Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g085560.3.1
CDS Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B2RSA7_GLYSO)
Sequence	ATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCC AAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCA GAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTG AAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAAC GATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGT GAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGTTCTATGTACTCCAATATCCGTTG AGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGGTTGAGACCT TCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGA GACTCTGTACATGCAGCAACAATAAAAAAACAGATTGTTTCTACAAAATGGGTGCCATCA TCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGTTCCACCTCAATCCT GTTCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAG AACCTTACCACCAGCAATGATGAAAAAAGTTGTGAAAACGAAGACGTCAAGGAGAAAAAG CCTGTGGGTCTGTCAAAGAAGCAGAACAAACTACCTGGGAACTACAAGGATATTGGAGAG CATTGGTTACATCTAAAATACCATGGGACTAGGAGTGACATTTCAGCCAGACATCTTCAA AAAATGGCTATGGAGGGAGGCTCCCCAGTACCATTTTCAATGATCCCGAGTGATTATCTG AATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAGG TTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAGGGACCTCCAATT CATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAA GTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTC TATGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACC AAGAGTACTTTAATTAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCG ACACCAGTTCTAAAATCATTAGCTGTTGAGAGGCCTGACCTGGATGATTGGAAGCTCAAA GAGCTTCCTGACAAGAAATTCGAAAACCTCTATGGTGATGTTGTAAGAGAGCAGGAAGCT ATCTGGGAGTCCATGGGGAAACAGATCAATGATATTATGCATGGAGGAAGAAACAGGCCT ACTTTGAAGAATCCTCTAAACCCAAAGGCCAACATTCCTGCGTTGTCAAGTAGTGATAAG CCCACTCCTACGACATTTTTGAGAACATCTCTGTCAGAAGAAATTCGTGGAGCTTTACCT AAGGCGCTTCAAAATGTTTTTAGAATCCATAAGGTTTGCAGTTTGCTTCAAATTTGCGAA CTGATGGAAAAGGAAGATCCAATGAAAGCTATAATTTCACCCGCGGGTATTTCTGATGCA CTTCGAAAGGAGATAGAGGCAGTGGTTAATCAGATTGCTGTAAACATCCACGGTGTCTAT GTTTTGAAGTCATCGCCAGATAATCCACAGTATGATGCATTGAGGAAAGTTGTAATTGAT CTTTTTATGGCCGAAGGGTCGAATGCAAAGCTAAAGAAAGCATCTATAGTTGAAGCTGCC AAGTTGCAACTGGGAAGGGATGTCACCACTGTGGAGTTTCAAAAGGTTATGAAGGAACTA TGTCGTTCAGAAAACTCAGCATGGGTTTTGGGAATCAGTGACAGCAATCCACAACAGTAG

Peptide Sequence

PEP ID	Solyc02g085560.3.1
PEP Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B2RSA7_GLYSO)
Sequence	MDLDFDGPSKVPSRQARFAPKNSKLKPQPKSETLPLKVDSEIPTKKEEFVSQPPLRDHIV KNGEAKVEDDVLLNGETTGNDLAEEQVGMETDSDQDEVVREVDVWLTPSANEFYVLQYPL RSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNFDRDSVHAATIKKQIVSTKWVPS STCADFAVGIFIGDKFHLNPVHAIVQLRPSLQHRKESELKNLTTSNDEKSCENEDVKEKK PVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAMEGGSPVPFSMIPSDYL NAICPARPTDIDRLRNLRTRLSQKPFEERVRTWLLEGPPIHRFDTLKHLAPDNPVDEILE VLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAA TPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRP TLKNPLNPKANIPALSSSDKPTPTTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQICE LMEKEDPMKAIISPAGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVID LFMAEGSNAKLKKASIVEAAKLQLGRDVTTVEFQKVMKELCRSENSAWVLGISDSNPQQ*

