Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g085220.3.1
CDS Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	ATGGTGCACACTGCCTACGATACCTTCCAACTCCTCAATAATTCTCCCTCCAAAATCGAT GCCATTGAATCATACCGCTCAAATTTGCTCATCGCATGTTCCGATGGATCGCTCCGTGTT TACGTTCCAGAATCCTCAGTTTCCGATCAATCTGATTTCCATTCCGAAACCTTAGGGCTT CATCAAGGACCATATGTGCTTGAAAGAACTCTGAATGGATTCTCCAGAAGACAAATGCTG GCCATGGAAGTCCTCGTCTCACGAGAACTTCTGCTTTCCCTCTCCGAGTCAATTGCGTTA CATCGATTGCCTGATTTGGAGACTTTATCAGTGATTACTAAGGCTAAAGGTGCAAATGTA TATTCGTGGGATGATAAACGAGGGTTACTTTGCTTCGGCAGGCAAAAAAGAGTCTGTATT TACAAACACGACGGGGGGAGTGGATTTGTGGAGGTGAAAGAATTTGGAGTACCTGACACA GTTAAGTCGATGTCATGGTGTGGTGAGAATATTTGCTTGGGGATTAGAAGAGAGTACAAG ATATTGAATACCACTAATGGTGTATTGTCTGAGGTGTTCTCTTCAGGGAGGATCGCCGCA CCTCTTGTGGTGGCTCTTCCACCCGGAGAACTACTTTTGGGCAAGGATAATATTGGTATC TTAGTTAACCAAAACGGGAAGTTGATCCAAGAAGGGAGGATTTGTTGGTCTGAGGCTCCT GCAGCTGTTATTATCCAGAAGCCGTATGCAATAGGTCTTTTGGGGCGACATGTTGAGATA CGTTCTCTTCGTGTACCTTATCCTTTGATTCAAACAGTTGTCCTTCGGAATGTTCGTCAT CTTGTTCAAAGCAACAATACTGTGATTGTTGCTCTTGATTATTCTGTTTTTGGATTTTTT GCTGTACCTCTTGGTGCGCAGATTGTACAACTAACAGCATCTGGAAACTTTGAGGAGGCC TTGGCTTTGTGCAAATTGCTACCACCAGAAGATTCCAGTCTTAGATCTTCAAAGGAGCAG TCAATTCATATGAGATATGCGCACTTTCTATTTGAAAATGGGAGCTATGAAGAAGCAATG GAACATTTTCTGGCATCTCAAGTTGAAATCACTTATGTGCTCGCCTTATATCCATCCATT ATTGTTCCAAAATCATCTTGCATACCTGAACCACAGAAATTTGCAGATGTTGCAGATGCA CCATATCTCTCCCGAGGCTCTTCTGGTCTGTCAGATGATCTAGATTCTCCGTCTTCGGAT GTATTTGAATCTGATGAAATGGATATAGAGTCCAAGAAAATGAGCCACAACACTTTGATG GCTCTGATTAAGTATTTGCAGAAAAAGAGATACAGTGTCATTGAGAAAGCAACAACTGAG GGAACTGAAGAAGTGGTTTCAGATGCTGTTGGAGATAATTTCATTTCTTATGGAACTGAC CGGTCCAAAAAACCAACCAAGGGCAGAATTCATATTCCTATCACTTCCATCGCTAGGGAC ATGGCTGCAATACTGGACACTGCACTTCTTCAAGCTCTGTTTTTAACTGGACAGTCCTCT GCTGCTACAAATTTTCTGAAAGTCCTCAACTACTGTGATGTGAAAATATGCGATGCGTTC CTGCAAGAGAGAAGCCAGTATGCTTGTCAGGTAGAACTTTATAGATGCAATTCAATGCAT CATGAAGCACTGAAACTTCTTCATCAACTGGTAGAAGAGTCCAAGTCAGAGCAAACTCCT GTAGAGCTCTTAACGAAGTTCAAGCCTGATATGATCATTGAATATCTCAAACCCCTTTGT GCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATG CAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTA AAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAA AATAGTATCTCAGGGAATCTGCAGAATGAAATGGTGCAAATTTATCTCTCAGAAGTGCTT GATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCTCCACCA AGGAAAAAGCTACTGTCTGCTTTGGAGGGTATGTCTGGATATACTCCAGAGGTGTTGCTG AAGAGACTTCCACCAGATGCTCTGTATGAAGAACGTGCAATTCTTTTGGGGAAAATGAAT AAACATGAACTTGCCCTGTCTATTTATGTGCACAAGGATTGGCTTTTATCTAATGCATTG GTGCTTTCGAGGGTATTTAAGCTTCATGCTCCCGAACTTGCACTGTCCTATTGTGACCGG GTGTACGATTCAGGACTTCAACAACATTCAGCAAAATCTTACGGAAACATTTACCTGACT CTACTGCAAATCTATCTAAATCCTAGGAAGACAACAAAAAAATTTGAGAAGAAAATTACT AATCTGGTATCAGCTCAGAGCCCTAGGATTCCAAAAGTTGGTTTAGGAACTACAGGAAAG GTAAAAGGAGGCCGCTCCAAGAAAATTGCTGAAATTGGGGGCGCTGAGGACACTCGATTC AGTCTAAGCGGCACAGACAGTGGTAGGAGTGATGGAGATACAGAAGATGCTGCCGAGGAA GGTGGTTCTACTATTATGCTAGATCAGGTACTTGATCTTTTGAGCAGAAGGTGGGATCGA ATCCATGGTGCCCAAGCGCTGAAACTGCTTCCAAGGGATACTAAGCTACAGAACTTGCTT CCATTTCTTGGACCTCTTCTGAGGAAATCCAGTGAAGCATATCGGAACTTCTCAGTGATA AAAAGCTTGAGAGAGTGTGAAAACCTACAGATTCCATATCCAAAATGCTCTGAAGGAACC TTCGATATCCTACCCCACGTGGAACCTGCCCTAAGAACAGTTTTCGAGAAAAAAACTGGT CATTCTGATGCATACAACAGTTTATATGTGGTCATTTGGGTTAAAGATGAACTGTATAAC CAAAGAAAAGCAGTTTTGAAGATCACAAGCGATAGCATGTGCTCTCTTTGCAATAAGAGG ATTGGCACCAGTGTCTTTGCAGTCTATCCTAATGGTAAGACAATTGTGCACTTTGTCTGC TTTAGAGATTCACAGAATATGAAGGCAGTTGGAAGAGGCTCTCAGTTGAGGAAAAGATGA

Peptide Sequence

PEP ID	Solyc02g085220.3.1
PEP Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	MVHTAYDTFQLLNNSPSKIDAIESYRSNLLIACSDGSLRVYVPESSVSDQSDFHSETLGL HQGPYVLERTLNGFSRRQMLAMEVLVSRELLLSLSESIALHRLPDLETLSVITKAKGANV YSWDDKRGLLCFGRQKRVCIYKHDGGSGFVEVKEFGVPDTVKSMSWCGENICLGIRREYK ILNTTNGVLSEVFSSGRIAAPLVVALPPGELLLGKDNIGILVNQNGKLIQEGRICWSEAP AAVIIQKPYAIGLLGRHVEIRSLRVPYPLIQTVVLRNVRHLVQSNNTVIVALDYSVFGFF AVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRSSKEQSIHMRYAHFLFENGSYEEAM EHFLASQVEITYVLALYPSIIVPKSSCIPEPQKFADVADAPYLSRGSSGLSDDLDSPSSD