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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g085740.3.1
CDS Infomation

Ribosome biogenesis ERB1 (AHRD V3.3 *** A0A0B0NU98_GOSAR)
Sequence

ATGAAACATTTACTCATCTCATTATTGATAATATCTGGTTTTAACCATTCATGTACGTTA
CAACTTACAACATTATTGATTATTCACCCCCAAACCAAAACCAATTCATTATTTACTTTA
CTATTGATAAAAGGAATTAGTTATGTTCTTCTTCTCCAAACACATGAACGTTGCCACAAA
AATCCAATTTGTCTGAAACTGAAACCCATTGTTCATCAGAAATTGACATTAACAATGGTA
GTTGAAGCTCATCAGCTTTTTCTTCCAAAACCCCCTTTCTCTTCTCCTTCTTTCCCTTCT
CCACCACCCCATTTTTCTTCTTTCCTTTTTCACCCTTCTTCTCTCTCTTTAGCTCTCTTC
CATTCCGATTCTTCTATCTCTCTCTACTCTTCTTTCTCTCCTTTCTCTATCGCTTCCTTT
CCTCCTCCCCAAACCACTCTCCATCCCCCCATCTCCGCCGCCGCTTTCCTCCTCCTACGG
AACCCTAATCCGATCACCCTCTTTCTCATCTCATCTCCTATTTACGGAGGCTCCGCAGTT
CTCTTCCGTTTCTATATCCTTAATTCTGCTAGGAAGTCTTTTACTCCGGCCAAAGTTGTA
TGTAATCACACTGATTTCAAGTTTGATGAGAGTAAATTCGGGGTGGTTTTTGGGGTTTCT
CATGGGGTTTCCCTGAAATTGGTTGCCGATGTTAATGTATTTGCGTTGTACTCTATTTCG
AATAGTAGAGTTTGGGTTTTTGCTGTGAAACACCTGGGGGGTGAGGAGCTGAAATTAATG
AAGTATGCCGTGATTGATTGTTCTCTGCCCGTGTTTTCCATTAGTGTATCTTTTGGGGTC
CTGATTTTGGGGGAAGATAATGGAGTCAGGGTTTTCCCCCTGCGGCCATTGGTCAAAGGA
AGAGTTAAGAAAGAGAGGGCTACCAATAAGAAAAGTTTGAATGGTGGGTTAGAAAAAGAT
AAAATGGAGATAAAAAAGCTACCTTTACGAAATGGGATGATACATGGCATGAATGCTGAG
ATTAGTGCTGCTGATGGTAGTAAATTGATGGAACTGAAGTTTACTTCCAATGGTATGGTC
GAGAACCGCACTGAATCAGCAAAGTTAAGGTCTGTGAGACTCAGACAAGATTCCAGAGAG
GGTATTGCAAACTTCGTGGCATTCAAGAACAAGGATGATAATTTTGAGTCGATCAAGATA
CCGGTTAAGTCAGCAAAAGCTATTGGCATTCAGGCCTTATCTTCAACCAGGTTTCTGATC
TTGGACTCTGAAGGAAATCTTCACCTCTTGTTCCCTGCAACTTCTGTTCATGGATCAGAG
ACTCCTTATAGCATGAAACAGTTAACTCACAACATGAAAGTTCGAAAGCTCACTGTTCTT
CCGGATTCTTCTACAAGAACACAAACTGTTTGGACAACAGATGCACTTCATACTGTACAC
ATGATTGCGGTGACTGACATGGATGCATCTTCTGTCAATAAAACTGACAGCAAGGATCCT
GCAGAGAAGCTTGTACAGACTTCAGTTGTGCAAGCAATATTTTCCAGTGAAAAGGTCCAA
GAAATTGCAGCTTTGTCTGCGAATACAATATTGCTTCTTGGACAAGGAAGCATGTTTGCA
TATGCAATTTCCTAG

Peptide Sequence

PEP ID

Solyc02g085740.3.1
PEP Infomation

Ribosome biogenesis ERB1 (AHRD V3.3 *** A0A0B0NU98_GOSAR)
Sequence

MKHLLISLLIISGFNHSCTLQLTTLLIIHPQTKTNSLFTLLLIKGISYVLLLQTHERCHK
NPICLKLKPIVHQKLTLTMVVEAHQLFLPKPPFSSPSFPSPPPHFSSFLFHPSSLSLALF
HSDSSISLYSSFSPFSIASFPPPQTTLHPPISAAAFLLLRNPNPITLFLISSPIYGGSAV
LFRFYILNSARKSFTPAKVVCNHTDFKFDESKFGVVFGVSHGVSLKLVADVNVFALYSIS
NSRVWVFAVKHLGGEELKLMKYAVIDCSLPVFSISVSFGVLILGEDNGVRVFPLRPLVKG
RVKKERATNKKSLNGGLEKDKMEIKKLPLRNGMIHGMNAEISAADGSKLMELKFTSNGMV
ENRTESAKLRSVRLRQDSREGIANFVAFKNKDDNFESIKIPVKSAKAIGIQALSSTRFLI
LDSEGNLHLLFPATSVHGSETPYSMKQLTHNMKVRKLTVLPDSSTRTQTVWTTDALHTVH
MIAVTDMDASSVNKTDSKDPAEKLVQTSVVQAIFSSEKVQEIAALSANTILLLGQGSMFA
YAIS*

