Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g084880.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G27660.1)
Sequence

ATGGATTCTACGAATCTTTATAATCATCATCAACTTCAACAGCTTGCTGGATATCCCTTT
TTCAGTACTGGAGTTTCAACTCTACATGATTGGAACTCAGGCATCACCTCGGAAGAAGAA
TATTACTACAAGCTGGGACACATGAAAAGGATCTCATCAGAAGAGCTCATGTGGAAAAGA
GGCATCGACACATTTCCATTAATGAACACCTCAATGTTCCACGACGGACATCATGAATCA
TCCAACGATCCGCTGGATGACAAAAATAACAAGGCCGGCTACATAATATCCAATGATTAT
TTCCTCAAAATGAAAGATATGAATAGTTTGAGTAACAACATGTTCAAAGAAAGTTACTTT
GAAAACGAACAACAACATGCTTTTGATCTGAATGAGAATCTTCTGTCCGAAGATTCTTAC
ATGAACAATGCTAATAATTCGAGTTATGTCTCAAGTCATGATATGGAATATTCAGATTTC
CAGGGGTTGAAGTTAGCATTTAATGGACTAACTTTCAAGAACAGCCATGATAGTAATAGT
AATTGCTTTGGCCATTTCACTACAGAAAGGATGTCTTCGGGTTTTGCTGATGGACTACAA
GAATTAACCCATAGTCCATCATCCAAAAAAATCACATCAAACGTTAGGAAGAACATTGGA
GTTTCTTCAAAAGCAAAAAGATCTGCTGAAGATGAAGCTAATCCATGTCAAGAAGCATCA
AAGAAGTCTCGAGTTACATCGCAATCTCCAAGCACATTAATGCTAAAGGTGAGAAAGGAA
AAACTAGGAGACAGGATTTCAGCTCTACACAGATTAGTGGCACCTTTTGGCAAGACTGAT
ACTGCATCAGTATTAACAGAAGCCATTGGCTATATTCAGTTCCTTCAGGACCAAATACTG
ACATTGAGTATGCCTTATTCGAAATCAACTGAAAGGAAGCTCCATCACATAAATCTAAAG
GATTCGAGCATAGAGGCAGTGCTAGATCTAGAGAGTAGAGGATTATGTTTGGTGCCAACA
TCATTTTCTTCTTACATCTCTCAGTCCTGTGATTGA

Peptide Sequence

PEP ID

Solyc02g084880.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G27660.1)
Sequence

MDSTNLYNHHQLQQLAGYPFFSTGVSTLHDWNSGITSEEEYYYKLGHMKRISSEELMWKR
GIDTFPLMNTSMFHDGHHESSNDPLDDKNNKAGYIISNDYFLKMKDMNSLSNNMFKESYF
ENEQQHAFDLNENLLSEDSYMNNANNSSYVSSHDMEYSDFQGLKLAFNGLTFKNSHDSNS
NCFGHFTTERMSSGFADGLQELTHSPSSKKITSNVRKNIGVSSKAKRSAEDEANPCQEAS
KKSRVTSQSPSTLMLKVRKEKLGDRISALHRLVAPFGKTDTASVLTEAIGYIQFLQDQIL
TLSMPYSKSTERKLHHINLKDSSIEAVLDLESRGLCLVPTSFSSYISQSCD*

Transcript Sequence

Transcript ID

Solyc02g084880.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT1G27660.1)
Sequence

