Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g083820.1.1
CDS Infomation	Armadillo repeat only (AHRD V3.3 *** W0TQK6_ACAMN)
Sequence	ATGGCGGATTTAGTGAAGCAGATCTTGACAAAGCCGATCCAGTTAGCAGACCAGGTGATA AAGGCAGCTGATGAGGCAAGTTCGTTCAAGCAAGAATGTACTGATCTCAGGTCCAAAACT GAGAAACTTGTGGCTCTTCTCCGACAGGCTGCACGCGCCGGCAACGACCTTTATGAACGG CCCACGCGTCGGATCATTGACGACACCGAACAAGTTCTTGAGAAAGCTTTGGCTCTTGTG CTCAAGTGCAGAGCCCATGGACTTGTTAAGCGAGTTTTTACCATCATCCCTGCTGCACAA TTCCGTAAAATGTCTTCTCAATTGGAAAACTCCATTGGTGACGTGTCTTGGCTTCTCCGT GTTTCGGCTTCAGCTGATGAACGAGCTGATGACTGTTTGGGTCTCCCTCCTATTGCTGCG AATGAGCCAATTTTATGCCTAATTTGGGAGCAGATCGCTATTTTGTACACGGGTAGTGTT GATGACAGATCAGACGCGGCTAATTCGCTTGTTTCTTTAGCCAGAGACAATGACCGGTAT GGGAAATTGATTATTGAAGAAGGTGGAGTTGGGCCATTGCTGAAATTATTGAAGGAAGGG AAATCAGAAGGTCAGGAGAATGCTGCTAGGGCAATTGGTCTTCTTGGGCGTGACCCGGAA AGCGTTGAACACATGATACATGCTGGGGTTTGCTCAGTGTTTGCGAAAATCCTCAAAGAA GGTCCTATGAAGGTTCAAGCAGTGGTGGCTTGGGCAGTATCTGAGCTTGCTGCTCATTAT CCCAAATGTCAAGATCTTTTTCACCAGCATAATACAATTCGATTGCTGGTTAGTCATCTA GCTTTCGAGACGGTTCAGGAGCATAGCAAATACGCCATTGTCAGCAAAGCCACATCGATG CACCACGCTGTTGTCTTGGCTAGTAATACCAATGGTAGCGCTACCGATACAGCGCATAAG TTGATTGAGGATGATGACAAAAATCACACTCTTCCACATCCCTTGGGGAATAAGAAGCCT AGTCACATGCACAGTGTGGTTGCTACAGCAATGAAGGGTCAAATAAAACAGCCTCAGCAG AATCCTATCAATGGTTTAAATCAGACCAAGGTTAATGGAAATAACAGTCAGAAGCAAAAT CAAGCGCACCACCACAGTCAGCATAGTCTTTCTTCATCTGGGCTGAATAATAAAGGGAGA GAGCTAGAGGACCCTGCTACTAAGGCTTATATGAAGGCAATGGCTGCAAGAGCACTATGG AAGCTTGCCAAGGGAAATTCGCCCATTTGTCGTAGTATCACTGAATCAAGAGCGTTGCTT TGTTTTGCAGTACTGTTAGAGAAAGGACCTGAGGATGTTCAGTATGATTCTGCTATGGCA ATAATGGAAATAACATCAGTGGCGGAAGTAGACGCTGAGTTGAGAAGGTCAGCCTTCAAG CCTAATTCCCCTGCCTGCAAAGCTGTTGTTGATCAATTGCTAAGAATCATTGAACAAGCT GATTCAGATCTGCTTGTTCCATGTGTTAAAGCTATTGGGAGTTTGGCTAGGACTTTTCGA GCTACTGAGACAAGGATGATTACTCCATTAGTAAAACTGCTTGACGAGCGAGAAGCAGAT ATTTCTAAGGAAGCTGCCATTGCCCTAAAAAAATTTGCTAGCTCGGATAACTACCTTCAC CTTGATCATTCCAAGGCAATCATAAGTGCTGGAGGTGCAAAACATCTGATCCAACTCGTT TACTTTGGTGAACAAATAGTTCAGAGTCCATCATTGCTTTTGCTATGCTACATTGCATTG CACGTTCCAGATAGCGAAGAGCTTGCTCAAGCTGAGGTGCTTACAGTTCTTGAATGGGCA TCAAAACAGTCCTACTTGATTCAAGATGAATATATGGAGTCCTTACTGCAGGAAGCTAAA AGCAGGCTGGAACTGTATCAGTCCAGAGGATCAAGGGGATTCCATTAA

Peptide Sequence

PEP ID	Solyc02g083820.1.1
PEP Infomation	Armadillo repeat only (AHRD V3.3 *** W0TQK6_ACAMN)
Sequence	MADLVKQILTKPIQLADQVIKAADEASSFKQECTDLRSKTEKLVALLRQAARAGNDLYER PTRRIIDDTEQVLEKALALVLKCRAHGLVKRVFTIIPAAQFRKMSSQLENSIGDVSWLLR VSASADERADDCLGLPPIAANEPILCLIWEQIAILYTGSVDDRSDAANSLVSLARDNDRY GKLIIEEGGVGPLLKLLKEGKSEGQENAARAIGLLGRDPESVEHMIHAGVCSVFAKILKE GPMKVQAVVAWAVSELAAHYPKCQDLFHQHNTIRLLVSHLAFETVQEHSKYAIVSKATSM HHAVVLASNTNGSATDTAHKLIEDDDKNHTLPHPLGNKKPSHMHSVVATAMKGQIKQPQQ NPINGLNQTKVNGNNSQKQNQAHHHSQHSLSSSGLNNKGRELEDPATKAYMKAMAARALW KLAKGNSPICRSITESRALLCFAVLLEKGPEDVQYDSAMAIMEITSVAEVDAELRRSAFK PNSPACKAVVDQLLRIIEQADSDLLVPCVKAIGSLARTFRATETRMITPLVKLLDEREAD ISKEAAIALKKFASSDNYLHLDHSKAIISAGGAKHLIQLVYFGEQIVQSPSLLLLCYIAL HVPDSEELAQAEVLTVLEWASKQSYLIQDEYMESLLQEAKSRLELYQSRGSRGFH*

