Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g083980.3.1
CDS Infomation

Endoglucanase (AHRD V3.3 *** K4BAR6_SOLLC)
Sequence

ATGGAGAAAGAACCACACAAGGATAAAAGATGGGTATGGAGGGGGCTGATCCTGGTGATC
ACGGCTCTTGTTCTTGCTGCAGTTTTAATCAGTTTCCGAAAATATTTTCATCCGTCTAAT
TCTTCAGAGGCAGATTCTCATCAAGTGGTTGAAAAATATGCAAATGCTCTTAGCATTGCT
ATGCAATTCTTCGACGTTCAGAAGTCTGGAAAATTGGTGAATAATAAGATTGCTTGGAGA
GGAGATTCGGCTATGGGAGATGGAAGTGAAGTTAATTTGGATTTAAGTAGAGGAATGTAT
GATGCTGGAGACCATGTGAAGTTTGGATTTCCAATGGCATTCACTGCTACAGTTTTATCA
TGGGCTATTTTGGAGTATGGAAACCACATGAACATGGTGAACGAGCTGGATAACGCCCAT
GAATCCCTCAAGTGGATCACTGATTTTCTTACAAATGCTCATCCTTCTGAGAATGTCCTG
TATATTCAGGTGGGAGACCCAAAGCTCGATCACACGTGCTGGGAGAGACCAGAGGCCATG
ACAGGAAAAAGGCCTCTTACACAAGTTAACACATCGTATCCAGGGACAGATGTTGCGGCT
GAAAGTGCAGCAGCAATGGCGGCTGCATCCTTGGTGTTCAAGTCAATTGACTCCGCCTAC
TCAGGAACGCTGCTAGAGCATGCCAAACAGTTATTCAAGTTTGCTGATAGTTATAGAGGT
TCATATAGTATCAGCATACCTGGAGTGCAAGATTTCTATAATTCTACTGGATTTGTGGAT
GAACTCTTGTGGGCAGCTGCTTGGCTTTATCATGCTACTGGAGACAAATCTTACCTAACG
TATGTGTCTACAAATGGCAATACGTTTGCAAATTGGGGAAATCCATCTTGGTTTTCTTGG
GAAAACAAGTTGGCTGGAGTTCAGGTCCTATTATCAAGGGTCAATTTTTTTGGTTCAAAT
GAAGATATTTCAACTGAGGAAAGTCTTTCCCTCCAGTCGTATAGACAAACTGCTGAGACC
TTTTTGTGTGGACTTCTACCTGAATCCCCAATGGCAACCTCCCAAAGAACAGCAGATGGC
CTGGTATGGGTGAACCAGTGGAATCCATTCCAGTATTCTGTGGCCTCTTCATTTCTGGCA
GTGGTTTACAGTGATTACATGCTTAGCTCCCAAACATCAAATTTATATTGCAGTGGGAAG
TTGTATGAACCAACAGAATTGCGCAACTTTGCAGTTTCACAGTTGGATTATATCTTGGGA
AACAATTCTATGGAAATGAGCTACCTTGTTGGTTATGGAAGTAGATATCCTCAGCAAGTT
CACCATAGAGGTGCTTCAATTCCAGTAAATGCTAATTCTAATTGCAGTGATGGCTTCAAA
TGGCTTCACACAAGACACTCTAATCCAAATGTTGCAGTTGGAGCTCTTGTTGGGGGACCA
TCCCTTAGTGATACATACATGGACTCTCGGAACAACATTTCGCAAAGTGAACCAACAACC
TACAACAGTGCCCTCATTGTAGGACTCATCTCAGGCCTTATCACCTCTTCTTCACAAGTA
GAGTCATTTGTGAAAAACTGA

