Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g083180.3.1
CDS Infomation

UPF0548 protein (AHRD V3.3 *** A0A061DGD7_THECC)
Sequence

ATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAG
TCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTA
CTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTA
GTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGCAT
TTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTC
TGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTT
AGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAA
GGACATTTGCTGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTT
TGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCT
TATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACAT
TTATCTGCTTAA

Peptide Sequence

PEP ID

Solyc02g083180.3.1
PEP Infomation

UPF0548 protein (AHRD V3.3 *** A0A061DGD7_THECC)
Sequence

MVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVL
VGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYV
SENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYP
YVLLRQKYFAHQSGSAVKKHLSA*

Transcript Sequence

Transcript ID

Solyc02g083180.3.1
Transcript Infomation

UPF0548 protein (AHRD V3.3 *** A0A061DGD7_THECC)
Sequence

CTCGAGGTAAATCATGCGAGATCAAACTGAAATATTGATTACAAATACCAACCTAAAATA
GTGTGTACTATTTAGCTTATAAAACTCAAATTTGACTTGTTTCATTTTAATTTTATGTTT
AAAAATTTCAATACAAAATAAGTGCCCTAATCAGTTAATCAGTACAGAACCCCAATTCCA
AATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCC
GAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCG
TCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTCTGGTTCCTTTAACTATGATAA
AAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGC
AAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTT
TGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGCATTTTGGATTGAATTGGGCGTTTGT
TGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTT
CCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAA
GGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGCTGGTGAAGA
ACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTC
GAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTA
CTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGG
CTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTT
GGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGC
AATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTG
ATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCA
TTTCAAGAAAGGGTCATTCCATTCTAATGTATATCTCTCTACTTCTCCATCTTCCTTTGA
ATAGCTGTTATTCTTGTTCTGGTGGACCTACAGAAGTGCGAATCTGAGTTCCTTATTCAC
GGGATGGTTAATTACAGTCGTTTCCTAGGCCTCTCCCTCTCCTCCCCTCCCAGAAGAAGA
ATTAAAACAAAACGATCATGTTCATCTGCTTTCTTCTTCATGACTCAAAAGAGAACTTAA
TAAACTGTATAATCAGTTAAAGTAGAAATATACAAACGCAAATCGATTTAGTCGTTAAAA
CTATAGCTATGTAAATGTGCAAACTCTAGCCATTAACTAACACAAAAGAAGCAAAACTAA
TACCAAACGAAGTTCCTAAAATGTTCTGTTCATTAGTCATTAACTAAGACAAAAAAGAAG
CAAAAGCAATACCAAAAGCAATTAAAGGTGAAACGACAACTTAGAAAGTACACAGAGCAA
ATGGATTCTTGCATCTCTTCTTCAATACTTGATCTCTCTTGCTGTATCATCCTTGTTTAT
GTATAGATAATAACGACTCTGCAATTTCCTGTTTGAGTGACAAGTTACAATTAGGCCAAA
CACTTTTAAAAAAATGAAACAACTTTGAAGACTTACATGATCATGTGGATGAGGCTCATC
CTCACCGTTAAGCCAAGATGGTGGTGGCCATAAAATTTCTGCATAATCAAGGGATGATAA
CAGCGATCCAAGTTTACCATCTTCTATGGTAAATACATAGGTGTTATCATCAAATACTCC
TTTGTATCTATCTACCACTACTTCACCTGATTTGCTAGTAGAAGCATTAATCCTGTGATC
ACCATTGCTAATACTGGTGCTGTCACCATAATTGCTAATAGGGTAGCTAATCTCATCACC
ACCAACAACATCATCATCAAGAGGACAACAACAACCACACATACCAAAATCATCGTCACT
GTCTTCATCGTTAAAATACATCGACCCCTTTGCATAGTAAAGGCAGTTTCCTCTACCGTA
CTTATCACCAAAATCACGCGATGAAACAGAGAAGCAACAGTCACTAACAGCAAAGAAAAT
TCGATCACCCAAAGTATGCACTTCAATCCACTCATATTGTTTTTCATCCAATCGGTAAAT
TTTAATTTCATGGCTGGCATCCTTGCCGAAATCTGAACTTTTATCAACCAAAAACAACTG
CCCTCCTGATTCCACCAGTCGTTTCTTCTTCTTACCACCGGATAATCTGGAAGCCACCTC
CTCATCAAACGAGGAATCAATTTTCGTGGTCTCACCATAAAATCTGGAAGCCACCGTCGT
CTCACTAAACGAGGAATCAAATTTCATGGTCTCACCATATCGATCAACAGCATGAAAATT
CCCCTTATATACAATTATATCATCAATGTAAGAACTGGAATTTTTTAACTTAGTCCACTT
GTCATTTCCAGAGTTCAAATAACATAACCGATTATCACGATCAATAGCCATTAAAGAAAA
ACTATCCTTCTCACTCCCTCCATTGTGGTTCATAAGAAGCAAAATTTTCCTAACATAACC
TACATCATAATCACTGAACAAAGGTTTCGACGGAATGTAGTACTGCACATGATAAGATTT
GCAAACCTCAGAAACGCGAAAGTCCAGTAAATTCAATACCTTAGGCATATGATTCTGTAT
TTCCCTGCCTGTCAGTGGATTCAAAACCTTCAATTTTCCATCTGCTGTTTTTATAACCTG
GATCAACCATCCTTTACAAGGCGAATCAATTGAATCTCCGTCAAGTGGTTGAAAAATGTA
AACAGTGCTTTCGATGAGATAGTAACCAGGCCTTCCTTTATAAATGTTACGGTCATCGAG
AGGGTAGGGGATTTCAACAGGAAAATGAGGAACTGTTTTGAAAGGAGCAAGTGATGAACG
CCATGTTGTGCAGACTGAACGGAAGCGAAGAACGTCAATTTGAGTGTCCAGGCAACTACC
GATCCTCTCGGCGAGTTCTTTCGGAAGATCAGACCATGGAACGTACCTTCCACTGCCCAC
AGTTTGCTGCTCCATCAGAGCTTGGATGATAAATTAATGCCCTAGTATTGCTGCTATATA
TTTTGGGGCAGGCGGAGTGAAAACGTGAACCGCTTGGGATCCCTATAACAGTTGTCAACC
CAACGCGGATTCTGCGCATCCGTTATTGTTTTGGCAATAAAATTTATATCCAGCTGGTAA
TTTTTTAAAATACATCCTTTTTCTTTTTTGTATACGCTTATGTGGCTAACAAAATTGTTT
TCCAAAGTTATATTATTTTTTTTAATTGAGAAAATACATTAATTTTTTAAAACTATTTTT
CGAAATAATCTATTAAACGTTAGAGTATAGATTTCTTTTCTATGTGAAT