Transcript Sequence

Transcript ID

Solyc02g085740.3.1
Transcript Infomation

Ribosome biogenesis ERB1 (AHRD V3.3 *** A0A0B0NU98_GOSAR)
Sequence

ATTAAAAAGTATAAAATTAACAGTGAACAAGTACATCGGACACAGAGTACTATTCAATAT
GAAACATTTACTCATCTCATTATTGATAATATCTGGTTTTAACCATTCATGTACGTTACA
ACTTACAACATTATTGATTATTCACCCCCAAACCAAAACCAATTCATTATTTACTTTACT
ATTGATAAAAGGAATTAGTTATGTTCTTCTTCTCCAAACACATGAACGTTGCCACAAAAA
TCCAATTTGTCTGAAACTGAAACCCATTGTTCATCAGAAATTGACATTAACAATGGTAGT
TGAAGCTCATCAGCTTTTTCTTCCAAAACCCCCTTTCTCTTCTCCTTCTTTCCCTTCTCC
ACCACCCCATTTTTCTTCTTTCCTTTTTCACCCTTCTTCTCTCTCTTTAGCTCTCTTCCA
TTCCGATTCTTCTATCTCTCTCTACTCTTCTTTCTCTCCTTTCTCTATCGCTTCCTTTCC
TCCTCCCCAAACCACTCTCCATCCCCCCATCTCCGCCGCCGCTTTCCTCCTCCTACGGAA
CCCTAATCCGATCACCCTCTTTCTCATCTCATCTCCTATTTACGGAGGCTCCGCAGTTCT
CTTCCGTTTCTATATCCTTAATTCTGCTAGGAAGTCTTTTACTCCGGCCAAAGTTGTATG
TAATCACACTGATTTCAAGTTTGATGAGAGTAAATTCGGGGTGGTTTTTGGGGTTTCTCA
TGGGGTTTCCCTGAAATTGGTTGCCGATGTTAATGTATTTGCGTTGTACTCTATTTCGAA
TAGTAGAGTTTGGGTTTTTGCTGTGAAACACCTGGGGGGTGAGGAGCTGAAATTAATGAA
GTATGCCGTGATTGATTGTTCTCTGCCCGTGTTTTCCATTAGTGTATCTTTTGGGGTCCT
GATTTTGGGGGAAGATAATGGAGTCAGGGTTTTCCCCCTGCGGCCATTGGTCAAAGGAAG
AGTTAAGAAAGAGAGGGCTACCAATAAGAAAAGTTTGAATGGTGGGTTAGAAAAAGATAA
AATGGAGATAAAAAAGCTACCTTTACGAAATGGGATGATACATGGCATGAATGCTGAGAT
TAGTGCTGCTGATGGTAGTAAATTGATGGAACTGAAGTTTACTTCCAATGGTATGGTCGA
GAACCGCACTGAATCAGCAAAGTTAAGGTCTGTGAGACTCAGACAAGATTCCAGAGAGGG
TATTGCAAACTTCGTGGCATTCAAGAACAAGGATGATAATTTTGAGTCGATCAAGATACC
GGTTAAGTCAGCAAAAGCTATTGGCATTCAGGCCTTATCTTCAACCAGGTTTCTGATCTT
GGACTCTGAAGGAAATCTTCACCTCTTGTTCCCTGCAACTTCTGTTCATGGATCAGAGAC
TCCTTATAGCATGAAACAGTTAACTCACAACATGAAAGTTCGAAAGCTCACTGTTCTTCC
GGATTCTTCTACAAGAACACAAACTGTTTGGACAACAGATGCACTTCATACTGTACACAT
GATTGCGGTGACTGACATGGATGCATCTTCTGTCAATAAAACTGACAGCAAGGATCCTGC
AGAGAAGCTTGTACAGACTTCAGTTGTGCAAGCAATATTTTCCAGTGAAAAGGTCCAAGA
AATTGCAGCTTTGTCTGCGAATACAATATTGCTTCTTGGACAAGGAAGCATGTTTGCATA
TGCAATTTCCTAG