Transcript Sequence

Transcript ID	Solyc02g083820.1.1
Transcript Infomation	Armadillo repeat only (AHRD V3.3 *** W0TQK6_ACAMN)
Sequence	ATGGCGGATTTAGTGAAGCAGATCTTGACAAAGCCGATCCAGTTAGCAGACCAGGTGATA AAGGCAGCTGATGAGGCAAGTTCGTTCAAGCAAGAATGTACTGATCTCAGGTCCAAAACT GAGAAACTTGTGGCTCTTCTCCGACAGGCTGCACGCGCCGGCAACGACCTTTATGAACGG CCCACGCGTCGGATCATTGACGACACCGAACAAGTTCTTGAGAAAGCTTTGGCTCTTGTG CTCAAGTGCAGAGCCCATGGACTTGTTAAGCGAGTTTTTACCATCATCCCTGCTGCACAA TTCCGTAAAATGTCTTCTCAATTGGAAAACTCCATTGGTGACGTGTCTTGGCTTCTCCGT GTTTCGGCTTCAGCTGATGAACGAGCTGATGACTGTTTGGGTCTCCCTCCTATTGCTGCG AATGAGCCAATTTTATGCCTAATTTGGGAGCAGATCGCTATTTTGTACACGGGTAGTGTT GATGACAGATCAGACGCGGCTAATTCGCTTGTTTCTTTAGCCAGAGACAATGACCGGTAT GGGAAATTGATTATTGAAGAAGGTGGAGTTGGGCCATTGCTGAAATTATTGAAGGAAGGG AAATCAGAAGGTCAGGAGAATGCTGCTAGGGCAATTGGTCTTCTTGGGCGTGACCCGGAA AGCGTTGAACACATGATACATGCTGGGGTTTGCTCAGTGTTTGCGAAAATCCTCAAAGAA GGTCCTATGAAGGTTCAAGCAGTGGTGGCTTGGGCAGTATCTGAGCTTGCTGCTCATTAT CCCAAATGTCAAGATCTTTTTCACCAGCATAATACAATTCGATTGCTGGTTAGTCATCTA GCTTTCGAGACGGTTCAGGAGCATAGCAAATACGCCATTGTCAGCAAAGCCACATCGATG CACCACGCTGTTGTCTTGGCTAGTAATACCAATGGTAGCGCTACCGATACAGCGCATAAG TTGATTGAGGATGATGACAAAAATCACACTCTTCCACATCCCTTGGGGAATAAGAAGCCT AGTCACATGCACAGTGTGGTTGCTACAGCAATGAAGGGTCAAATAAAACAGCCTCAGCAG AATCCTATCAATGGTTTAAATCAGACCAAGGTTAATGGAAATAACAGTCAGAAGCAAAAT CAAGCGCACCACCACAGTCAGCATAGTCTTTCTTCATCTGGGCTGAATAATAAAGGGAGA GAGCTAGAGGACCCTGCTACTAAGGCTTATATGAAGGCAATGGCTGCAAGAGCACTATGG AAGCTTGCCAAGGGAAATTCGCCCATTTGTCGTAGTATCACTGAATCAAGAGCGTTGCTT TGTTTTGCAGTACTGTTAGAGAAAGGACCTGAGGATGTTCAGTATGATTCTGCTATGGCA ATAATGGAAATAACATCAGTGGCGGAAGTAGACGCTGAGTTGAGAAGGTCAGCCTTCAAG CCTAATTCCCCTGCCTGCAAAGCTGTTGTTGATCAATTGCTAAGAATCATTGAACAAGCT GATTCAGATCTGCTTGTTCCATGTGTTAAAGCTATTGGGAGTTTGGCTAGGACTTTTCGA GCTACTGAGACAAGGATGATTACTCCATTAGTAAAACTGCTTGACGAGCGAGAAGCAGAT ATTTCTAAGGAAGCTGCCATTGCCCTAAAAAAATTTGCTAGCTCGGATAACTACCTTCAC CTTGATCATTCCAAGGCAATCATAAGTGCTGGAGGTGCAAAACATCTGATCCAACTCGTT TACTTTGGTGAACAAATAGTTCAGAGTCCATCATTGCTTTTGCTATGCTACATTGCATTG CACGTTCCAGATAGCGAAGAGCTTGCTCAAGCTGAGGTGCTTACAGTTCTTGAATGGGCA TCAAAACAGTCCTACTTGATTCAAGATGAATATATGGAGTCCTTACTGCAGGAAGCTAAA AGCAGGCTGGAACTGTATCAGTCCAGAGGATCAAGGGGATTCCATTAA