Peptide Sequence

PEP ID

Solyc02g083980.3.1
PEP Infomation

Endoglucanase (AHRD V3.3 *** K4BAR6_SOLLC)
Sequence

MEKEPHKDKRWVWRGLILVITALVLAAVLISFRKYFHPSNSSEADSHQVVEKYANALSIA
MQFFDVQKSGKLVNNKIAWRGDSAMGDGSEVNLDLSRGMYDAGDHVKFGFPMAFTATVLS
WAILEYGNHMNMVNELDNAHESLKWITDFLTNAHPSENVLYIQVGDPKLDHTCWERPEAM
TGKRPLTQVNTSYPGTDVAAESAAAMAAASLVFKSIDSAYSGTLLEHAKQLFKFADSYRG
SYSISIPGVQDFYNSTGFVDELLWAAAWLYHATGDKSYLTYVSTNGNTFANWGNPSWFSW
ENKLAGVQVLLSRVNFFGSNEDISTEESLSLQSYRQTAETFLCGLLPESPMATSQRTADG
LVWVNQWNPFQYSVASSFLAVVYSDYMLSSQTSNLYCSGKLYEPTELRNFAVSQLDYILG
NNSMEMSYLVGYGSRYPQQVHHRGASIPVNANSNCSDGFKWLHTRHSNPNVAVGALVGGP
SLSDTYMDSRNNISQSEPTTYNSALIVGLISGLITSSSQVESFVKN*

