Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g084900.2.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT2G18193.1)
Sequence

ATGTACGACATCTCAAAAATGCAGAACACGGCATCGACTTTATTCTCGGCGTACGCTTCT
CTTGCGGCGTCGATGATGCTTGTTCGCACCATGGCTAACGATATCATCCCAAAATCACTC
CTCACATATATCCAATCAGCTATCAGCTATCTCTTCACTCCACTTTCTACCCAACTCACC
ATCATCGTCGATGAACAGTGTGGAATGACCCGAAATCAAGTTTACGAGGCCGCCGAAATT
TACCTCCGTACAAAGATCGGTCCGAACGCCGACAAAGTCCGGGCCCACAAAACCCCTAAA
CAGAAAAACATCAACGTGAGCATAGAGAAGGATGAAGAGATCACTGATGTATACGGCGTC
GTACAGATGAAATGGAGATTGGTCTCTGTTGAGCCTCAGGATAGACATGGGTATACCCCA
GAGAAAAGATTCTTTGAGCTGAGTTTTAATAAAAGGTTTAAAGAAAGTGTTTTGAATGAG
TATTTACCCTTTGTGTTGACAAAGGCTAAAGAAATTCAAGATAACGATAGGGCTGTGAAA
TTGTATACAAGGGATTGTCCTTGTGGTAGTGATGATGATGGGTACGGGTATGGAGGTGGG
GGTGGTGGGGTTTGGGGTTCCATAAATTTGGATCATCCTGCAACTTTTGATACTTTGGCT
ATGGAACCTGAAATGAAGAAGATGATAATTGAGGATCTTGATAGATTTGTGAAAAGGAGG
GATTTTTACAAGAAAGTTGGTAAGGCATGGAAAAGAGGATATCTTTTGTATGGACCTCCA
GGAACAGGGAAATCTAGCTTGATTGCTGCCATGGCCAATTACTTAAAGTTCGATATTTAT
GATTTGGAACTCACCAGTTTGTATTCTAATTCGGAATTGAGAAGGATTTTGATCTCCACT
TCAAATCGATCCATTATTGTGATTGAAGATATTGATTGTAGTGTGGAAATGCATGATCGA
AATCTTGGACATCAACCCAGTGACACTAAGATAACGTTATCGGGTTTGTTGAACTTCATT
GATGGATTGTGGTCCAATTGCGGGGATGAAAGAATTATTGTATTTACAACCAACCATAAG
GAGAAGTTGGATCCTGCTTTGTTGAGACCTGGTCGAATGGATATGCACATTCATATGTCC
TATTGTACTAATCAGAGTTTCAAGATTCTGGCTTTTAACTACTTGGGTGTATCTGATCAT
AGACTATTCGGGGAGATTGAAGGCCTAATCAAGAATGTAGAGGTGACCCCTGCAGAAGTT
GCAGAGGAACTGATGAGAAGTGAGGATGCTGAGGTTGTCCTTGAGGGAGTGCTTAATTTG
CTCAAGCGAAAAGCTGATGAAGCCAATGAAATCAAGGAGGAGAAGAGTCCTAGCACCCCA
GAAGACGATGAGAAGGAAGAGATTGAGGACAAAAAGGTTGATGAAGGTGAGATTCAAGAA
GCTAAAAGACTGAGAACTGAAGTGTTGGTTCATACTTTGAGAAACCAAAGGAGAGGAAGA
ATGAGAATAGGAAGACCGAATAGAGGACGAGGGGGGCGTTGGTAA

Peptide Sequence

PEP ID

Solyc02g084900.2.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT2G18193.1)
Sequence

MYDISKMQNTASTLFSAYASLAASMMLVRTMANDIIPKSLLTYIQSAISYLFTPLSTQLT
IIVDEQCGMTRNQVYEAAEIYLRTKIGPNADKVRAHKTPKQKNINVSIEKDEEITDVYGV
VQMKWRLVSVEPQDRHGYTPEKRFFELSFNKRFKESVLNEYLPFVLTKAKEIQDNDRAVK
LYTRDCPCGSDDDGYGYGGGGGGVWGSINLDHPATFDTLAMEPEMKKMIIEDLDRFVKRR
DFYKKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTSLYSNSELRRILIST
SNRSIIVIEDIDCSVEMHDRNLGHQPSDTKITLSGLLNFIDGLWSNCGDERIIVFTTNHK
EKLDPALLRPGRMDMHIHMSYCTNQSFKILAFNYLGVSDHRLFGEIEGLIKNVEVTPAEV
AEELMRSEDAEVVLEGVLNLLKRKADEANEIKEEKSPSTPEDDEKEEIEDKKVDEGEIQE
AKRLRTEVLVHTLRNQRRGRMRIGRPNRGRGGRW*

