Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g083450.3.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT4G35880.1)
Sequence

ATGTCTTCTTTTGTGATGTTCTTGCTAACAATAACATTGCTCTCAATTTTCCCATTTCGA
CAATGTCATGGCCGTCTTTTCACTTTTGAAATGCACCACCGTTTCTCTGAAACTGTCAAG
AAGTGGTCACTGCAGAAACTTGCTGCTCCACTTCAAAATTGGCCGGTAAAGGGAAGTCTT
CAGTATTATACTCAGCTGGCCAACCACGACAGGTTGCTACATGGCAGGAGGCTTTTTAAA
TTCGATGGACCACTTACTTTCTCTGATGGCAATTCCACTTTCCGGATCAGCTCTCTTGGA
TTCTTGCATTACACCACGGTGACTTTGGGGACACCTGGGTTGAAGTTTCTTGTGGCTCTT
GATACTGGGAGTGACTTATTTTGGGTGCCTTGTGAATGCGGCAGATGTGCTTCTACTGAT
GATCCTACACTTTACAGCTCTGATATTGAGCTTAGCATATACAGCCTGAATGGATCGTCA
ACTAGCAAGAAGGTCACCTGCAGTGATAGCTTGTGTACAGACCGCAATAATTGTCTCAGT
TCAAATAACCACTGCCCTTATTCAGTATCCTATGTCTCCTCGGAAACTTCAACTTCAGGA
ATTTTGGTGGATGATATTTTGCACTTGAGAACAGATGATAGTGAGGAAAAAAATTTTGTC
CAGGCGCGTGTGATCTTTGGTTGTGGACAGGAGCAGACTGGTTCTTTTCTAGATGTTGCA
GCCCCAAATGGTTTATTTGGGCTTGGTCTCGAGAAGGTATCAGTCCCTAGTATTCTGTCT
CAGGAAGGTTTTATGGCAGATTCTTTCTCTATGTGCTTTGGTAGTGATGGGGCAGGTCGG
ATTAGTTTTGGCGACAAGGGTAGCTTTGACCAGGAAGAGACCCCTTTTAATATAAACCCA
TTACATCCAACATACAACATTTCTGTAGATCAAATACGTGTTGGAACAACTCTCGTTGAT
TCAGGTTTTACAGCACTTTTTGATACTGGAACCTCCTTTACCTATCTTGCGGACCTATCC
TATACAAAGCTTTCAGAAAGTTTCCATTCTCAAGTACGAGACAAGCGGCGTCCACCTGAT
CCGAGGATCCCCTTTGAATATTGTTATGATATGAGTCCTGATGAAAATACTAGCTTGATT
CCTAGTTTAAGCCTAACTATGAGTGGGGGAGGCCAACTTGCTGTCAATGATCCAATTATT
GTCATATCCACACAGAATCAACTAATGTATTGCCTGGCCATTGTGAAGAGTGATGCTCTA
AATATAATTGGACAGAACTTCATGACTGGATACCGCTTTGTGTTTGATCGAGAAAAAATC
ATCCTCGGTTGGAAGAAATTTGATTGTTATGATATTGAGAAAATAGACCATTTCCCATCA
CAACCTGTTAATACCACCCATGTTCCACCTGCCTTTGCTGTTGTGCCTGGAAATGATAAT
GCAGAGAAATCACATGAAAGGACGACAACTACTCGTCAAAGTTCTTTTGCATCATCTGTT
TATCAAACATGTTATTTGAACCTCATAAACTGCTTCCTAGCATCTGTGATATTGCTACTT
TTATAA

Peptide Sequence

PEP ID

Solyc02g083450.3.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT4G35880.1)
Sequence

MSSFVMFLLTITLLSIFPFRQCHGRLFTFEMHHRFSETVKKWSLQKLAAPLQNWPVKGSL
QYYTQLANHDRLLHGRRLFKFDGPLTFSDGNSTFRISSLGFLHYTTVTLGTPGLKFLVAL
DTGSDLFWVPCECGRCASTDDPTLYSSDIELSIYSLNGSSTSKKVTCSDSLCTDRNNCLS
SNNHCPYSVSYVSSETSTSGILVDDILHLRTDDSEEKNFVQARVIFGCGQEQTGSFLDVA
APNGLFGLGLEKVSVPSILSQEGFMADSFSMCFGSDGAGRISFGDKGSFDQEETPFNINP
LHPTYNISVDQIRVGTTLVDSGFTALFDTGTSFTYLADLSYTKLSESFHSQVRDKRRPPD
PRIPFEYCYDMSPDENTSLIPSLSLTMSGGGQLAVNDPIIVISTQNQLMYCLAIVKSDAL
NIIGQNFMTGYRFVFDREKIILGWKKFDCYDIEKIDHFPSQPVNTTHVPPAFAVVPGNDN
AEKSHERTTTTRQSSFASSVYQTCYLNLINCFLASVILLLL*