VFESDEMDIESKKMSHNTLMALIKYLQKKRYSVIEKATTEGTEEVVSDAVGDNFISYGTD RSKKPTKGRIHIPITSIARDMAAILDTALLQALFLTGQSSAATNFLKVLNYCDVKICDAF LQERSQYACQVELYRCNSMHHEALKLLHQLVEESKSEQTPVELLTKFKPDMIIEYLKPLC ATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPDMQATYLELMLAMNE NSISGNLQNEMVQIYLSEVLDFHAEHNSQQKWDEKTCPPPRKKLLSALEGMSGYTPEVLL KRLPPDALYEERAILLGKMNKHELALSIYVHKDWLLSNALVLSRVFKLHAPELALSYCDR VYDSGLQQHSAKSYGNIYLTLLQIYLNPRKTTKKFEKKITNLVSAQSPRIPKVGLGTTGK VKGGRSKKIAEIGGAEDTRFSLSGTDSGRSDGDTEDAAEEGGSTIMLDQVLDLLSRRWDR IHGAQALKLLPRDTKLQNLLPFLGPLLRKSSEAYRNFSVIKSLRECENLQIPYPKCSEGT FDILPHVEPALRTVFEKKTGHSDAYNSLYVVIWVKDELYNQRKAVLKITSDSMCSLCNKR IGTSVFAVYPNGKTIVHFVCFRDSQNMKAVGRGSQLRKR*

Transcript Sequence

Transcript ID	Solyc02g085220.3.1
Transcript Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	GTACCCATTAAAACCCCATAAAAAAAAGAATGTAAAAAAAACTAAATAGTTATTACTCTC TTCATTTCAATCTATTTGTTGTTAAATCTATTTTTTTTTTTATAGCTTTTCTAGTTTCAA TCTGAACGCAAATCAAAATATTTTAATATCAAATAAAAACCCAATAAACAAAGTAAAAAA GGAAGGGAGGAGTGTGGAAAATAGGCAAAGTTTATGAACAAATTCCCAAAAGAGCGGGAC AAAGCATTAACATGCTAATAATACGCATGTAGATTGTGGAACAGAGAGGTTATTTTGACA TGCTACCCAAATCAATCAGGGAAGAAGAAAGATGGTGCACACTGCCTACGATACCTTCCA ACTCCTCAATAATTCTCCCTCCAAAATCGATGCCATTGAATCATACCGCTCAAATTTGCT CATCGCATGTTCCGATGGATCGCTCCGTGTTTACGTTCCAGAATCCTCAGTTTCCGATCA ATCTGATTTCCATTCCGAAACCTTAGGGCTTCATCAAGGACCATATGTGCTTGAAAGAAC TCTGAATGGATTCTCCAGAAGACAAATGCTGGCCATGGAAGTCCTCGTCTCACGAGAACT TCTGCTTTCCCTCTCCGAGTCAATTGCGTTACATCGATTGCCTGATTTGGAGACTTTATC AGTGATTACTAAGGCTAAAGGTGCAAATGTATATTCGTGGGATGATAAACGAGGGTTACT TTGCTTCGGCAGGCAAAAAAGAGTCTGTATTTACAAACACGACGGGGGGAGTGGATTTGT GGAGGTGAAAGAATTTGGAGTACCTGACACAGTTAAGTCGATGTCATGGTGTGGTGAGAA TATTTGCTTGGGGATTAGAAGAGAGTACAAGATATTGAATACCACTAATGGTGTATTGTC TGAGGTGTTCTCTTCAGGGAGGATCGCCGCACCTCTTGTGGTGGCTCTTCCACCCGGAGA ACTACTTTTGGGCAAGGATAATATTGGTATCTTAGTTAACCAAAACGGGAAGTTGATCCA AGAAGGGAGGATTTGTTGGTCTGAGGCTCCTGCAGCTGTTATTATCCAGAAGCCGTATGC AATAGGTCTTTTGGGGCGACATGTTGAGATACGTTCTCTTCGTGTACCTTATCCTTTGAT