Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g085700.1.1
CDS Infomation

geranylgeranyl pyrophosphate synthetase
Sequence

ATGAGTCTTTCAACAACAATTACAACTTGGGGATACACCCATCATCCCTTTTCTGACGTT
GGAAATAAAGGCAGATCCAGATTTCGCTCTCCAGGATTCATGCCTCATCTGAAGATGAAA
TTCTTCACTAACCCTTCTTCTCTTTCTGTCTCAGCTCTTCTTACAAAGGAGCAAGAAAGC
AAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCTGTTTCTGTC
AACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCATGATTCATGAGTCCATG
AGGTACTCTCTTCTTGCTGGTGGGAAAAGAATTAGACCCATGTTGTGTATAGCTGCTTGT
GAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTTGAAATGATT
CACACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGATCTTAGAAGA
GGGAAACCTACAAATCACAAGATTTATGGGGAGGATGTGGCTGTTTTAGCAGGGGATGCA
CTTCTTGCATTAGCCTTTGAGCACATTGCTACTCATACAAAAGGGGTTTCTTCTGATAGA
ATTGTGAGGGTGATTGGTGAGTTGGCGAAGTGTATTGGGGCAGAGGGACTTGTAGCTGGT
CAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTAGAGTTC
ATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCTATATTA
GGAGGTGCACCAGATGAAGATGTGGAAAAGCTAAGAAAATTTGCAAGATGTATTGGTTTG
TTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTGGGGAAA
ACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGTATTGAG
AAATCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCGAAAGCTCAGCTTGTTGGATTT
GATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAAATTATATTGCTTACAGAGAGAAT
TAA

Peptide Sequence

PEP ID

Solyc02g085700.1.1
PEP Infomation

geranylgeranyl pyrophosphate synthetase
Sequence

MSLSTTITTWGYTHHPFSDVGNKGRSRFRSPGFMPHLKMKFFTNPSSLSVSALLTKEQES
KSKKQAMEFKEYVLEKAVSVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC
ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA
LLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEF
IHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGK
TAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIAYREN
*

Transcript Sequence

Transcript ID

Solyc02g085700.1.1
Transcript Infomation

geranylgeranyl pyrophosphate synthetase
Sequence

ATGAGTCTTTCAACAACAATTACAACTTGGGGATACACCCATCATCCCTTTTCTGACGTT
GGAAATAAAGGCAGATCCAGATTTCGCTCTCCAGGATTCATGCCTCATCTGAAGATGAAA
TTCTTCACTAACCCTTCTTCTCTTTCTGTCTCAGCTCTTCTTACAAAGGAGCAAGAAAGC
AAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCTGTTTCTGTC
AACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCATGATTCATGAGTCCATG
AGGTACTCTCTTCTTGCTGGTGGGAAAAGAATTAGACCCATGTTGTGTATAGCTGCTTGT
GAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTTGAAATGATT
CACACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGATCTTAGAAGA
GGGAAACCTACAAATCACAAGATTTATGGGGAGGATGTGGCTGTTTTAGCAGGGGATGCA
CTTCTTGCATTAGCCTTTGAGCACATTGCTACTCATACAAAAGGGGTTTCTTCTGATAGA
ATTGTGAGGGTGATTGGTGAGTTGGCGAAGTGTATTGGGGCAGAGGGACTTGTAGCTGGT
CAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTAGAGTTC
ATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCTATATTA
GGAGGTGCACCAGATGAAGATGTGGAAAAGCTAAGAAAATTTGCAAGATGTATTGGTTTG
TTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTGGGGAAA
ACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGTATTGAG
AAATCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCGAAAGCTCAGCTTGTTGGATTT
GATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAAATTATATTGCTTACAGAGAGAAT
TAA