Transcript Sequence

Transcript ID

Solyc02g083450.3.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT4G35880.1)
Sequence

AACTATACTAATCATTTTTGCCAAATACATTTGCACAATATAACATCCGAGAACTGGACT
CTAACTTATCCATTGATATATGTTCATGTAATAAAATTTATAGGTTAAGTATTTTTATTT
ACATAACTTGTGCTATTCTATGAAATTAAAAAAATATATTATGATATAAAAATATAAAGG
GCGGCGAACGAAAATTATTCACCAGTACAAAATAAGTGAAACAATGGAATTGACCCGCTA
AATTATCATATGATGTCGTGAATTGATATAAAAGGCCAAATGCATTTTAAAAAATGAATT
TAAGGGAAATTGGAACAATTACTACTTGTGGAAAGAAGAGTCAGTGAAGCTATAATGGAG
TAGGGCGATTTTCTTCAACTGTCAAAATTTACTCTTTTTCTCTCTCTTTTTTCCTTTTCT
TGATTCTCCCTCTGTAAACCTAACCCAATAATTTCAGTGGCCATTACAGTTCAAGATCTG
AGTTTTTCTTAGAAACGAAAAAATGTCTTCTTTTGTGATGTTCTTGCTAACAATAACATT
GCTCTCAATTTTCCCATTTCGACAATGTCATGGCCGTCTTTTCACTTTTGAAATGCACCA
CCGTTTCTCTGAAACTGTCAAGAAGTGGTCACTGCAGAAACTTGCTGCTCCACTTCAAAA
TTGGCCGGTAAAGGGAAGTCTTCAGTATTATACTCAGCTGGCCAACCACGACAGGTTGCT
ACATGGCAGGAGGCTTTTTAAATTCGATGGACCACTTACTTTCTCTGATGGCAATTCCAC
TTTCCGGATCAGCTCTCTTGGATTCTTGCATTACACCACGGTGACTTTGGGGACACCTGG
GTTGAAGTTTCTTGTGGCTCTTGATACTGGGAGTGACTTATTTTGGGTGCCTTGTGAATG
CGGCAGATGTGCTTCTACTGATGATCCTACACTTTACAGCTCTGATATTGAGCTTAGCAT
ATACAGCCTGAATGGATCGTCAACTAGCAAGAAGGTCACCTGCAGTGATAGCTTGTGTAC
AGACCGCAATAATTGTCTCAGTTCAAATAACCACTGCCCTTATTCAGTATCCTATGTCTC
CTCGGAAACTTCAACTTCAGGAATTTTGGTGGATGATATTTTGCACTTGAGAACAGATGA
TAGTGAGGAAAAAAATTTTGTCCAGGCGCGTGTGATCTTTGGTTGTGGACAGGAGCAGAC
TGGTTCTTTTCTAGATGTTGCAGCCCCAAATGGTTTATTTGGGCTTGGTCTCGAGAAGGT
ATCAGTCCCTAGTATTCTGTCTCAGGAAGGTTTTATGGCAGATTCTTTCTCTATGTGCTT
TGGTAGTGATGGGGCAGGTCGGATTAGTTTTGGCGACAAGGGTAGCTTTGACCAGGAAGA
GACCCCTTTTAATATAAACCCATTACATCCAACATACAACATTTCTGTAGATCAAATACG
TGTTGGAACAACTCTCGTTGATTCAGGTTTTACAGCACTTTTTGATACTGGAACCTCCTT
TACCTATCTTGCGGACCTATCCTATACAAAGCTTTCAGAAAGTTTCCATTCTCAAGTACG
AGACAAGCGGCGTCCACCTGATCCGAGGATCCCCTTTGAATATTGTTATGATATGAGTCC
TGATGAAAATACTAGCTTGATTCCTAGTTTAAGCCTAACTATGAGTGGGGGAGGCCAACT
TGCTGTCAATGATCCAATTATTGTCATATCCACACAGAATCAACTAATGTATTGCCTGGC
CATTGTGAAGAGTGATGCTCTAAATATAATTGGACAGAACTTCATGACTGGATACCGCTT
TGTGTTTGATCGAGAAAAAATCATCCTCGGTTGGAAGAAATTTGATTGTTATGATATTGA
GAAAATAGACCATTTCCCATCACAACCTGTTAATACCACCCATGTTCCACCTGCCTTTGC
TGTTGTGCCTGGAAATGATAATGCAGAGAAATCACATGAAAGGACGACAACTACTCGTCA
AAGTTCTTTTGCATCATCTGTTTATCAAACATGTTATTTGAACCTCATAAACTGCTTCCT
AGCATCTGTGATATTGCTACTTTTATAATTGCTACCATAAGCTCATTCTCACACTGAGGA
TTCAGGTTGTTTTTGATGGACCCTCCAAACAAAATCACTATTTTGTGACGTAGCATAACA
TTTGAGAATAATAGGATGTTGCATTTTCTGTTAATA