Transcript Sequence

Transcript ID	Solyc02g085560.3.1
Transcript Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B2RSA7_GLYSO)
Sequence	AATATAATCATGTCCCTTATTAAATAGTTCATTTAACCTCTGCTCTTGTTTAATCAGACG GTAAAACAGACCCACAGAACTGTTAAAGCGTCAGCTCCAACTAATAAACCCTAAACCCTT CCTCCACCATTGTTACTTGGAGTTGAAGTTTCACTTTTCCATCCAGAAAATTGCAGTGAT GGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAA GAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGA GATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAA AAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGA TCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGA AGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGTTCTATGTACTCCAATATCCGTTGAG GTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGGTTGAGACCTTC ATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGA CTCTGTACATGCAGCAACAATAAAAAAACAGATTGTTTCTACAAAATGGGTGCCATCATC TACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGTTCCACCTCAATCCTGT TCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAA CCTTACCACCAGCAATGATGAAAAAAGTTGTGAAAACGAAGACGTCAAGGAGAAAAAGCC TGTGGGTCTGTCAAAGAAGCAGAACAAACTACCTGGGAACTACAAGGATATTGGAGAGCA TTGGTTACATCTAAAATACCATGGGACTAGGAGTGACATTTCAGCCAGACATCTTCAAAA AATGGCTATGGAGGGAGGCTCCCCAGTACCATTTTCAATGATCCCGAGTGATTATCTGAA TGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAGGTT GTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAGGGACCTCCAATTCA TCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGT TCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTCTA TGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAA GAGTACTTTAATTAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCGAC ACCAGTTCTAAAATCATTAGCTGTTGAGAGGCCTGACCTGGATGATTGGAAGCTCAAAGA GCTTCCTGACAAGAAATTCGAAAACCTCTATGGTGATGTTGTAAGAGAGCAGGAAGCTAT CTGGGAGTCCATGGGGAAACAGATCAATGATATTATGCATGGAGGAAGAAACAGGCCTAC TTTGAAGAATCCTCTAAACCCAAAGGCCAACATTCCTGCGTTGTCAAGTAGTGATAAGCC CACTCCTACGACATTTTTGAGAACATCTCTGTCAGAAGAAATTCGTGGAGCTTTACCTAA GGCGCTTCAAAATGTTTTTAGAATCCATAAGGTTTGCAGTTTGCTTCAAATTTGCGAACT GATGGAAAAGGAAGATCCAATGAAAGCTATAATTTCACCCGCGGGTATTTCTGATGCACT TCGAAAGGAGATAGAGGCAGTGGTTAATCAGATTGCTGTAAACATCCACGGTGTCTATGT TTTGAAGTCATCGCCAGATAATCCACAGTATGATGCATTGAGGAAAGTTGTAATTGATCT TTTTATGGCCGAAGGGTCGAATGCAAAGCTAAAGAAAGCATCTATAGTTGAAGCTGCCAA GTTGCAACTGGGAAGGGATGTCACCACTGTGGAGTTTCAAAAGGTTATGAAGGAACTATG TCGTTCAGAAAACTCAGCATGGGTTTTGGGAATCAGTGACAGCAATCCACAACAGTAGTC TGCTATTTTTGATTAAGTCGTACAGGTCATGGGAAGTTCACTGCTAGCTGCAGAAATTCT CAATGCTGAGGAGAAGTTGGCTTTTCTTGAAGTTCCACTTTACTCTTGAGAGTCATAATT GTTCAGTTTTGAGGTTAACACGGAGTCTCGCGTATATGGTTGAGCTGTTGATACGCTTCG CGGTGCATTTGCAAATCTGGGAGAAAATTTAGTTAGGATTAGCAGATGTCAAGCCTTTTT TGCTCATTCTTTTATCATTCAATTTATTCTTTTCATGAACGAAAATATAGTCAGATGTTT CTTTTCAATGTCTTGAATATCTCTGTTAAAATGTATGAATTGTTGCATCTCTTTACTTGC AGAAGAAAATCATTCAGCATATTTGTACCATCAGAAGAAAAATACAAGTTAAAAAGTTTG CCGTTC