAATGTGGAAAGCCTCGAGGGAGTGGAATTTGGTGTTTTATCAAGAGA AGGGGAAGGAAGAGGGAGTAGAAAAAGTGGGGCGAGAATGCCATGGGAGAGTGAGGAGAG AATTGTGTATAGGAGAATGAAGAAGGAGAAAGTTGTCAGGACTGCAGAGTCGAATCTTGA TGCAATGTTGCTTGAGAGATTGAGGGGTGAGGCTGCAAGGATTCAGAAGTGGGTGAAGGT TAAGAAAGCAGGAGTTACCCGAACTGTTGTTGATCAAATCCAATTTATTTGGAAGAATAA TGAACTTGCAATGCTCAAATTTGACCTGCCTTTATGCCGTAATATGGACAGAGCTCGAGA CATTGTCGAGATGAAGACTGGAGGCTTTGTTGTTTGGATGAAGCAAAATGCTCTGGTTGT TTATAGAGGATGTAGCTATACTTTACAACTAAAGGAGCTACAGCATGATTTTTTACGTAG TCACCAGAACCCTTCGTTTACTGAAAATATTGAAGAGACAAGTATTTTCTCACCATTGAA CTTAAGTGGGAGCAGTGAAGATGAAATGATAAGTGTTGGAAACTCAGAAGAGGATAGCCT AGTAATGAATGAGTCACTTTACGAGAGGGAAGCTAATAGATTATTGGATGACTTAGGACC TCGTTATGTTGATTGGTGGTGGCCAAAGCCTTTGCCTGTGGATGCGGATTTACTTCCTGA AGTAGTTCCTGGATTTAAGCCACCATTTAGACTTTGCCCACCACGTTCAAGATCAAAGCT GACAGATGATGAACTTACACAATTAAGGAAACTTGCTCGTTCTTTGCCAACTCATTTTGT CCTTGGGAGAAACAGAAAACTGCAAGGCTTGGCAGCAGCACTCGTAAAGTTGTGGGAGAA ATGTCATATAGCAAAGATAGCTTTGAAGTGGGGAATTCCAAATGCTAGCAATGAGCTAAT GGCAAATGAGTTAAAGTATCTTACAGGAGGAGTCCTTTTATTGCGGAATAAGTTCTTTAT AATCCTATACAGAGGCAAGGATTTTCTTCCTTCTCAAGTTGCAAAACTTGTAGCTGAAAG GGAGGTGGAGCTCACAAGATGTCAGCTTGAGGAAGAAGTTGCACGATTCAAAGCAATTGA AACTCTTCCAATCACTATGGAAGCATCAATGAGCAGTAGTATTGTTGGGACTTTATCAGA ATTCCAGACAATTGCAGAACCTGGAAAGGAGAAATCTGAGGTTGAAGTTCAATTGATGTC TGAAAAGGAAAGATTAGAAAAAGAAGTGAGGAATCAACAGGACAGCCTTTACATTCTCAA GAAGAAGATTGAAAAATCATCTATAGCACTGGGAAAGCTAAATGCTGCCTGGAGACCTGC CAAAGAGGATGACGATAAAGAAATCTTAACACAGGAAGAAAGACGATCTCTTAGGCAGAT AGGATTAAAGATGGACAGGAGTTTAGTTCTTGGGAGACGTGGTGTTTTTGATGGTGTCTT AGCTGGTCTCCATCAGCATTGGAAGCACAGAGAAGTTATTAAGGTGATCACAATGCAGAA AATCTTTTCTCAGGTCATTCATACTGCAAAGCTCCTGGAGACAGAAAGTGGTGGAATACT GATTTCTGTTGACAAAATTAAAGAAGGCCATGCAATAATAATTTATCGGGGAAAGAACTA CAGACGCCCAGAGTTGGTTCCTCAAAATCTTCTAAACAAAAGACAAGCTTTATGTCGGTC CCTGGAAATGCAGAGACTTGGATCATTGAAGTTTTATGCAAATCAAACGGAGCAGGCAAT CTCTGATCTTAAGTTGAAATTGGTAGAATATACAGTAAAGATTGGTCAAATGGGGGAGAT CTAAAGCTTGTGGTGCAGTCATAACTACTATTGCTCTTGATTTCTGTCTTGACATGGTCT ACTTATATCAGCGCGAAGAGAATTCACCCATTAGCTAGGTGAGTTTAAGGTCATAAATCA AGGGCTCTCAAAGCAATAGTCCTTATTTCCCCATAATACTCACTTAGCTAGCATCTTGGG ATTTCACTTTTGGGATAATGTGCAACTTGGAGAAACATTAACTTTGTGATTCTCCTGATG AGACCAGAACAGTTCAGGATGGTGGTGGACTGCAGATGCAATGGATTGTTAGAGTAACAT TGCTAACATTACATAATAGACATATTTCAAAGGACTGATACTTGTTGCATGATCTGGAAA TATCTGTGGAAGCATTAAGTAGGCCCACCTCTATACTTGAAAGCAATAAAACAGACATTT GGAGGAGGGAGAAGATGAACATACTACAGGGATTTGTTCCATACAGCACGGAGTCGGTAA ACGTTAATTGCACTGCTGATTTTTAAGGACACTGTTCCTCCTCTCTTGCAGCAACTTTGT GATATTGTGCCAATTCCAGCTTTACGGAGAAGTGGCAAACTCACACTGCAGTAAAAGATG GTTCTGAGGCAGCATGGTGTTTCCAGGAGGATTCGTTGTTACCATTGTGATCAACGATCC AGAGTGTAGTGCACCTATGGCGTTATCCTTCATTTACCACAAGGCTACGACCATAGGTGT TAGTGTAATTAATCAAATCAAAGTGTGGTCAGGTTGTGCCTGCTCATTTATAGCAGGAGA TGATACATATATAATTTGGATGCTAGGGGTGGGTATTTTACATAGGCACAAGCATTGTAT GACAACAGCTAGATTACTTAAACGAGTTAGAATGTTTGGTCACTTGTCAGGCCACCACAA ATGTGAAATTTATGTGCTCTCTGTTTGGTACCAATTAACAATAATTTTATCAACCCATTA ATAGTCTGAAACCTAATCAGTGGTGATCAAATAATATTCCCACAATCCCACTAAATTGAC AACACTTTCGTTATAATATATTAACAAATTTGCATCAATTGTTTTTATGTGGAAGCGATA TTAGCTCCAGAAATGAACCTCCTTTCTGAGGTCATTGTGGATGTTGATGTAAGCGACTCT GGGATGGATCTTGTTGGAGAATTCAAGACAGGTTTTGGTGGAACTTGTAGGGATTGAAGG CTTCCTTCCAGCATTTCAACTGCCTTCTCTATAGCTGGTCGAT