TCATATAACTCATGAACATGTTTCTTGATTCTATTTATTTTAATCCACCCTAGAATTTTT
CAGCACAATATTCGGGATATTTGAATCAATAATTTTATCCACCTTATTGTGTTTGATTTA
ATTTGTACTTTTTCTTTATTTGAATATACACCGATTATTATCTCCTAAAACACTTTTGAA
AAGTAGAGGGGGTTGTTCAACAATGAGGCCAATTAAGAAGAAGCCAAAATATAGAGGACA
AAAAATGGGCCATAATTTCATATTTAGTAAATTGATTATTCCTTATACCTTTTTATCTGA
CGTTGCCTTTGGTGGGTACTTGATTTTGGACTCTGGCCCTTTATGTTAACACGCCTTCAA
TAATATCCTACTTTCCCCCTAAAATAATCCTATCATTTTCCTTGCTATGCATATACCTAT
AACTATCAAAAAGTCATTACAATGGGTGGACTATATATTATTGATGAAATTGTGAAATCA
ATTCTTATTTTGCGCCCCTCAAAAATATATTCTATCTAAAATACAATAGGGACATCCATT
TATTCTTAATGTTTGTTTCATGTATTAAAGGAAAAATGGGATAAGTACCGTTATTGCCAA
ATCAATTTCACTAACGTGTTATCAATAAAACATGTGTTTACACGAGGAATCATTCCATCA
AATGTTCGTGTAACATGAAATAAACTTTTAGGTTAGCAGAACATCTCATCGATAAATTTT
TATTTCAGTAACTTAAATCATGTGTTGCCTTCTTCGTATTTAGAATTAGAATTTACAAGC
CCCATGTGAAAAATAAGCTGGAATAAAAAAGTAATAATGATATCGGTTGAATCACGAGGA
ATTTTACATACAGTCTTCAAAAATTCTTCTTGCATTTTTACTGAACTTCATCAAACCTAT
AAGTTAGAGTAAAAAATATGTCAGGCAATTAAGATTATATAGATTGGATAGGAAAAAGGA
TACATCAACTACGAATAAAGACATTTGCCATCTGTATGAAATGTTGAGAATACGACTTGA
TCCAGTACTGGTTTAACTAGGCACACGATGATAAACAAAGTATACACTACGTATTTTTTA
AACAATTACAACAAAAGAAAAAAACGAAGCAATTAGTATAAACTAGTACTAGCTAATTAA
TATTGGTAGCTGTAACAATTTTTCTAGTGGAATAATTATAATTAGGACGACTACATATTA
ATACATGCCTCATTCAAACATAATTCATTAAATGGAGTACTTAGTTTAGGAAGTAGGTTT
CATCTACTTAATTATATTGGACAATCATCACTTTATTTAAATTGAGATAGACCCATAAAT
TTATTTGCTTAACATTGTATCCGATCCTCATGAGCTTTATAAATTTTGAAAAAGTAAAAA
GAAAAGAGGAACATATGTTTAGTTAATCAAAGACATTATATTTTTGTTCAATTTCGTATA
ATTTAAGGACATTTTTTTACCTCTTTTTGTTATATTTTTGAATAAGATATATGCAAATTA
TAGAGTCTAACATCGATATAAATGGACATCATATTTACATCACTTTCCACCATATATATA
AAGGTTAGTTTGCTTAGCTTCTAAACTTAAAATTGCACATGTTTTCTGAGATTGCCATCA
TTGAATAGCCTGCTAGCAAAATGAATAGGGACACACACTTATCTCAGTGCACATTAATTT
TCTTCTATTCCTTTGTCTCTCTTGTCTAATTCCCCTCAGTCTCTCTCTTCCTTACTGAAC
CGACCATGCGTGCAAATATACGTGCTACCCTTGAGAAAGAACTAAATTTAACCTAGCTAG
CCATTCAACAACTTCCTCTTCTTTCTTTTTTTCTTTTGATATAATTTCTAGATTTGTCCA
TGGATTCTACGAATCTTTATAATCATCATCAACTTCAACAGCTTGCTGGATATCCCTTTT
TCAGTACTGGAGTTTCAACTCTACATGATTGGAACTCAGGCATCACCTCGGAAGAAGAAT
ATTACTACAAGCTGGGACACATGAAAAGGATCTCATCAGAAGAGCTCATGTGGAAAAGAG
GCATCGACACATTTCCATTAATGAACACCTCAATGTTCCACGACGGACATCATGAATCAT
CCAACGATCCGCTGGATGACAAAAATAACAAGGCCGGCTACATAATATCCAATGATTATT
TCCTCAAAATGAAAGATATGAATAGTTTGAGTAACAACATGTTCAAAGAAAGTTACTTTG
AAAACGAACAACAACATGCTTTTGATCTGAATGAGAATCTTCTGTCCGAAGATTCTTACA
TGAACAATGCTAATAATTCGAGTTATGTCTCAAGTCATGATATGGAATATTCAGATTTCC
AGGGGTTGAAGTTAGCATTTAATGGACTAACTTTCAAGAACAGCCATGATAGTAATAGTA
ATTGCTTTGGCCATTTCACTACAGAAAGGATGTCTTCGGGTTTTGCTGATGGACTACAAG
AATTAACCCATAGTCCATCATCCAAAAAAATCACATCAAACGTTAGGAAGAACATTGGAG
TTTCTTCAAAAGCAAAAAGATCTGCTGAAGATGAAGCTAATCCATGTCAAGAAGCATCAA
AGAAGTCTCGAGTTACATCGCAATCTCCAAGCACATTAATGCTAAAGGTGAGAAAGGAAA
AACTAGGAGACAGGATTTCAGCTCTACACAGATTAGTGGCACCTTTTGGCAAGACTGATA
CTGCATCAGTATTAACAGAAGCCATTGGCTATATTCAGTTCCTTCAGGACCAAATACTGA
CATTGAGTATGCCTTATTCGAAATCAACTGAAAGGAAGCTCCATCACATAAATCTAAAGG
ATTCGAGCATAGAGGCAGTGCTAGATCTAGAGAGTAGAGGATTATGTTTGGTGCCAACAT
CATTTTCTTCTTACATCTCTCAGTCCTGTGATTGAGAAATCGTTGGACAACTATTACTTT
CGTGGAAGCATATGGCGGGTAGGATAAATTGTACAGTTGCTGTGACTTTTCATGCCCAAA
ATCATGCACATAATGTTTATCGTGACATACTATATGTTTAATTTGCTATTTATAATCACT
TAAAAAGATTAGTACCGTTTGTCCTAAACTGGGCGTTGTCCATAGTGCTCTTTATGTAAA
TTAAGATTTGGAGGACTCCACTCAATTCTCGACTCTCCAAATAATAGGTCTATCATTT