TCAAACAGTTGTCCTTCGGAATGTTCGTCATCTTGTTCAAAGCAACAATACTGTGATTGT TGCTCTTGATTATTCTGTTTTTGGATTTTTTGCTGTACCTCTTGGTGCGCAGATTGTACA ACTAACAGCATCTGGAAACTTTGAGGAGGCCTTGGCTTTGTGCAAATTGCTACCACCAGA AGATTCCAGTCTTAGATCTTCAAAGGAGCAGTCAATTCATATGAGATATGCGCACTTTCT ATTTGAAAATGGGAGCTATGAAGAAGCAATGGAACATTTTCTGGCATCTCAAGTTGAAAT CACTTATGTGCTCGCCTTATATCCATCCATTATTGTTCCAAAATCATCTTGCATACCTGA ACCACAGAAATTTGCAGATGTTGCAGATGCACCATATCTCTCCCGAGGCTCTTCTGGTCT GTCAGATGATCTAGATTCTCCGTCTTCGGATGTATTTGAATCTGATGAAATGGATATAGA GTCCAAGAAAATGAGCCACAACACTTTGATGGCTCTGATTAAGTATTTGCAGAAAAAGAG ATACAGTGTCATTGAGAAAGCAACAACTGAGGGAACTGAAGAAGTGGTTTCAGATGCTGT TGGAGATAATTTCATTTCTTATGGAACTGACCGGTCCAAAAAACCAACCAAGGGCAGAAT TCATATTCCTATCACTTCCATCGCTAGGGACATGGCTGCAATACTGGACACTGCACTTCT TCAAGCTCTGTTTTTAACTGGACAGTCCTCTGCTGCTACAAATTTTCTGAAAGTCCTCAA CTACTGTGATGTGAAAATATGCGATGCGTTCCTGCAAGAGAGAAGCCAGTATGCTTGTCA GGTAGAACTTTATAGATGCAATTCAATGCATCATGAAGCACTGAAACTTCTTCATCAACT GGTAGAAGAGTCCAAGTCAGAGCAAACTCCTGTAGAGCTCTTAACGAAGTTCAAGCCTGA TATGATCATTGAATATCTCAAACCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTT CTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAA CATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAAC ATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGA AATGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCA AAAGTGGGATGAGAAAACATGTCCTCCACCAAGGAAAAAGCTACTGTCTGCTTTGGAGGG TATGTCTGGATATACTCCAGAGGTGTTGCTGAAGAGACTTCCACCAGATGCTCTGTATGA AGAACGTGCAATTCTTTTGGGGAAAATGAATAAACATGAACTTGCCCTGTCTATTTATGT GCACAAGGATTGGCTTTTATCTAATGCATTGGTGCTTTCGAGGGTATTTAAGCTTCATGC TCCCGAACTTGCACTGTCCTATTGTGACCGGGTGTACGATTCAGGACTTCAACAACATTC AGCAAAATCTTACGGAAACATTTACCTGACTCTACTGCAAATCTATCTAAATCCTAGGAA GACAACAAAAAAATTTGAGAAGAAAATTACTAATCTGGTATCAGCTCAGAGCCCTAGGAT TCCAAAAGTTGGTTTAGGAACTACAGGAAAGGTAAAAGGAGGCCGCTCCAAGAAAATTGC TGAAATTGGGGGCGCTGAGGACACTCGATTCAGTCTAAGCGGCACAGACAGTGGTAGGAG TGATGGAGATACAGAAGATGCTGCCGAGGAAGGTGGTTCTACTATTATGCTAGATCAGGT