Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g084750.3.1
CDS Infomation

Radical sam protein, putative (AHRD V3.3 *** B9S686_RICCO)
Sequence

ATGGCGTCTTCTCTATCTTCTCTATCGACCATGTTGAGCCAACCTCACTGTGCTGTGCGC
ATCAAATTCCCTAAACAATATTCGGTCAGATTCCTTTCTTCGAAGCTTCTTGAAGTTCAA
TCAACCTCCTCCCGCCGCACCTCAGTTTCTCTTGGGAGGAGTTCTACATTCTCTATCAAG
ATATCCAGGAATTTCTCGCAGTGTCACTCCCGCACTTCCTTAACCAGCAAGAACCAAATT
CCAACCCTCCGTGACTTCATACCCAAAGCTACTCAGACTGTTTCTTCTTCCGATGTTCAG
CAGGAGTCTGTGATGATATCTGACGTTATGCCTAGAGGACGCATCTATCATGAAACTTAT
GGATGTCAAATGAATGTCAATGATATGGAGATTGTTTTATCCATCATGAAAAATGCTGGA
TACACTGAAAGTGTGGAAGTCCCAGAAAATGCTGAGATAATATTTATAAATACTTGTGCT
ATAAGGGACAATGCAGAACTTAAGGTTTGGCAGAGGCTCAATTATTTTTGGTTTCTTAAG
AGGCAATGGAAGAGCAATGTTGCCTCTGGAAGGTCACAGTCTGCACATCCCCCCAAAGTA
GTTGTGCTGGGGTGTATGGCTGAGAGGTTGAAGGACAAAATATTGGATGCAGATAAGATG
GTTGACGTAGTTTGTGGGCCTGATGCTTATCGAGACTTGCCACGCCTATTGGAAGAAGTG
GACTATGGTCAAAAAGGTATCAATACTCTACTTTCACTTGAAGAAACTTACGCAGATATT
AATCCAGTCCGCATCTCCAAAAATTCTATATCTGCATTTGTATCTGTGATGAGGGGTTGC
AATAATATGTGTTCATTCTGCATTGTTCCCTTCACTAGAGGGAGAGAACGGTCTCGCCCA
GTGGAATCAATCGTGAAAGAGGTCGCGGAACTTTGGAAAGAGGGAGTCAAAGAGGTTACG
CTTCTCGGCCAAAATGTAAATAGCTATAATGATACATCTGGAGTTGAAAATCCGGATGAA
CCAGCAGTCAGTTGGGAACTTAGTGATGGATTCTCCAGCATGTTTAAAGTAAAACATGTG
GGTCTACGGTTTGCTGATCTCCTAGATAGACTTGCCATAGAATTTCCTGAAATGCGGTTC
AGATACACTTCCCCACATCCTAAAGATTTTCCAGATGATTTGTTGTATGTAATGCGGGAC
AGGTACAATATCTGCAAAAGCATTCATTTGCCAGCACAATCAGGCAGCAGTGCAGTGCTT
GAAAGAATGCGTCGTGGATACACTCGCGAAGTATATTTAGATCTCGTGAAGAAGATAAGG
GATATAATACCGGATATGGGTATAAGCAGTGACTTCATATGTGGTTTCTGTGGAGAAACG
GAAGAGGATCATGAAGACACACTAAGCCTTGTAAAGACTGTTTGTTATGATATGGCATAC
ATGTTTGCTTACAGCATGAGAGAGAAAACACACGCGCACAGAAAATATGTTGATGATGTT
CCTGAAGATGTGAAGCAGAGGAGGCTCACAGAACTAATAGAAGCTTTTCGCGGGAGTACA
GGTCAGTGCTATGACGCTAAAATTGGTACAATCCAACTTGTGCTAGTTGAAGGGCCAAAT
AAGAGAGCCCCCGACACAGAGTTAATTGGTAAGAGCGATAGAGGCCATAGGGTATCATTT
ACGAACCTGCTTATCCCAGATAAGGTTGATAATAATGGAAAGCGCAATCCAAAGGTTGGT
GATTATGTTGAAGTACACATCACGAAATCCACAAGGGCATCTCTGTTTGGAGAAGCACTC
GCTATAACCAAATTAAGCTCATTTTACAACACTTCACATGAAGAAGCTGTTGCCTTTGCC
AGCAGAACTTAA

Peptide Sequence

PEP ID

Solyc02g084750.3.1
PEP Infomation

Radical sam protein, putative (AHRD V3.3 *** B9S686_RICCO)
Sequence

MASSLSSLSTMLSQPHCAVRIKFPKQYSVRFLSSKLLEVQSTSSRRTSVSLGRSSTFSIK
ISRNFSQCHSRTSLTSKNQIPTLRDFIPKATQTVSSSDVQQESVMISDVMPRGRIYHETY
GCQMNVNDMEIVLSIMKNAGYTESVEVPENAEIIFINTCAIRDNAELKVWQRLNYFWFLK
RQWKSNVASGRSQSAHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEV
DYGQKGINTLLSLEETYADINPVRISKNSISAFVSVMRGCNNMCSFCIVPFTRGRERSRP
VESIVKEVAELWKEGVKEVTLLGQNVNSYNDTSGVENPDEPAVSWELSDGFSSMFKVKHV
GLRFADLLDRLAIEFPEMRFRYTSPHPKDFPDDLLYVMRDRYNICKSIHLPAQSGSSAVL
ERMRRGYTREVYLDLVKKIRDIIPDMGISSDFICGFCGETEEDHEDTLSLVKTVCYDMAY
MFAYSMREKTHAHRKYVDDVPEDVKQRRLTELIEAFRGSTGQCYDAKIGTIQLVLVEGPN
KRAPDTELIGKSDRGHRVSFTNLLIPDKVDNNGKRNPKVGDYVEVHITKSTRASLFGEAL
AITKLSSFYNTSHEEAVAFASRT*