Transcript Sequence

Transcript ID

Solyc02g084900.2.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT2G18193.1)
Sequence

CAAAATCATCGTGTCCCTAAACCATCGCCAGCCGGATTCACTGTGTCCCGGCAATCCAAT
TATCGAAAATGTACGACATCTCAAAAATGCAGAACACGGCATCGACTTTATTCTCGGCGT
ACGCTTCTCTTGCGGCGTCGATGATGCTTGTTCGCACCATGGCTAACGATATCATCCCAA
AATCACTCCTCACATATATCCAATCAGCTATCAGCTATCTCTTCACTCCACTTTCTACCC
AACTCACCATCATCGTCGATGAACAGTGTGGAATGACCCGAAATCAAGTTTACGAGGCCG
CCGAAATTTACCTCCGTACAAAGATCGGTCCGAACGCCGACAAAGTCCGGGCCCACAAAA
CCCCTAAACAGAAAAACATCAACGTGAGCATAGAGAAGGATGAAGAGATCACTGATGTAT
ACGGCGTCGTACAGATGAAATGGAGATTGGTCTCTGTTGAGCCTCAGGATAGACATGGGT
ATACCCCAGAGAAAAGATTCTTTGAGCTGAGTTTTAATAAAAGGTTTAAAGAAAGTGTTT
TGAATGAGTATTTACCCTTTGTGTTGACAAAGGCTAAAGAAATTCAAGATAACGATAGGG
CTGTGAAATTGTATACAAGGGATTGTCCTTGTGGTAGTGATGATGATGGGTACGGGTATG
GAGGTGGGGGTGGTGGGGTTTGGGGTTCCATAAATTTGGATCATCCTGCAACTTTTGATA
CTTTGGCTATGGAACCTGAAATGAAGAAGATGATAATTGAGGATCTTGATAGATTTGTGA
AAAGGAGGGATTTTTACAAGAAAGTTGGTAAGGCATGGAAAAGAGGATATCTTTTGTATG
GACCTCCAGGAACAGGGAAATCTAGCTTGATTGCTGCCATGGCCAATTACTTAAAGTTCG
ATATTTATGATTTGGAACTCACCAGTTTGTATTCTAATTCGGAATTGAGAAGGATTTTGA
TCTCCACTTCAAATCGATCCATTATTGTGATTGAAGATATTGATTGTAGTGTGGAAATGC
ATGATCGAAATCTTGGACATCAACCCAGTGACACTAAGATAACGTTATCGGGTTTGTTGA
ACTTCATTGATGGATTGTGGTCCAATTGCGGGGATGAAAGAATTATTGTATTTACAACCA
ACCATAAGGAGAAGTTGGATCCTGCTTTGTTGAGACCTGGTCGAATGGATATGCACATTC
ATATGTCCTATTGTACTAATCAGAGTTTCAAGATTCTGGCTTTTAACTACTTGGGTGTAT
CTGATCATAGACTATTCGGGGAGATTGAAGGCCTAATCAAGAATGTAGAGGTGACCCCTG
CAGAAGTTGCAGAGGAACTGATGAGAAGTGAGGATGCTGAGGTTGTCCTTGAGGGAGTGC
TTAATTTGCTCAAGCGAAAAGCTGATGAAGCCAATGAAATCAAGGAGGAGAAGAGTCCTA
GCACCCCAGAAGACGATGAGAAGGAAGAGATTGAGGACAAAAAGGTTGATGAAGGTGAGA
TTCAAGAAGCTAAAAGACTGAGAACTGAAGTGTTGGTTCATACTTTGAGAAACCAAAGGA
GAGGAAGAATGAGAATAGGAAGACCGAATAGAGGACGAGGGGGGCGTTGGTAAGGGAAAC
GGAAGATGTAGTAGGTATTATTCTAGTGCAATACCTCGATGCTTAATGTGTAAACTTATG
CACTTTTCACTTGTTTTTTGATCAAATATAGAAGTGCATGGTAACGAGTAAAGAAATTTC
TTAACTTTCGAGATCAGGGCAATTGCAATGCAGATGTTATTGTAACAAGTTCTCAGCAAC
TTTTCATGGTTCTTATGTTATCTTAGTACAGTATTACTAGCATTTTTTGAATCAAT