ACTTGATCTTTTGAGCAGAAGGTGGGATCGAATCCATGGTGCCCAAGCGCTGAAACTGCT TCCAAGGGATACTAAGCTACAGAACTTGCTTCCATTTCTTGGACCTCTTCTGAGGAAATC CAGTGAAGCATATCGGAACTTCTCAGTGATAAAAAGCTTGAGAGAGTGTGAAAACCTACA GATTCCATATCCAAAATGCTCTGAAGGAACCTTCGATATCCTACCCCACGTGGAACCTGC CCTAAGAACAGTTTTCGAGAAAAAAACTGGTCATTCTGATGCATACAACAGTTTATATGT GGTCATTTGGGTTAAAGATGAACTGTATAACCAAAGAAAAGCAGTTTTGAAGATCACAAG CGATAGCATGTGCTCTCTTTGCAATAAGAGGATTGGCACCAGTGTCTTTGCAGTCTATCC TAATGGTAAGACAATTGTGCACTTTGTCTGCTTTAGAGATTCACAGAATATGAAGGCAGT TGGAAGAGGCTCTCAGTTGAGGAAAAGATGATAATGAGAAGTTGGATTTGGGATTAACTG AATGTTTTGGGTTGCTATTGGTGGCATTGATCCCATTTCTTCATGCTAGCACCATTTAAC ATGTTCTGCAGCTCAGTTTTAAGTTGCCATTTATCCTGAAAGTAAGACACTTCTGCTCTC AAGTCACAAGGGCTGCAATGGGTTGCAAATGGTACAAGTGTGCAAGCCTAGAATGACAGT GCTCCTCAAGAAGTAACAAGTTATACACATTTTTTTTGCAGATTATGGCCAATGTAGAAG CGAATACAATTGATTTGATGTTGTGTATTTTTTCTGTATTAAAATGGATGAGAGCTCTTA ACTTGAGGTGTTTATAACTTAATTTTGAGTAGAGTTTTGTTACAACTCAAGGTTGTGAAT GTTCAATTAAAATGCAATAATACACAACTTTCTTTGTTGATTGTATTTCCACGTAAAGCA AATACAGTAGTTTTTTACTTCTTTGTTGGGCTAACCCCATCCCCATTGTTATACATGACA TGACAATAAGATTCAGACTGACATCCCACCAACATCTAGCCTTGATTGACTATAGTGGCT ATCTTTTCCCGGTGAAAAGGTATACAACCACCCCAATCCTAGACCCATCGGGCGGAGGCT CGGTATGTATGATTTGGACATCAAAAAGCTTCTTGGCTCTCTTGAAGAAAGCAGATTCCT TCTTCCATCTTCTCAAATGAGCCATAACAAAAGCTATCTTCTTTCCACCTCCTAACAGGA AGAACCTCAACGTGTTAATCAGAGGATCATAGAGGTGATCATGGTACACCACATCAGATC CCAAAATCAGGTCATAATCTCTACCAACAGCCTCCATATGCTGGTTATCCCCCCAGCTAA GCGCCGCAACATCAACACCCCCACTCTGTTGTTCCAAAACTTGTGAGTTTGCATCAACAT TGAACTGTATATTAGGCAGCACATGAGGAAGGTCAGTGACAGTAACCTTAGCACCAAGAA TAGCAGCAGCAGCTATCCCAACAACACCTGTTCCTGAACCCAGTTCGAGAATACGAAGGG GTAGCGAAACCCCTTTTTCCTGACGTTTGAACAAATCGGAAAACGGAGTTGATTCGCCGT TACGAGTGTTATCAAGGAGAGTGACGAGAATAGTAGCGGCAGGCCAGAGTTGGAAAGAAA GGCCTTCAGATGGAAGTTGTCTGATGACTACGTTTGAGTTAATGGATTGGAGGAAATGGA GTTGCTGTTTTTGCTGCTGCGGAGAGGCGTCATTGTCATGGCCATCTTGTGGGAGAATCA TAGTGAACGGATTGAGGTCGTCCGTGTCAATGTCTCCTTTGATTTCGACAATTGGAGAAG TCATGTGACAGGCGGCGGCGATTCCGGGGTTCTTGAGGGGTTTATCCGACCCAGTCTGCG GAGTCTTGCCCTAACAACAAA