Transcript Sequence

Transcript ID

Solyc02g083980.3.1
Transcript Infomation

Endoglucanase (AHRD V3.3 *** K4BAR6_SOLLC)
Sequence

AATGAAAAATGAACACAACGATGCTCTCTACCTACCCGAAACACTTCACTCCTCTTCCAG
TACAACTTTTCTCCAAATCTCAACATCGCCATGTAATTCGTTTTCCCATCAAATGCAACA
GCAGCAGCAGCAGTGATAATGGCAACGAATCGCAACCAAACACGGTGGAGATTCGAATCA
GAAGACGTCCGTCAAAACGACAAAGGCAGAAGGAAGAAGAAATGATAAATGCAGGGAAAC
AAGCTGTTAAACCTAAACCTCCACCAAAGGATTGGGAATCAATGAATCTAACTGAGAAGG
CAATCGAATTGTACGTCGGAGAAAAAGGACTTTTGTTCTGGCTAAACAAATTTGCTTATG
CTTCTATTTTTATTATAATTGGGGGTTGGATACTTTTTCGATTTGTTGGTCCTGCATTTG
ACCTTTACCAGTTGGATACTCCTACTCCTCTTGCTCCTGAATCTATGTTTAAAGGTACAG
GAGACAAACCTTGACCCACTGGAAAACTCAAGTTTCAGAAGAAATTTTCGCTTTAATTAC
TCCAAATTTTTGTAACTTGAAAGTTATTAGTACTACTAGATTTAAGCAAATAAACATGTC
AATTGGATACTATATATATTTGTGAAGTTCAACGATGATACTTGTATAAGTTATGCGAGA
ACATATGTATATATTTGTATAAGTAAAACATGAAGCAAATATCCCCTTAATACTATTTGT
TGAACTTGAAATTGTCAACCTCTTTGAATACCCAATGACATAAGAAAATTTAAGATGGTC
CATGATATATTCTCTTTCACAACTTAAATATTGCACTTTTTTACTTTGATGTTTTAATAT
TCCTTTTTGTATGGTGTAAAGTTGAAGCTATTTGTTGCTTTGACAAAGAGGGAGCAAGCA
TAGTTGGAATATGATTAAAAAAGAATAACCTTTTGTAAGGGGGAGGGTTTTATTGGTGAC
ATAGTTTAGGAAGAGGAATAAGCATCAAGATTCTCGTTAATTACAGTTCCAAATACTTCC
AAAAAGTTGAAGTAGAGAAATCAAGAATCAGATAAAGACAAAGCTCAGATATGCCGGTTT
CATCTCTATCTACTGTATTTTGGTGATTGTCAAGATACTCAAATAGCATATATAAATAGG
CCACAAGAGGAGTATAATTTAGTTCATTATCATAATCTAGTCTCTCATCATTCGGTCATA
GAATGGAGAGGCTCATGATTTCATTCGAAACATTTCGGTGAAGAGAACTGAAATTGAATG
GAGAAAGAACCACACAAGGATAAAAGATGGGTATGGAGGGGGCTGATCCTGGTGATCACG
GCTCTTGTTCTTGCTGCAGTTTTAATCAGTTTCCGAAAATATTTTCATCCGTCTAATTCT
TCAGAGGCAGATTCTCATCAAGTGGTTGAAAAATATGCAAATGCTCTTAGCATTGCTATG
CAATTCTTCGACGTTCAGAAGTCTGGAAAATTGGTGAATAATAAGATTGCTTGGAGAGGA
GATTCGGCTATGGGAGATGGAAGTGAAGTTAATTTGGATTTAAGTAGAGGAATGTATGAT
GCTGGAGACCATGTGAAGTTTGGATTTCCAATGGCATTCACTGCTACAGTTTTATCATGG
GCTATTTTGGAGTATGGAAACCACATGAACATGGTGAACGAGCTGGATAACGCCCATGAA
TCCCTCAAGTGGATCACTGATTTTCTTACAAATGCTCATCCTTCTGAGAATGTCCTGTAT
ATTCAGGTGGGAGACCCAAAGCTCGATCACACGTGCTGGGAGAGACCAGAGGCCATGACA
GGAAAAAGGCCTCTTACACAAGTTAACACATCGTATCCAGGGACAGATGTTGCGGCTGAA
AGTGCAGCAGCAATGGCGGCTGCATCCTTGGTGTTCAAGTCAATTGACTCCGCCTACTCA
GGAACGCTGCTAGAGCATGCCAAACAGTTATTCAAGTTTGCTGATAGTTATAGAGGTTCA
TATAGTATCAGCATACCTGGAGTGCAAGATTTCTATAATTCTACTGGATTTGTGGATGAA
CTCTTGTGGGCAGCTGCTTGGCTTTATCATGCTACTGGAGACAAATCTTACCTAACGTAT
GTGTCTACAAATGGCAATACGTTTGCAAATTGGGGAAATCCATCTTGGTTTTCTTGGGAA
AACAAGTTGGCTGGAGTTCAGGTCCTATTATCAAGGGTCAATTTTTTTGGTTCAAATGAA
GATATTTCAACTGAGGAAAGTCTTTCCCTCCAGTCGTATAGACAAACTGCTGAGACCTTT
TTGTGTGGACTTCTACCTGAATCCCCAATGGCAACCTCCCAAAGAACAGCAGATGGCCTG
GTATGGGTGAACCAGTGGAATCCATTCCAGTATTCTGTGGCCTCTTCATTTCTGGCAGTG
GTTTACAGTGATTACATGCTTAGCTCCCAAACATCAAATTTATATTGCAGTGGGAAGTTG
TATGAACCAACAGAATTGCGCAACTTTGCAGTTTCACAGTTGGATTATATCTTGGGAAAC
AATTCTATGGAAATGAGCTACCTTGTTGGTTATGGAAGTAGATATCCTCAGCAAGTTCAC
CATAGAGGTGCTTCAATTCCAGTAAATGCTAATTCTAATTGCAGTGATGGCTTCAAATGG
CTTCACACAAGACACTCTAATCCAAATGTTGCAGTTGGAGCTCTTGTTGGGGGACCATCC
CTTAGTGATACATACATGGACTCTCGGAACAACATTTCGCAAAGTGAACCAACAACCTAC
AACAGTGCCCTCATTGTAGGACTCATCTCAGGCCTTATCACCTCTTCTTCACAAGTAGAG
TCATTTGTGAAAAACTGAAAACTCAACCCCATCACTCATTTTTCCCTGTTTACTAAGCAG
GCCTTGCCTTAACCTTTCATCAGAATTCAGACAGCCTGCCCTCACCAGGCTGGTGGCCTA
AACTATACTCTATCTGGACAGGGTCAGTGGCTTTGGCTCGAATCATGTATATATTATATA
TAAAGAAATGTATCATGATAGATATGTTCCTAAGAGCGATTACTCTGTCAAAGTAAAGAA
GTTGTCAAAATGTACATTTCTAACTTCCTTCAACCTAGCGGCTAGCAGTGACACCTTTGT
ATGCAATTGGAGGCATCTATATTTGTCCATGCATTGGGTGTTTCCTATGTAAATATTTGA
AATAAGAAGAAAAGTCATCTCATCCAGATGCAGTTATACTATTTAATAGGTTCATGCCTT
AAATTTCTTTCTTGTTTGTCTAACTGAGCTATGACCAATGGTATATATTATGATACATAA
ACAAGGATTTGCTAATTTATGCTCCCTGTTAATTTATTGAAACTTTTACAAATGTCAATG
AAATGTAA