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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g085130.3.1
CDS Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4BB27_SOLLC)
Sequence

ATGTCTTTGAAGAGCATTGTTCGTGAGCTGAGGGAGATGAAAGATGGTATAGGGAATATA
TCAAGGAGGGGAACAGAAAGAAAGCATTGGAGCAACAGAACCCGGTCACATATAGTCCCT
GATGTGGCCCTTTCTGATCAAATTGAACAAGGGCAATGGGCAAATTTACCACCGGAACTT
CTTCTTGATATCATCCGTAGGGTTGAAGAGAGTGAGTTATCATGGCCTGCTCGATCCGCC
CTTCTCTTTTGTGCATCTGTTTGCAAATCGTGGAGGGGAATTACCAAGGAGATTGTTAAG
ACTCCTGAGGAATGTGGTAGGCTTACCTTTCCCATTTCACTGAAACAGCCGGGTCCCCGT
GAATCCCCAATCCAGTGCTTTATTAAACGGGACAGAGCTAATTCAGTTTATCGTCTCTAC
TTTGGCATGATTCCATCTGAGGATGAGAGGGATAAACTATTGTTGTCTGCCAAAAAAATC
AGAAGGGCAACAAACACAGACTTTGTGATATCATTTGTTGCAGATGATTTTTCTCGAGCT
AGCAATATGTCTAACTTTCTTGGGACCAAGTTCTCCATACATGATAGCCAACCTCCAAGT
GATGCAGCCATTCAACAACCTGGTCGTCTCAGTCGGAGATTTCATGCAAAACAAGTTTCT
CCAAGAGTTCCTGCGTGCAACTATAGAGTAGCTACCATTTCGTATGAACTCAATGTCCTT
CGTACCAGAGGACCTAGGAGAATGCATTCTGCCATGCACTCTATCCCCTTGTCTTCAATC
CAGGAGGGTGGCAGTGCTCCAACACCTAAATCATTCCCACAATCTTTTGATGAGAAGTCA
TTTTCTGCACCACTTGCAATAGCAAAGGAGTCAGCTATGGATATCAGCTCCTCTGGCATT
TCAAGGTCAGCAGTAACGGCGACTTCTCAAGACATACTTGTGCTAAAAAACAAGGCTCCT
AGGTGGCATGAACAATTGCAGTGCTGGTGCTTAAATTTTAAAGGCCGTGTTACAGTTGCT
TCTGTGAAAAATTTTCAGCTAGTGGCAGCAGTTGATCCATCTCACAATATACCAGTCGCA
GAACAAGAAAAAGTAATTTTACAGTTTGGAAAAATTGGGAAAGACATCTTCACCATGGAC
TACCGCTATCCACTTTCTGCTTTCCAAGCTTTTGCAATCTGCTTGAGCAGCTTTGACACG
AAGCCAGCCTGTGAATGA

Peptide Sequence

PEP ID

Solyc02g085130.3.1
PEP Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4BB27_SOLLC)
Sequence

MSLKSIVRELREMKDGIGNISRRGTERKHWSNRTRSHIVPDVALSDQIEQGQWANLPPEL
LLDIIRRVEESELSWPARSALLFCASVCKSWRGITKEIVKTPEECGRLTFPISLKQPGPR
ESPIQCFIKRDRANSVYRLYFGMIPSEDERDKLLLSAKKIRRATNTDFVISFVADDFSRA
SNMSNFLGTKFSIHDSQPPSDAAIQQPGRLSRRFHAKQVSPRVPACNYRVATISYELNVL
RTRGPRRMHSAMHSIPLSSIQEGGSAPTPKSFPQSFDEKSFSAPLAIAKESAMDISSSGI
SRSAVTATSQDILVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVDPSHNIPVA
EQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE*

Transcript Sequence

Transcript ID

Solyc02g085130.3.1
Transcript Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4BB27_SOLLC)
Sequence

TAAAATATTATATAAATAGCATCAAATATGAGGGACAATTTTTGTCATTTTGAGACATCT
GGGTGTGGGAAAACTTTGATAGATACGCACACAGAGAAGCCCCTTTCGTCTTCCTAGCTC
CTGACATTTTTCCTTCAATTTGTTGGCGGAATTAACGGCGGTTTTTCGGTGGTGGTGCCA
CTGGTGTTTCCGGCGACATGACATGAAGTCTAAAGCGTCGCCGATCCAGTGTTCCACCTC
ATTCGCCGCGTTTTTTCCTTCTTCGATCTCTGCATCCCGCAGCTTGCTTTCAACGATTTC
ATCTTCTTTGTAACTCGTGTTTCTTAGGGAAGTTGCAGTTGATGTGATTGATAGAAATGT
CTTTGAAGAGCATTGTTCGTGAGCTGAGGGAGATGAAAGATGGTATAGGGAATATATCAA
GGAGGGGAACAGAAAGAAAGCATTGGAGCAACAGAACCCGGTCACATATAGTCCCTGATG
TGGCCCTTTCTGATCAAATTGAACAAGGGCAATGGGCAAATTTACCACCGGAACTTCTTC
TTGATATCATCCGTAGGGTTGAAGAGAGTGAGTTATCATGGCCTGCTCGATCCGCCCTTC
TCTTTTGTGCATCTGTTTGCAAATCGTGGAGGGGAATTACCAAGGAGATTGTTAAGACTC
CTGAGGAATGTGGTAGGCTTACCTTTCCCATTTCACTGAAACAGCCGGGTCCCCGTGAAT
CCCCAATCCAGTGCTTTATTAAACGGGACAGAGCTAATTCAGTTTATCGTCTCTACTTTG
GCATGATTCCATCTGAGGATGAGAGGGATAAACTATTGTTGTCTGCCAAAAAAATCAGAA
GGGCAACAAACACAGACTTTGTGATATCATTTGTTGCAGATGATTTTTCTCGAGCTAGCA
ATATGTCTAACTTTCTTGGGACCAAGTTCTCCATACATGATAGCCAACCTCCAAGTGATG
CAGCCATTCAACAACCTGGTCGTCTCAGTCGGAGATTTCATGCAAAACAAGTTTCTCCAA
GAGTTCCTGCGTGCAACTATAGAGTAGCTACCATTTCGTATGAACTCAATGTCCTTCGTA
CCAGAGGACCTAGGAGAATGCATTCTGCCATGCACTCTATCCCCTTGTCTTCAATCCAGG
AGGGTGGCAGTGCTCCAACACCTAAATCATTCCCACAATCTTTTGATGAGAAGTCATTTT
CTGCACCACTTGCAATAGCAAAGGAGTCAGCTATGGATATCAGCTCCTCTGGCATTTCAA
GGTCAGCAGTAACGGCGACTTCTCAAGACATACTTGTGCTAAAAAACAAGGCTCCTAGGT
GGCATGAACAATTGCAGTGCTGGTGCTTAAATTTTAAAGGCCGTGTTACAGTTGCTTCTG
TGAAAAATTTTCAGCTAGTGGCAGCAGTTGATCCATCTCACAATATACCAGTCGCAGAAC
AAGAAAAAGTAATTTTACAGTTTGGAAAAATTGGGAAAGACATCTTCACCATGGACTACC
GCTATCCACTTTCTGCTTTCCAAGCTTTTGCAATCTGCTTGAGCAGCTTTGACACGAAGC
CAGCCTGTGAATGA