Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g084730.3.1
CDS Infomation

rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4BAY8_SOLLC)
Sequence

ATGCTTGATCGTATCAAAATTTTGTCGAGCAAACTAATCATTAGCCAACATTTTTTCCGG
CGAAGTTATCGTTCGCAGTCGACTCGCCGTTTCAACAATGTCAAAGATGAAGAATATAAC
AAAGTTCGAAGAAAAACTGAAAATGAAGAAGCACAAATTTATTTACTTAAGAGTAGAGGT
CAACATCTTCTCATGAATCCTCGAGTCCTTAATTCCATAGTCCAAAAATCCAACATACTT
CCTACTGATACAGTTCTAGAAATTGGACCAGGCACCGGAAATCTCACCCTGAAGCTTCTA
GAAGTCGCCCAAAAAGTCATAGCCATCGAAATCGACAAACGTATGGTAGAGATTCTTCAT
AAGCGCGTCTCTGAACTAGGACTTCAAGACCGTTTAACTGTTATTTGCCAAGATGCTTTA
AAGACTGAGTTTCCACGGTTTGATCTTATGGTTGCCAATATCCCTTATGGAATTTCTTCG
CCTTTGGTTGCTAAATTAGTTTACGGAAAGAACTCTTATAGGAGTGGGACACTATTGCTG
CAGAAAGAATTTGCTAGGAGGCTATTGGCAAATCCAGGGGATTCAGAGTTTAATAGATTA
GCTGTGAACGTGAAGCTGGTGGCTGACGTAGAGTTTGTCATGAATGTGAGCAAGAAGGAC
TTTTTGCCATGTCCAAAGGTTGATTCTTCTGTTGTGAAGATATATCCTAAAACTGAAATT
CCAGAGGTAGACTATGAAGAATGGTGTGCGTTTACAAGAACTTGCTTCACCAAGAAAAAT
AAAACATTGGGTGCGATCTTTAAGCAGAAAAGAATGTTGATGGAGTTAATGAAGCTGCAA
GAAACCAAAGGAGATGAAGAGAATAATGCATTGTACAGTGATTATCATGTTAATGATACC
GAAGATGAAGACGGGCTGAGCAATGAAGACAATGTTAATTTCTCTCCTGATATAGGGAAG
GACCTAAATTTGTTTAGAGATATAATCAATGACATTTTAAGAACATCTGGATTTGAAGAT
AAGAGGCCTTCAAAGCTCTCCCACAAGGAGCTACTTGACTTGCTTTCTTTATTCAATCGT
GCTAGGATACATTTTCATGGTCAAGTAAATCCTAAGGATGAATGTGATGCCGAACTTGCT
TCTGCATTTGGTCCATTATAG

Peptide Sequence

PEP ID

Solyc02g084730.3.1
PEP Infomation

rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4BAY8_SOLLC)
Sequence

MLDRIKILSSKLIISQHFFRRSYRSQSTRRFNNVKDEEYNKVRRKTENEEAQIYLLKSRG
QHLLMNPRVLNSIVQKSNILPTDTVLEIGPGTGNLTLKLLEVAQKVIAIEIDKRMVEILH
KRVSELGLQDRLTVICQDALKTEFPRFDLMVANIPYGISSPLVAKLVYGKNSYRSGTLLL
QKEFARRLLANPGDSEFNRLAVNVKLVADVEFVMNVSKKDFLPCPKVDSSVVKIYPKTEI
PEVDYEEWCAFTRTCFTKKNKTLGAIFKQKRMLMELMKLQETKGDEENNALYSDYHVNDT
EDEDGLSNEDNVNFSPDIGKDLNLFRDIINDILRTSGFEDKRPSKLSHKELLDLLSLFNR
ARIHFHGQVNPKDECDAELASAFGPL*

Transcript Sequence

Transcript ID

Solyc02g084730.3.1
Transcript Infomation

rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4BAY8_SOLLC)
Sequence

ATGCTTGATCGTATCAAAATTTTGTCGAGCAAACTAATCATTAGCCAACATTTTTTCCGG
CGAAGTTATCGTTCGCAGTCGACTCGCCGTTTCAACAATGTCAAAGATGAAGAATATAAC
AAAGTTCGAAGAAAAACTGAAAATGAAGAAGCACAAATTTATTTACTTAAGAGTAGAGGT
CAACATCTTCTCATGAATCCTCGAGTCCTTAATTCCATAGTCCAAAAATCCAACATACTT
CCTACTGATACAGTTCTAGAAATTGGACCAGGCACCGGAAATCTCACCCTGAAGCTTCTA
GAAGTCGCCCAAAAAGTCATAGCCATCGAAATCGACAAACGTATGGTAGAGATTCTTCAT
AAGCGCGTCTCTGAACTAGGACTTCAAGACCGTTTAACTGTTATTTGCCAAGATGCTTTA
AAGACTGAGTTTCCACGGTTTGATCTTATGGTTGCCAATATCCCTTATGGAATTTCTTCG
CCTTTGGTTGCTAAATTAGTTTACGGAAAGAACTCTTATAGGAGTGGGACACTATTGCTG
CAGAAAGAATTTGCTAGGAGGCTATTGGCAAATCCAGGGGATTCAGAGTTTAATAGATTA
GCTGTGAACGTGAAGCTGGTGGCTGACGTAGAGTTTGTCATGAATGTGAGCAAGAAGGAC
TTTTTGCCATGTCCAAAGGTTGATTCTTCTGTTGTGAAGATATATCCTAAAACTGAAATT
CCAGAGGTAGACTATGAAGAATGGTGTGCGTTTACAAGAACTTGCTTCACCAAGAAAAAT
AAAACATTGGGTGCGATCTTTAAGCAGAAAAGAATGTTGATGGAGTTAATGAAGCTGCAA
GAAACCAAAGGAGATGAAGAGAATAATGCATTGTACAGTGATTATCATGTTAATGATACC
GAAGATGAAGACGGGCTGAGCAATGAAGACAATGTTAATTTCTCTCCTGATATAGGGAAG
GACCTAAATTTGTTTAGAGATATAATCAATGACATTTTAAGAACATCTGGATTTGAAGAT
AAGAGGCCTTCAAAGCTCTCCCACAAGGAGCTACTTGACTTGCTTTCTTTATTCAATCGT
GCTAGGATACATTTTCATGGTCAAGTAAATCCTAAGGATGAATGTGATGCCGAACTTGCT
TCTGCATTTGGTCCATTATAG