Transcript Sequence

Transcript ID

Solyc02g084750.3.1
Transcript Infomation

Radical sam protein, putative (AHRD V3.3 *** B9S686_RICCO)
Sequence

ACGAAATAGTAGTACGACCGGTTTGTTTTTCGCCTTCTGTGAGCCGCCGAAGCCAGCTCG
CCGGTTTGGTTGTGGCCATTCGTAGCCCTATCCACAGTCTGCAACCACAACAAACCCAAA
CCAAAAAAATGGCGTCTTCTCTATCTTCTCTATCGACCATGTTGAGCCAACCTCACTGTG
CTGTGCGCATCAAATTCCCTAAACAATATTCGGTCAGATTCCTTTCTTCGAAGCTTCTTG
AAGTTCAATCAACCTCCTCCCGCCGCACCTCAGTTTCTCTTGGGAGGAGTTCTACATTCT
CTATCAAGATATCCAGGAATTTCTCGCAGTGTCACTCCCGCACTTCCTTAACCAGCAAGA
ACCAAATTCCAACCCTCCGTGACTTCATACCCAAAGCTACTCAGACTGTTTCTTCTTCCG
ATGTTCAGCAGGAGTCTGTGATGATATCTGACGTTATGCCTAGAGGACGCATCTATCATG
AAACTTATGGATGTCAAATGAATGTCAATGATATGGAGATTGTTTTATCCATCATGAAAA
ATGCTGGATACACTGAAAGTGTGGAAGTCCCAGAAAATGCTGAGATAATATTTATAAATA
CTTGTGCTATAAGGGACAATGCAGAACTTAAGGTTTGGCAGAGGCTCAATTATTTTTGGT
TTCTTAAGAGGCAATGGAAGAGCAATGTTGCCTCTGGAAGGTCACAGTCTGCACATCCCC
CCAAAGTAGTTGTGCTGGGGTGTATGGCTGAGAGGTTGAAGGACAAAATATTGGATGCAG
ATAAGATGGTTGACGTAGTTTGTGGGCCTGATGCTTATCGAGACTTGCCACGCCTATTGG
AAGAAGTGGACTATGGTCAAAAAGGTATCAATACTCTACTTTCACTTGAAGAAACTTACG
CAGATATTAATCCAGTCCGCATCTCCAAAAATTCTATATCTGCATTTGTATCTGTGATGA
GGGGTTGCAATAATATGTGTTCATTCTGCATTGTTCCCTTCACTAGAGGGAGAGAACGGT
CTCGCCCAGTGGAATCAATCGTGAAAGAGGTCGCGGAACTTTGGAAAGAGGGAGTCAAAG
AGGTTACGCTTCTCGGCCAAAATGTAAATAGCTATAATGATACATCTGGAGTTGAAAATC
CGGATGAACCAGCAGTCAGTTGGGAACTTAGTGATGGATTCTCCAGCATGTTTAAAGTAA
AACATGTGGGTCTACGGTTTGCTGATCTCCTAGATAGACTTGCCATAGAATTTCCTGAAA
TGCGGTTCAGATACACTTCCCCACATCCTAAAGATTTTCCAGATGATTTGTTGTATGTAA
TGCGGGACAGGTACAATATCTGCAAAAGCATTCATTTGCCAGCACAATCAGGCAGCAGTG
CAGTGCTTGAAAGAATGCGTCGTGGATACACTCGCGAAGTATATTTAGATCTCGTGAAGA
AGATAAGGGATATAATACCGGATATGGGTATAAGCAGTGACTTCATATGTGGTTTCTGTG
GAGAAACGGAAGAGGATCATGAAGACACACTAAGCCTTGTAAAGACTGTTTGTTATGATA
TGGCATACATGTTTGCTTACAGCATGAGAGAGAAAACACACGCGCACAGAAAATATGTTG
ATGATGTTCCTGAAGATGTGAAGCAGAGGAGGCTCACAGAACTAATAGAAGCTTTTCGCG
GGAGTACAGGTCAGTGCTATGACGCTAAAATTGGTACAATCCAACTTGTGCTAGTTGAAG
GGCCAAATAAGAGAGCCCCCGACACAGAGTTAATTGGTAAGAGCGATAGAGGCCATAGGG
TATCATTTACGAACCTGCTTATCCCAGATAAGGTTGATAATAATGGAAAGCGCAATCCAA
AGGTTGGTGATTATGTTGAAGTACACATCACGAAATCCACAAGGGCATCTCTGTTTGGAG
AAGCACTCGCTATAACCAAATTAAGCTCATTTTACAACACTTCACATGAAGAAGCTGTTG
CCTTTGCCAGCAGAACTTAAGCTATTATTAAAGCTTCTGTACAACAGTTTGCTCTTCCAT
CTTGCTTTTCTTTTGAAATCACAAAGTATTGTTAATAGTTTTAGCATTCTTGGTAGCTTA
AAGATCTTTTGCTTCCATACTGGAGTTTTATATCTGGCTGTTCCAGATAGTGCAGAGATG
AGTCATCTTTGAGCTGGTTAATTTTCAGTATCCAATTTTAGACAAGAAGTCTTGTTTGCT
TAATAATATTTGAAAATCCCGGAAATTTTGTTCTCGATAATA